Contig 009448:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043F21Sequence177009448 (7)195009448 (7)
JMFS025B11Sequence631009448 (7)ref|XP_009605286.1|7e-18PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Nicotiana tomentosiform
JMFS035H05Sequence598009448 (7)
JMFS048G08Sequence571009448 (7)
JMFS094D06Sequence599009448 (7)ref|XP_009773317.1|2e-05PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Nicotiana sylvestris]
JMSF035D08Sequence238009448 (7)331008584 (6)ref|XP_011091271.1|5e-26PREDICTED: 50S ribosomal protein L28, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS025B11+ GGTCCATACACTACATGATCCCCCACCGACATTGAACGTATTT
                      ____________________________________________________________
consensus GGTCCATACACTACATGATCCCCCACCGACATTGAACGTATTT
 
. : . : . : . : . : . :
JMFS025B11+ TTTGAAGCTTTTTGGAGTTAACTTCTCGGATTTTATGTCCACAAACGTTTTCCAAGTCAA
                      ____________________________________________________________
consensus TTTGAAGCTTTTTGGAGTTAACTTCTCGGATTTTATGTCCACAAACGTTTTCCAAGTCAA
 
. : . : . : . : . : . :
JMFS025B11+ CAACTAGATCAACATTGACAACTCTTCCCGTCTGACCAGATGGATCCTTTACTAAACAAA
JMFS094D06+ ATGGATCCTTTACTAAACAAA
                      ____________________________________________________________
consensus CAACTAGATCAACATTGACAACTCTTCCCGTCTGACCAGATGGATCCTTTACTAAACAAA
 
. : . : . : . : . : . :
JMFS025B11+ CTATGTCCCCTTGGGAAAACAGCCTTTCGAAAGAGAGGAAATCATCGATTTTCTCGATGC
JMFS094D06+ CTATGTCCCCTTGGGAAAACAGCCTTTCGAAAGAGAGGAAATCATCGATTTTCTCGATGC
                      ____________________________________________________________
consensus CTATGTCCCCTTGGGAAAACAGCCTTTCGAAAGAGAGGAAATCATCGATTTTCTCGATGC
 
. : . : . : . : . : . :
JMFS025B11+ TTTCCTCGAGGCTAGATAGAATGGAATAAGCATTTCCACCAAATAGGTGTTCAGCATAAT
JMFS094D06+ TTTCCTCGAGGCTAGATAGAATGGAATAAGCATTTCCACCAAATAGGTGTTCAGCATAAT
                      ____________________________________________________________
consensus TTTCCTCGAGGCTAGATAGAATGGAATAAGCATTTCCACCAAATAGGTGTTCAGCATAAT
 
. : . : . : . : . : . :
JMFS025B11+ CCTGATCCTCAGAGTTGCTGCTCTCACTGAAACTATCAATGTCACTCAAGTTCAAATCCA
JMFS094D06+ CCTGATCCTCAGAGTTGCTGCTCTCACTGAAACTATCAATGTCACTCAAGTTCAAATCCA
                      ____________________________________________________________
consensus CCTGATCCTCAGAGTTGCTGCTCTCACTGAAACTATCAATGTCACTCAAGTTCAAATCCA
 
. : . : . : . : . : . :
JMFS025B11+ TAATGTGAAAAAGCCACAAGTGTAACTTCAAGGTCCTTGTCTTTTGATTGTAGCTTTTCC
JMFS094D06+ TAATGTGAAAAAGCCACAAGTGTAACTTCAAGGTCCTTGTCTTTTGATTGTAGCTTTTCC
                      ____________________________________________________________
consensus TAATGTGAAAAAGCCACAAGTGTAACTTCAAGGTCCTTGTCTTTTGATTGTAGCTTTTCC
 
. : . : . : . : . : . :
JMFS025B11+ AAATTGATTGATAGAGATGTTGTCACAACTTTGCTAAACGGTCAAGATAATATATTATAT
JMFS094D06+ AAATTGATTGATAGAGATGTTGTCACAACTTTGCTAAACGGTCAAGATAATATATTATAT
                      ____________________________________________________________
consensus AAATTGATTGATAGAGATGTTGTCACAACTTTGCTAAACGGTCAAGATAATATATTATAT
 
