Contig 009454:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS064F03Sequence612009454 (3)ref|XP_006444298.1|1e-88hypothetical protein CICLE_v100188992mg, partial [Citrus clementina] gb|ESR57538
JMSF036C16Sequence710009454 (3)ref|XP_009598046.1|5e-109PREDICTED: DNA mismatch repair protein PMS1 isoform X3 [Nicotiana tomentosiform766008590 (5)gb|KDP28142.1|2e-116hypothetical protein JCGZ_13913 [Jatropha curcas]
JMSF036E06Sequence669009454 (3)ref|XP_009598046.1|9e-111PREDICTED: DNA mismatch repair protein PMS1 isoform X3 [Nicotiana tomentosiform734008590 (5)gb|KDP28142.1|1e-86hypothetical protein JCGZ_13913 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036E06+ AATCAGAGCATAGGCATTCAACAAAGTGATAAGCTTCCCATATTCCTTGCG
JMSF036C16+ ATCAGAGCATAGGCATTCAACAAAGTGATAAGCTTCCCATATTCCTTGCG
                      ____________________________________________________________
consensus AATCAGAGCATAGGCATTCAACAAAGTGATAAGCTTCCCATATTCCTTGCG
 
. : . : . : . : . : . :
JMSF036E06+ AATGTTGCGATGGAACTCCTTACTTCTTACAGGTAAATTGGAGAATAACTTCTTAATGGT
JMFS064F03+ TGGAGAATAACTTCTTAATGGT
JMSF036C16+ AATGTTGCGATGGAACTCCTTACTTCTTACAGGTAAATTGGAGAATAACTTCTTAATGGT
                      ____________________________________________________________
consensus AATGTTGCGATGGAACTCCTTACTTCTTACAGGTAAATTGGAGAATAACTTCTTAATGGT
 
. : . : . : . : . : . :
JMSF036E06+ GACTGTGGTACCAACTTGCCTTGCGGTCTTTGTTTCTTCTATTAGAAGCCCAGAATGATT
JMFS064F03+ GACTGTGGTACCAACTTGCCTTGCGGTCTTTGTTTCTTCTATTAGAAGCCCAGAATGATT
JMSF036C16+ GACTGTGGTACCAACTTGCCTTGCGGTCTTTGTTTCTTCTATTAGAAGCCCAGAATGATT
                      ____________________________________________________________
consensus GACTGTGGTACCAACTTGCCTTGCGGTCTTTGTTTCTTCTATTAGAAGCCCAGAATGATT
 
. : . : . : . : . : . :
JMSF036E06+ GAAAATCAAGTGTGTTGCCACTGGTTCATTCCTAGTTCTTGTCTCCACAGTTAAATCCCC
JMFS064F03+ GAAAATCAAGTGTGTTGCCACTGGTTCATTCCTAGTTCTTGTCTCCACAGTTAAATCCCC
JMSF036C16+ GAAAATCAAGTGTGTTGCCACTGGTTCATTCCTAGTTCTTGTCTCCACAGTTAAATCCCC
                      ____________________________________________________________
consensus GAAAATCAAGTGTGTTGCCACTGGTTCATTCCTAGTTCTTGTCTCCACAGTTAAATCCCC
 
. : . : . : . : . : . :
JMSF036E06+ TAAAGCACAAAGGGAACTCAATGCCTCCCCTCTGAACCCAAAAGTAGTTAAACTCTGAAG
JMFS064F03+ TAAAGCACAAAGGGAACTCAATGCCTCCCCTCTGAACCCAAAAGTAGTTAAACTCTGAAG
JMSF036C16+ TAAAGCACAAAGGGAACTCAATGCCTCCCCTCTGAACCCAAAAGTAGTTAAAATCTGAAG
                      ____________________________________________________________
consensus TAAAGCACAAAGGGAACTCAATGCCTCCCCTCTGAACCCAAAAGTAGTTAAACTCTGAAG
 
. : . : . : . : . : . :
JMSF036E06+ GTCAGGAAAATCTGATAGCTTTGATGTATGATGCTTCAGAGCGAGAACCTTAAAATTGTG
JMFS064F03+ GTCAGGAAAATCTGATAGCTTTGATGTATGATGCTTCAGAGCGAGAACCTTAAAATTGTG
JMSF036C16+ GTCAGGAAAATCTGATAGCTTTGATGTATGATGCTTCAGAGCGAGAACCTTAAAATTGTG
                      ____________________________________________________________
consensus GTCAGGAAAATCTGATAGCTTTGATGTATGATGCTTCAGAGCGAGAACCTTAAAATTGTG
 
