| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024A12 | Sequence | 486 | 009387 (10) | ref|XP_009587195.1| | 3e-60 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | 791 | 009387 (10) | emb|CDP00375.1| | 3e-149 | unnamed protein product [Coffea canephora] |
| JMFN015H12 | Sequence | 546 | 009387 (10) | ref|XP_009587195.1| | 3e-83 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | |||||
| JMFS166E06 | Sequence | 630 | 009387 (10) | ref|XP_009587195.1| | 2e-94 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | |||||
| JMSF017L06 | Sequence | 530 | 009387 (10) | ref|XP_009779951.1| | 1e-53 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana s | 786 | 009387 (10) | emb|CDP00375.1| | 3e-141 | unnamed protein product [Coffea canephora] |
| JMSF028J06 | Sequence | 643 | 009387 (10) | ref|XP_009587195.1| | 7e-87 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | 727 | 009387 (10) | emb|CDP00375.1| | 5e-141 | unnamed protein product [Coffea canephora] |
| JMSF041H23 | Sequence | 712 | 009387 (10) | ref|XP_009587195.1| | 5e-113 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | 674 | 009387 (10) | emb|CDP00375.1| | 3e-126 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF017L06- GACTTCATGCCCCACATCCTTGTCCTAAGGGTAAGGAAAGTAGGAAAC
____________________________________________________________
consensus GACTTCATGCCCCACATCCTTGTCCTAAGGGTAAGGAAAGTAGGAAAC
. : . : . : . : . : . :
rJMSF017L06- CCCTTCAAAACAACCATTAATTTGAAATACACCTCTGTTCTAGTTGGGGT----------
rJMSF028J06- AATACAGAATGGTTCTGGTTCCCTTAAAAGTCAAC
rJMFF024A12- AGAAACCTTAAATTCAAATACAGAATGGTTCTGGTTCCCTTAAAAGTCAAC
____________________________________________________________
consensus CCCTTCAAAAGAACCCTTAATTTGAAATACAGAATGGTTCTGGTTCCCTTAAAAGTCAAC
. : . : . : . : . : . :
rJMSF017L06- CAATTTAGACAGTAAACAAGCAAGCTCAAAAAAGCTTGCAATCTAGAACTCAAGCCATTA
rJMSF028J06- TAAATCAAAAAGGAAATATGAAATCAACTCATAAGTTGCAATCTGAAACTCAAGCCATTA
rJMSF041H23- TTGCAATCTGAAACTCAAGCCATTA
rJMFF024A12- TAAATCAAAAAGGAAATATGAAATCAACTCATAAGTTGCAATCTGAAACTCAAGCCATTA
____________________________________________________________
consensus TAAATCAAAAAGGAAATATGAAATCAACTCATAAGTTGCAATCTGAAACTCAAGCCATTA
. : . : . : . : . : . :
rJMSF017L06- TTTTGGCAGATCTTACAAACAAACTGTCAACAACCTTCCCCATATTTGAAATGGTTTCCA
rJMSF028J06- TTTTGGCAGATCTTATGAAAAGACTGTCAACAACCTTCCCCATGTTTGAGATGGTTTCCA
rJMSF041H23- TTTTGGCAGATCTTATGAAAAGACTGTCAACAACCTTCCCCATGTTTGAGATGGTTTCCA
rJMFF024A12- TTTTGGCAGATCTTATGAAAAGACTGTCAACAACCTTCCCCATGTTTGAGATGGTTTCCA
____________________________________________________________
consensus TTTTGGCAGATCTTATGAAAAGACTGTCAACAACCTTCCCCATGTTTGAGATGGTTTCCA
. : . : . : . : . : . :
