Contig 009402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012N11Sequence589009402 (9)gb|AGZ15274.1|2e-15putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum]730009402 (9)ref|XP_009772065.1|2e-68PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris]
JMFN034H19Sequence616009402 (9)ref|NP_001274281.1|6e-52aquaporin SIP1-2-like [Solanum lycopersicum] dbj|BAO18650.1| small basic intrins
JMFN044F05Sequence590009402 (9)gb|AGZ15274.1|7e-42putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum]
JMFS169F12Sequence645009402 (9)ref|NP_001274281.1|3e-84aquaporin SIP1-2-like [Solanum lycopersicum] dbj|BAO18650.1| small basic intrins
JMSF027D03Sequence655009402 (9)gb|AGZ15274.1|5e-25putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum]721009402 (9)ref|XP_009772065.1|7e-80PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris]
JMSF030C01Sequence663009402 (9)gb|AGZ15274.1|5e-25putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum]703009402 (9)ref|XP_009772065.1|8e-80PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027D03- ACTT
rJMFF012N11- TTATTGGATATAAAAATTCCAGTTCAATCAACTT
rJMSF030C01- ACTT
                      ____________________________________________________________
consensus TTATTGGATATAAAAATTCCAGTTCAATCAACTT
 
. : . : . : . : . : . :
rJMSF027D03- ATATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGTCCCCACTTAGCTATCATAA
rJMFF012N11- ACATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGT--CCACTTAGCTATCATAA
rJMSF030C01- ACATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGT--CCACTTAGCTATCATAA
                      ____________________________________________________________
consensus ACATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGT--CCACTTAGCTATCATAA
 
. : . : . : . : . : . :
rJMSF027D03- CTATATAGCAACGATCTAAAACCAGGACAATCAATATATTGAACAGTCCTTTTAGTTCTT
rJMFF012N11- CTATATAGCAACGATCTAAAACCAGGACAATCAATCTATTGAACTGTCTTTTTAGTTCTT
rJMSF030C01- CTATATAGCAACGATCTAAAACCAGGACAATCAATCTATTGAACTGTCTTTTTAGTTCTT
                      ____________________________________________________________
consensus CTATATAGCAACGATCTAAAACCAGGACAATCAATCTATTGAACTGTCTTTTTAGTTCTT
 
. : . : . : . : . : . :
rJMSF027D03- CTTCGCCTTTGGCTGCTTCTTTGGCTTCACCGGTGGTGGAAATATAGCTCGGAACATCCA
rJMFF012N11- CTTCGCCTTTG------------GCTTCACTGGCGGTGGAAATATAGCTCGGAACATCCA
rJMSF030C01- CTTCGCCTTTG------------GCTTCACTGGCGGTGGAAATATAGCTCGGAACATCCA
                      ____________________________________________________________
consensus CTTCGCCTTTG------------GCTTCACTGGCGGTGGAAATATAGCTCGGAACATCCA
 
. : . : . : . : . : . :
rJMSF027D03- CGCCGCCAATATTGCCCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCATGT
rJMFF012N11- CGCCGCCAATATTGCTCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
rJMSF030C01- CGCCGCCAATATTGCTCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
JMFS169F12+ AGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
                      ____________________________________________________________
consensus CGCCGCCAATATTGCTCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
 
. : . : . : . : . : . :
rJMSF027D03- ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
rJMFF012N11- ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
rJMSF030C01- ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
JMFS169F12+ ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
                      ____________________________________________________________
consensus ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
 
. : . : . : . : . : . :
rJMSF027D03- TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
rJMFF012N11- TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
rJMSF030C01- TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
JMFS169F12+ TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
JMFN034H19+ ACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
                      ____________________________________________________________
consensus TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
 
. : . : . : . : . : . :
rJMSF027D03- GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
rJMFF012N11- GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
rJMSF030C01- GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
JMFS169F12+ GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
JMFN034H19+ GACAAATGAATTTNTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
JMFN044F05+ ATGAA
                      ____________________________________________________________
consensus GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
 
