Contig 009410:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030O14Sequence660009410 (2)emb|CDP16541.1|7e-63unnamed protein product [Coffea canephora]684009410 (2)ref|XP_007219233.1|4e-21hypothetical protein PRUPE_ppa017818mg, partial [Prunus persica] gb|EMJ20432.1|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030O14- TATATTCTTCTGCATACAACTA
                      ____________________________________________________________
consensus TATATTCTTCTGCATACAACTA
 
. : . : . : . : . : . :
rJMSF030O14- AGAAAAGGATTCATAAAAAGGTAGATAGTATAGATTTCTACAGTAAATACAATTCAACTC
                      ____________________________________________________________
consensus AGAAAAGGATTCATAAAAAGGTAGATAGTATAGATTTCTACAGTAAATACAATTCAACTC
 
. : . : . : . : . : . :
rJMSF030O14- CATAAACAGTTCGAAGACAAACTATACAACTCATACACACATGAGTTCCACTACTAATCA
                      ____________________________________________________________
consensus CATAAACAGTTCGAAGACAAACTATACAACTCATACACACATGAGTTCCACTACTAATCA
 
. : . : . : . : . : . :
rJMSF030O14- ATGATTTCTCCTTCCTCTTGATTTTCTTCCACTTCGGTGTGACCAACGTTCTGATAAAGT
                      ____________________________________________________________
consensus ATGATTTCTCCTTCCTCTTGATTTTCTTCCACTTCGGTGTGACCAACGTTCTGATAAAGT
 
. : . : . : . : . : . :
rJMSF030O14- AAATCAGCCAGTTCTTTGAATTTATTGTCCTCATCATTGTCGTCATTGAACGGTTCTTCA
                      ____________________________________________________________
consensus AAATCAGCCAGTTCTTTGAATTTATTGTCCTCATCATTGTCGTCATTGAACGGTTCTTCA
 
. : . : . : . : . : . :
rJMSF030O14- ATAGGGAATGCTTGTTCAATGGCCACATTCTGATTCCCTGATTCTTGACCAATCACAGAT
                      ____________________________________________________________
consensus ATAGGGAATGCTTGTTCAATGGCCACATTCTGATTCCCTGATTCTTGACCAATCACAGAT
 
. : . : . : . : . : . :
rJMSF030O14- GGAGATTTCAGAGGTGGGGATGCTTGTTCAATGGCCACATTCTGATTCTCTGATTCTTTA
                      ____________________________________________________________
consensus GGAGATTTCAGAGGTGGGGATGCTTGTTCAATGGCCACATTCTGATTCTCTGATTCTTTA
 
. : . : . : . : . : . :
rJMSF030O14- ACAGTCACAGATGGGGATTTCAGAGGTGGGGATGCTTGTTCAATGGCCACATTCTGATTC
                      ____________________________________________________________
consensus ACAGTCACAGATGGGGATTTCAGAGGTGGGGATGCTTGTTCAATGGCCACATTCTGATTC
 
. : . : . : . : . : . :
rJMSF030O14- TCTGATTCTTTAACAATCACCGATGGAAATTTCAGAGGCTTCTCAGGGCATTCTGTGAAG
JMSF030O14+ TCTGATTCTTTAACAATCACCGATGGAAATTTCAGAGGCTTCTCAGGGCATTCTGTGAAG
                      ____________________________________________________________
consensus TCTGATTCTTTAACAATCACCGATGGAAATTTCAGAGGCTTCTCAGGGCATTCTGTGAAG
 
. : . : . : . : . : . :
rJMSF030O14- AAAGAATTCATAACCATGAACCTAAAAGCTTGCAATAGATGCTGCTTATCTCTTCTAATG
JMSF030O14+ AAAGAATTCATAACCATGAACCTAAAAGCTTGCAATAGATGCTGCTTATCTCTTCTAATG
                      ____________________________________________________________
consensus AAAGAATTCATAACCATGAACCTAAAAGCTTGCAATAGATGCTGCTTATCTCTTCTAATG
 