. : . : . : . : . : . :
JMFS025B11+ ATATGCTTTTAAATAATTTGCTTTCTAGATCGATCTGATCTTGTGAAACAGAGATCTAGA
JMFS094D06+ ATATGCTTTTAAATAATTTGCTTTCTAGATCGATCTGATCTTGTGAAACAGAGATCTAGA
                      ____________________________________________________________
consensus ATATGCTTTTAAATAATTTGCTTTCTAGATCGATCTGATCTTGTGAAACAGAGATCTAGA
 
. : . : . : . : . : . :
JMFS025B11+ TAGCGTCCCCAAATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGACTTTTTTT
JMFS094D06+ TAGCGTCCCCAAATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGACTTTTTTT
JMFS035H05+ AATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGAC-TTTTTT
                      ____________________________________________________________
consensus TAGCGTCCCCAAATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGACTTTTTTT
 
. : . : . : . : . : . :
JMFS025B11+ TTTTTGTATTTATGGAATCTACTTAAAGACTCCAAAATGCTAAAGGAA
JMFS094D06+ TTTTTGTATTTATGGAATCTACTTAAAGACTCCAAAATGCTAAAGGAACTTTCCCACAGC
JMFS035H05+ TTTTAGTATTTATGGAATCTACTTANAGACTCCAAAATGCTAAAGGAACTTTCCCACAGC
                      ____________________________________________________________
consensus TTTTTGTATTTATGGAATCTACTTAAAGACTCCAAAATGCTAAAGGAACTTTCCCACAGC
 
. : . : . : . : . : . :
JMFS094D06+ TTAAATGAGTCTGGTATGAAATGCAAATTGAGTTCTTCCTGACACAATTTGAAGTTGAAG
JMFS035H05+ TTAAATGAGTCTGGTATGAAATGCAAATTGAGTTCTTCCTGACACAATTTGAAGTTGAAG
                      ____________________________________________________________
consensus TTAAATGAGTCTGGTATGAAATGCAAATTGAGTTCTTCCTGACACAATTTGAAGTTGAAG
 
. : . : . : . : . : . :
JMFS094D06+ CCCCAGTTC
JMFS035H05+ CCCGAGTTCCCTGCTGAATGACCCGATTCTTTGCTGAACTGGGAATGTAATACCTAAAAG
                      ____________________________________________________________
consensus CCCGAGTTCCCTGCTGAATGACCCGATTCTTTGCTGAACTGGGAATGTAATACCTAAAAG
 
. : . : . : . : . : . :
JMFS035H05+ AACCGCAAAAAGATAACTATCCAACTAGAGGACTTTCAACATTTGCCAAAGGAGATTTGC
                      ____________________________________________________________
consensus AACCGCAAAAAGATAACTATCCAACTAGAGGACTTTCAACATTTGCCAAAGGAGATTTGC
 
. : . : . : . : . : . :
JMFS035H05+ CCAGTTTTCCCTTAAGAAAAACCGATGAAGCAATCAGGTTCACCCGCTGCCAAAGGAGAT
                      ____________________________________________________________
consensus CCAGTTTTCCCTTAAGAAAAACCGATGAAGCAATCAGGTTCACCCGCTGCCAAAGGAGAT
 
. : . : . : . : . : . :
JMFS035H05+ GTATTTGCCTCAGATTAAGGTCTCGATAACCAGAAAAGAGCCAGTTTCCATTGCCTAAAA
                      ____________________________________________________________
consensus GTATTTGCCTCAGATTAAGGTCTCGATAACCAGAAAAGAGCCAGTTTCCATTGCCTAAAA
 