rJMSF017L06- ATGTCGCAGGATATATGACATCTGTCTTTGGATCGTCAAAAATCACGAGGCACCCAGCAC
rJMSF028J06- ATGTAGCTGGATATATGGCATCTGTCTTGGGATCATCGAAAATTACGAGGCATCCTGCAC
rJMSF041H23- ATGTAGCTGGATATATGGCATCTGTCTTGGGATCATCGAAAATTACGAGGCATCCTGCAC
rJMFF024A12- ATGTAGCTGGATATATGGCATCTGTCTTGGGATCATCGAAAATTACGAGGCATCCTGCAC
____________________________________________________________
consensus ATGTAGCTGGATATATGGCATCTGTCTTGGGATCATCGAAAATTACGAGGCATCCTGCAC
. : . : . : . : . : . :
rJMSF017L06- CTTGGTCGAGAGTTCCAGCAAACTTCTTATCCAAAATCATCTGAGATAACTTCTTTTCAA
rJMSF028J06- CTTGGTCGAGAGTTCCAGCAAACTTCTTATCCAAAATCATCTGGGATAGCTTCTTCTCAA
rJMSF041H23- CTTGGTCGAGAGTTCCAGCAAACTTCTTATCCAAAATCATCTGGGATAGCTTCTTCTCAA
rJMFF024A12- CTTGGTCGAGAGTTCCAGCAAACTTCTTATCCAAAATCATCTGGGATAGCTTCTTCTCAA
____________________________________________________________
consensus CTTGGTCGAGAGTTCCAGCAAACTTCTTATCCAAAATCATCTGGGATAGCTTCTTCTCAA
. : . : . : . : . : . :
rJMSF017L06- CATGGTCAGCAGGCAACTCAATCAACTCAGCAATGTGAGCAATTTCAACCCGGGAGAAAG
rJMSF028J06- CATGGTCAGCGGGCAACTCAATCAACTCAGCAATATGACCGATTTCAACCTTCGAGAAAG
rJMSF041H23- CATGGTCAGCGGGCAACTCAATCAACTCAGCAATATGACCGATTTCAACCTTCGAGAAAG
rJMFF024A12- CATGGTCAGCGGGCAACTCAATCAACTCAGCAATATGACCGATTTCAACCTTCGAGAAAG
____________________________________________________________
consensus CATGGTCAGCGGGCAACTCAATCAACTCAGCAATATGACCGATTTCAACCTTCGAGAAAG
. : . : . : . : . : . :
rJMSF017L06- GCTCAATCAACCTGCAAAGATTTTGCTCCATCAAAGTGTCATAGAGGGAAGAAAGATGCC
rJMSF028J06- GCTCAATCAACCTGCAAAGATTTTGCTCTAACAAAGTGTCATAGAGGGAAGAAAGGTGCC
rJMSF041H23- GCTCAATCAACCTGCAAAGATTTTGCTCTAACAAAGTGTCATAGAGGGAAGAAAGGTGCC
rJMFF024A12- GCTCAATCAACCTGCAAAGATTTTGCTCTAACAAAGTGTCATAGAGGGAAGAAAGGTGCC
____________________________________________________________
consensus GCTCAATCAACCTGCAAAGATTTTGCTCTAACAAAGTGTCATAGAGGGAAGAAAGGTGCC
. : . : . : . : . : . :
rJMSF017L06- GGTGGACAATCTGATCCTCATCTAGCTGGGCCTTGAAATTTCGAAGAGCAACCTCAAAGA
rJMSF028J06- TGTGGACAATGGGATCTTCATCTAGCTGTGTCTTGAAATCTCGAAGAGCAATCTCAAATA
rJMSF041H23- TGTGGACAATGGGATCTTCATCTAGCTGTGTCTTGAAATCTCGAAGAGCAATCTCAAATA
rJMFF024A12- TGTGGACAATGGGATCTTCATCTAGCTGTGTCTTGAAATCTCGAAGAGCAATCTCAAATA
____________________________________________________________
consensus TGTGGACAATGGGATCTTCATCTAGCTGTGTCTTGAAATCTCGAAGAGCAATCTCAAATA
. : . : . : . : . : . :
rJMSF017L06- GCTTCAAAGAGCGTTTTGAGTGAGCATCAGCAACAGCCTTCATAGCATCAAGTTCGGGGC
rJMSF028J06- GCTTCAATGAGCGTTTTGAGTGAGCATCAGCAACAGCTTTCATAGCATCCAGTTCTGGTC
rJMSF041H23- GCTTCAATGAGCGTTTTGAGTGAGCATCAGCAACAGCTTTCATAGCATCCAGTTCTGGTC
rJMFF024A12- GCTTCAATGAGCGTTTTGAGTGAGCATCAGCAACAGCTTTCATAGCATCCAGTTCTGGTC
____________________________________________________________
consensus GCTTCAATGAGCGTTTTGAGTGAGCATCAGCAACAGCTTTCATAGCATCCAGTTCTGGTC