. : . : . : . : . : . :
JMSF036E06+ AGGAGAAATGCCGCAACCATTGTCGATGACCTGGAATGATTCGCCGCCGTAGTCTTTGAG
JMFS064F03+ AGGAGAAATGCCGCAACCATTGTCGATGACCTGGAATGATTCGCCGCCGTAGTCTTTGAG
JMSF036C16+ AGGAGAAATGCCGCAACCATTGTCGATGACCTGGAATGATTCGCCGCCGTAGTCTTTGAG
                      ____________________________________________________________
consensus AGGAGAAATGCCGCAACCATTGTCGATGACCTGGAATGATTCGCCGCCGTAGTCTTTGAG
 
. : . : . : . : . : . :
JMSF036E06+ GGCAACCTCGATGCTGGTGGCGCCGGCGTCTAAGCTGTTCTCCACCAGCTCCTTGACGGC
JMFS064F03+ GGCAACCTCGATGCTGGTGGCGCCGGCGTCTAAGCTGTTCTCCACCAGCTCCTTGACGGC
JMSF036C16+ GGCAACCTCGATGCTGGTGGCGCCGGCGTCTAAGCTGTTCTCCACCAGCTCCTTGACGGC
                      ____________________________________________________________
consensus GGCAACCTCGATGCTGGTGGCGCCGGCGTCTAAGCTGTTCTCCACCAGCTCCTTGACGGC
 
. : . : . : . : . : . :
JMSF036E06+ AGAGGAAAGGTCGAGAATGACTTGGCCAGCACAAATCCGGTGAACGACGCCCTTGTTGAT
JMFS064F03+ AGAGGAAAGGTCGAGAATGACTTGGCCAGCACAAATCCGGTGAACGACGCCCTTGTTGAT
JMSF036C16+ AGAGGAAAGGTCGAGAATGACTTGGCCAGCACAAATCCGGTGAACGACGCCCTTGTTGAT
                      ____________________________________________________________
consensus AGAGGAAAGGTCGAGAATGACTTGGCCAGCACAAATCCGGTGAACGACGCCCTTGTTGAT
 
. : . : . : . : . : . :
JMSF036E06+ GGGCTTGATGGTTGGGGAATCGGAAGATGAAGCTGCTCCTCCCTCCATGCGATTGAGTCT
JMFS064F03+ GGGCTTGATGGTTGGGGAATCGGAAGATGAAGCTGCTCCTCCCTCCATGCGATTGAGTCT
JMSF036C16+ GGGCTTGATGGTTGGGGAATCGGAAGATGAAGCTGCTCCTCCCTCCATGCGATTGAGTCT
                      ____________________________________________________________
consensus GGGCTTGATGGTTGGGGAATCGGAAGATGAAGCTGCTCCTCCCTCCATGCGATTGAGTCT
 
. : . : . : . : . : . :
JMSF036E06+ CACTGTTGTAGGACAGTGACAACCGATCACAAATTCCCCACAGTTCTAAGCTCAATGTGT
JMFS064F03+ CACTGTTGTAGGACAGTGACAACCGATCACAAATTCTCCACAGTTCTAAGCTCAATGTGT
JMSF036C16+ CACTGTTGTAGGACAGTGACAACCGATCACAAATTCTCCACAGTTCTAAGTTCAATGTGT
                      ____________________________________________________________
consensus CACTGTTGTAGGACAGTGACAACCGATCACAAATTCTCCACAGTTCTAAGCTCAATGTGT
 
. : . : . : . : . : . :
JMSF036E06+ AATCTATTGCAGTGCGT
JMFS064F03+ AATCTATTGCAGTGCGTAAATCGTAACTGAAGTCTCCAAAGTA
JMSF036C16+ AATCTATTGCAGTGCGTAAATCGTAACTGAAGTCTCCAAAGTATAATTTCAGTTCAGACC
                      ____________________________________________________________
consensus AATCTATTGCAGTGCGTAAATCGTAACTGAAGTCTCCAAAGTATAATTTCAGTTCAGACC