. : . : . : . : . : . :
rJMSF030O14- TCTGCACCCAGCAGCTTTTGCAAAAGAGTTGGTTTCCTTTTGCTCTGTGAAGCTGAGCCA
JMSF030O14+ TCTGCACCCAGCAGCTTTTGCAAAAGAGTTGGTTTCCTTTTGCTCTGTGAAGCTGAGCCA
                      ____________________________________________________________
consensus TCTGCACCCAGCAGCTTTTGCAAAAGAGTTGGTTTCCTTTTGCTCTGTGAAGCTGAGCCA
 
. : . : . : . : . : . :
rJMSF030O14- CTTTTTTCCAACTTCCGTTCCCTCGACTGGTTGTCATTCTGCTCTTGAATGTTGGATGAA
JMSF030O14+ CTTTTTTCCAACTTCCGTTCCCTCGACTGGTTGTCATTCTGCTCTTGAATGTTGGATGAA
                      ____________________________________________________________
consensus CTTTTTTCCAACTTCCGTTCCCTCGACTGGTTGTCATTCTGCTCTTGAATGTTGGATGAA
 
. : . : . : . : . : . :
rJMSF030O14- TT
JMSF030O14+ TTGGGGTCCTCAAATTTTTGCTTTTTGGAGAACTGGTTCCTTTGACCAAATCGTCCCCTT
                      ____________________________________________________________
consensus TTGGGGTCCTCAAATTTTTGCTTTTTGGAGAACTGGTTCCTTTGACCAAATCGTCCCCTT
 
. : . : . : . : . : . :
JMSF030O14+ TTGTTTGATTTGTATTGGAACTTTTCATTCTTACGGAATGGCCTTCTGTTCTCCCTTTCA
                      ____________________________________________________________
consensus TTGTTTGATTTGTATTGGAACTTTTCATTCTTACGGAATGGCCTTCTGTTCTCCCTTTCA
 
. : . : . : . : . : . :
JMSF030O14+ TGGCCTGGTCTCTCCAAGTCTGACAGATAGGAAGATGGTATTTCTGCAATTTCACAACCT
                      ____________________________________________________________
consensus TGGCCTGGTCTCTCCAAGTCTGACAGATAGGAAGATGGTATTTCTGCAATTTCACAACCT
 
. : . : . : . : . : . :
JMSF030O14+ AGCTCTGCTTGCTTCGCCAAAATTTCCTTCAGTTGCTGGCGGCGTAATCTTGCAGCATTT
                      ____________________________________________________________
consensus AGCTCTGCTTGCTTCGCCAAAATTTCCTTCAGTTGCTGGCGGCGTAATCTTGCAGCATTT
 
. : . : . : . : . : . :
JMSF030O14+ GCATTGTCTTCAGTCCCAGCCAACTTTTGCGAATTCTTCTCAATGTTGGCTTTTGAAGGA
                      ____________________________________________________________
consensus GCATTGTCTTCAGTCCCAGCCAACTTTTGCGAATTCTTCTCAATGTTGGCTTTTGAAGGA
 
. : . : . : . : . : . :
JMSF030O14+ TAATTTTTCCTTCGGTCTTCCCTCCATTGTTGTATTTCTTTCTCAGTGTATAACAAAGGG
                      ____________________________________________________________
consensus TAATTTTTCCTTCGGTCTTCCCTCCATTGTTGTATTTCTTTCTCAGTGTATAACAAAGGG
 
. : . : . : . : . : . :
JMSF030O14+ AGTGGCCTTTGCATACTCTTTTTCTCATTTTGATTTTGGTTCTTGGAGGAATTTTCAGGC
                      ____________________________________________________________
consensus AGTGGCCTTTGCATACTCTTTTTCTCATTTTGATTTTGGTTCTTGGAGGAATTTTCAGGC