. : . : . : . : . : . :
rJMSF017L06- CTTGATATTGTAATCCCACCTTGGGTGATGATATAATGCTTGCAACATCATCAGCCTGGC
rJMSF028J06- CCTGATACTGCAATCCAACCTTAGGCGATGATATTATGCTTGCTACATCGTCAGCCTGGC
rJMSF041H23- CCTGATACTGCAATCCAACCTTAGGCGATGATATTATGCTTGCTACATCGTCAGCCTGGC
rJMFF024A12- CCTGATACTGCAATCCAACCTTAGGCGATGATATTATGCTTGCTACATCGTCAGCCTGGC
____________________________________________________________
consensus CCTGATACTGCAATCCAACCTTAGGCGATGATATTATGCTTGCTACATCGTCAGCCTGGC
. : . : . : . : . : . :
rJMSF017L06- TCACCATGATCTTGCAAAGCAACATGTACTTGAGGCTGTATATGGCCTGGGGATCTTCGA
rJMSF028J06- TCACCATGATCTTGCAAAGCAACATATATTTGAGGCTATATATGGCCTGTGAATCTTCAA
rJMSF041H23- TCACCATGATCTTGCAAAGCAACATATATTTGAGGCTATATATGGCCTGTGAATCTTCAA
rJMFF024A12- TCACCATGATCTTGCAAAGCAACATATATTTGAGGCTATATATGGCCTGTGAATCTTCAA
____________________________________________________________
consensus TCACCATGATCTTGCAAAGCAACATATATTTGAGGCTATATATGGCCTGTGAATCTTCAA
. : . : . : . : . : . :
rJMSF017L06- GGGCATTGAATGCTTCAAATGCTTCATAGAAATAGCTGTAAGCAGTTTTATANTCCTTCT
rJMSF028J06- GAGCATTAAACGCTTCAAATGCTTCATAAAAATAGCTGTAAGCAGTTTTATAATCTTTCT
rJMSF041H23- GAGCATTAAACGCTTCAAATGCTTCATA
rJMFF024A12- GAGCATTAAACGCTTCAAATGCTTCATAAAAATAGCTGTAAGCAGTTTTATAATCTTTCT
____________________________________________________________
consensus GAGCATTAAACGCTTCAAATGCTTCATAAAAATAGCTGTAAGCAGTTTTATAATCTTTCT
. : . : . : . : . : . :
rJMSF017L06- CNTCTGCATGAAGGATACCACTCTGCAG
rJMSF028J06- CCTCAGCATGAAGGATCCCACTCTG
rJMFF024A12- CCTCAGCATGAAGGATCCCACTCTGCAAATCAATAGAGCCCTGCTGACCTGGANGCACAT
JMSF041H23+ GCAAATCAATAGAGCCCTGCTGACCTGGAGGCACAT
____________________________________________________________
consensus CCTCAGCATGAAGGATCCCACTCTGCAAATCAATAGAGCCCTGCTGACCTGGAGGCACAT
. : . : . : . : . : . :
rJMFF024A12- ATATAGCATTGGCTGCTGTA
JMSF041H23+ ATATAGCATTGGCTGCTGTACGGGCAGCTGTCAGCGCAGCTTTTGCTTTGGGAAGGTTTC
____________________________________________________________
consensus ATATAGCATTGGCTGCTGTACGGGCAGCTGTCAGCGCAGCTTTTGCTTTGGGAAGGTTTC
. : . : . : . : . : . :
JMFS166E06+ CAAGCAACAGCTTGTCAT
JMSF041H23+ TCAACGCAAAATGAAGCTTGCTCTCTAGCAAGTCAATCTCCACAAGCAACAGCTTGTCAT
____________________________________________________________
consensus TCAACGCAAAATGAAGCTTGCTCTCTAGCAAGTCAATCTCCACAAGCAACAGCTTGTCAT
. : . : . : . : . : . :
JMFS166E06+ CCAATCTTCTTACCTCCTTAATCAGCCCTGAAAGGAGTGTCAATGCCTCACCATACTCCT
JMSF041H23+ CCAATCTTCTTACCTCCTTAATCAGCCCTGAAAGGAGTGTCAATGCCTCACCATACTCCT
JMFN015H12+ TTAATCAGCCATGAAAGGAGTGTCAATGCCTCACCATACTCCT
JMSF028J06+ TTAATCAGCCCTGAAAGGAGTGTCAATGCCTCACCATACTCCT
____________________________________________________________
consensus CCAATCTTCTTACCTCCTTAATCAGCCCTGAAAGGAGTGTCAATGCCTCACCATACTCCT