. : . : . : . : . : . :
JMFS035H05+ TGTTCTAAATGCCATAAAGATTTTCATTTCTCAAGCAACCCGGCCAGCAAACTTCAAAAT
JMFS048G08+ CTCAAGCAACCCGGCCAGCAAACTTCAAAAT
                      ____________________________________________________________
consensus TGTTCTAAATGCCATAAAGATTTTCATTTCTCAAGCAACCCGGCCAGCAAACTTCAAAAT
 
. : . : . : . : . : . :
JMFS035H05+ GAAACAAGTTTCTGAAAGCACCAAACTTGGTAGCTAACTAACTCGAGATATCCTGTAGTT
JMFS048G08+ GGAACAAGTTTCTGAAAGCACCAAACTTGGTAGCTAACTAACTCGAGATATCCTGTAGTT
                      ____________________________________________________________
consensus GGAACAAGTTTCTGAAAGCACCAAACTTGGTAGCTAACTAACTCGAGATATCCTGTAGTT
 
. : . : . : . : . : . :
JMFS035H05+ CGAAGCCAATTTGTCAGAATAACCGCTTCTATTCTCAAATACTCTGTATCAAATAACAGC
JMFS048G08+ CGAAGCCAATTTGTCAGAATAACCGCTTCTATTCTCAAATACTCTGTATCAAATAACAGC
                      ____________________________________________________________
consensus CGAAGCCAATTTGTCAGAATAACCGCTTCTATTCTCAAATACTCTGTATCAAATAACAGC
 
. : . : . : . : . : . :
JMFS035H05+ TCGG
JMFS048G08+ TCGGGCTACTTAAAACCATGCACGGTGCTTGTGAAAAACAACCTCTAGTAGGAAAATGAT
                      ____________________________________________________________
consensus TCGGGCTACTTAAAACCATGCACGGTGCTTGTGAAAAACAACCTCTAGTAGGAAAATGAT
 
. : . : . : . : . : . :
JMFS048G08+ CATTTCAAGTGGAAGAAGCTTCTCTTTAGAGAAACCATGGCAGCCCAGAAGCCTCCATAA
                      ____________________________________________________________
consensus CATTTCAAGTGGAAGAAGCTTCTCTTTAGAGAAACCATGGCAGCCCAGAAGCCTCCATAA
 
. : . : . : . : . : . :
JMFS048G08+ AGTAGCTAAAAAGCTGGGAAAGTAAAACAAGCCAACTCGCCAACCTTCTCTCCACTTTCT
                      ____________________________________________________________
consensus AGTAGCTAAAAAGCTGGGAAAGTAAAACAAGCCAACTCGCCAACCTTCTCTCCACTTTCT
 
. : . : . : . : . : . :
JMFS048G08+ CGCAGATTCTTTGACTTTCTGGCGATTTCCTTCACTTTCCCCACXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus CGCAGATTCTTTGACTTTCTGGCGATTTCCTTCACTTTCCCCACNNNNNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFS048G08+ XXXXXXXXXXXXGGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
JMFF043F21+ GGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
rJMFF043F21- GGGGGGGGTTGCGGAGATGATCCGCAAGGAAGAATATAAGAAAGAATA
JMSF035D08+ GGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
                      ____________________________________________________________
consensus NNNNNNNNNNNNGGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
 
. : . : . : . : . : . :
JMFS048G08+ TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
JMFF043F21+ TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
rJMFF043F21- TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
JMSF035D08+ TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
                      ____________________________________________________________
consensus TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
 
. : . : . : . : . : . :
JMFS048G08+ AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
JMFF043F21+ AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
rJMFF043F21- AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
JMSF035D08+ AATCTTGAAAACANTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
                      ____________________________________________________________
consensus AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
 
. : . : . : . : . : . :
JMFF043F21+ CACACACAC
rJMFF043F21- CACACACAC
JMSF035D08+ CACACACACAGTGGGCGTTTGTGCAGGAGAAAAAGTGTCCGTTAATGGAGGATTTGTTTC
                      ____________________________________________________________
consensus CACACACACAGTGGGCGTTTGTGCAGGAGAAAAAGTGTCCGTTAATGGAGGATTTGTTTC