. : . : . : . : . : . :
rJMSF027D03- AGTCAAGACTCCCTCAGCAATGGCTCCGATGTGAATGTCAACCTTCAAAGAAGGTCCAAT
rJMFF012N11- AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
rJMSF030C01- AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMFS169F12+ AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMFN034H19+ AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMFN044F05+ AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMSF027D03+ CAAAGAAGGTCCAAT
JMSF030C01+ TCCAAT
                      ____________________________________________________________
consensus AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
 
. : . : . : . : . : . :
rJMSF027D03- AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
rJMFF012N11- AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
rJMSF030C01- AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMFS169F12+ AATCATGTGTTTGAGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMFN034H19+ AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMFN044F05+ AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMSF027D03+ AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMSF030C01+ AATCANGTGTTTGTGATGNGGAGGGATAANTTCCAGAATNGCCA-TGCACCACCAACAGC
                      ____________________________________________________________
consensus AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
 
. : . : . : . : . : . :
rJMSF027D03- ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCGGAGATGAGAGAGTCATCACCGAGGCC
rJMFF012N11- ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
rJMSF030C01- ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMFS169F12+ ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMFN034H19+ ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMFN044F05+ ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMSF027D03+ ACCAGCAGCNTGAGCTGGAAAACGGACGGCGGCGGAGATGAGAGAGTCATCACCGAGGCC
JMFF012N11+ TGAGNTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMSF030C01+ ACCAGCAGCNTGAGNTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
                      ____________________________________________________________
consensus ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
 
. : . : . : . : . : . :
rJMSF027D03- AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGGACATCACT
rJMFF012N11- AGC--CATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
rJMSF030C01- AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMFS169F12+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMFN034H19+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMFN044F05+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMSF027D03+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGGACATCACT
JMFF012N11+ AGC--CATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMSF030C01+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCNGGCGCCGCCGAGAGCATCANT
                      ____________________________________________________________
consensus AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
 
. : . : . : . : . : . :
rJMSF027D03- GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGG
rJMFF012N11- GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAG
rJMSF030C01- GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGA
JMFS169F12+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMFN034H19+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMFN044F05+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMSF027D03+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMFF012N11+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMSF030C01+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
                      ____________________________________________________________
consensus GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
 
. : . : . : . : . : . :
JMFS169F12+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMFN034H19+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMFN044F05+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMSF027D03+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMFF012N11+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMSF030C01+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
                      ____________________________________________________________
consensus CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
 
. : . : . : . : . : . :
JMFS169F12+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMFN034H19+ GGCGGAGAACACCCACAAGAAGGCCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMFN044F05+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMSF027D03+ GGCGGAGAACACCCACATGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMFF012N11+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMSF030C01+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
                      ____________________________________________________________
consensus GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
 
. : . : . : . : . : . :
JMFS169F12+ CATATTCA
JMFN034H19+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMFN044F05+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMSF027D03+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMFF012N11+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMSF030C01+ CA--TTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
                      ____________________________________________________________
consensus CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
 
. : . : . : . : . : . :
JMFN034H19+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTG
JMFN044F05+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
JMSF027D03+ TAGGCACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
JMFF012N11+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
JMSF030C01+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
                      ____________________________________________________________
consensus TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
 
. : . : . : . : . : . :
JMFN044F05+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCC
JMSF027D03+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
JMFF012N11+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
JMSF030C01+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
                      ____________________________________________________________
consensus TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
 
. : . : . : . : . : . :
JMSF027D03+ GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
JMFF012N11+ GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
JMSF030C01+ GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
                      ____________________________________________________________
consensus GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
 
. : . : . : . : . : . :
JMSF027D03+ GGAAAACACGTGATTGGTAGGTCGAACGTAAGATCC
JMFF012N11+ GGAAAACACGTAATTAGTAGGTCGAACGTAAGATCCATGTTCATCTGAAATTGGAAATT
JMSF030C01+ GGAAAACACGTAATTAGTAGGTCGAACGTAAGATCCATGTTCATCTGAAATTGGAAATTC
                      ____________________________________________________________
consensus GGAAAACACGTAATTAGTAGGTCGAACGTAAGATCCATGTTCATCTGAAATTGGAAATTC