. : . : . : . : . : . :
JMFS166E06+ TGCTTTCCATCAAAAGAGCAGCAAGTCTAGCCTCAATCCTTTGGCGGAGGAAAGTTCGCT
JMSF041H23+ TGCTTTCCATCAAAAGAGCAGCAAGTCTAGCCTCAATCCTTTGGCGGAGGAAAGTTCGCT
JMFN015H12+ TGCTTTCCATCAAAAGAGCAGCAAGTCTAGCTTCAATCCTTTGGCGGAGGAAAGTTCGCT
JMSF017L06+ T
JMSF028J06+ TGCTTTCCATCAAAAGAGCAGCAAGTCTAGCCTCAATCCTTTGGCGGAGGAAAGTTCGCT
____________________________________________________________
consensus TGCTTTCCATCAAAAGAGCAGCAAGTCTAGCCTCAATCCTTTGGCGGAGGAAAGTTCGCT
. : . : . : . : . : . :
JMFS166E06+ TCTCAGCTCGGGTCCACTGCACTATGTCTTTGCAAAGGGCAATCTGAAGATCAGATGTAC
JMSF041H23+ TCTCAGCTCGGGTCCACTGCACTATGTCTTTGCAAAGGGCAATCTGAAGATCAGATGTAC
JMFN015H12+ TCTCAGGTCGGGTCCACTGCGTTATGTCTTTGCAAAGGGCAATCTGAAGATCAGATGTGC
JMFF024A12+ CCACTGCACTATGTCTTTGCAAAGGGCAATCTGAAGATCAGATGTAC
JMSF017L06+ TCTCAGCACGGGTCCACTGCACTATATCTTTGCAAAGGGAAATCTGAAGGTCAGACGTAC
JMSF028J06+ TCTCAGCTCGGGTCCACTGCACTATGTCTTTGCAAAGGGCAATCTGAAGATCAGATGTAC
____________________________________________________________
consensus TCTCAGCTCGGGTCCACTGCACTATGTCTTTGCAAAGGGCAATCTGAAGATCAGATGTAC
. : . : . : . : . : . :
JMFS166E06+ CTGGTATTTTTGACAATGCATCAACAACAACTCGAACAATTTTTGCTGTTTTTGCCTTTG
JMSF041H23+ CTGGTATTTTTGACAATGCATCAACAACAACTCGAACAATTTTTGCTGTTTTTGCCTTTG
JMFN015H12+ CTGGTATTTTTGGCAATGCATCAACATCAACTCGAACAATTTGTGCTGTTTTTGCCTTTG
JMFF024A12+ CTGGTATTTTTGTCAATGCATCAACAACAACTCGAACAATTTTTGCTGTTTTTGCCTTTG
JMSF017L06+ CTGGAATTTTTGCCACTGCATCAACAATTACTCGAACGATTTTAGCTGTCTTTGCCTTGG
JMSF028J06+ CTGGTATTTTTGACAATGCATCAACAACAACTCGAACAATTTTTGCTGTTTTTGCCTTTG
____________________________________________________________
consensus CTGGTATTTTTGACAATGCATCAACAACAACTCGAACAATTTTTGCTGTTTTTGCCTTTG
. : . : . : . : . : . :
JMFS166E06+ GTATCAAAGAAAAGAAGGGTCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCTAT
JMSF041H23+ GTATCAAAGAAAAGAAGGGTCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCTAT
JMFN015H12+ GTATCAAAGAAAAGAAGGGTCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCTAT
JMFF024A12+ GTATCAAAGAAAAGAAGGGTCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCTAT
JMSF017L06+ GGATCAAAGAAAAGAAAGGCCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCGAT
JMSF028J06+ GTATCAAAGAAAAGAAGGGTCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCTAT
____________________________________________________________
consensus GTATCAAAGAAAAGAAGGGTCGCAATTGGGTCAGAAGGTTTTTAAGTTCCTCTGCCCTAT
. : . : . : . : . : . :
JMFS166E06+ TCTCCTGCCTTAGCAGGTCAGAGAGATTGAAGATTGCCTGTTCTTTTATCCTTAAAGCAT
JMSF041H23+ TCTCCTGCCTTAGCAGGTCAGAGAGATTGGAGATTGCCTGTTCTTTTATCCTTAAAGCAT
JMFN015H12+ TCTCCTGCCTTAGCAGGTCAGAGAGATTGGAGATGGCCTGTTCTTTTATCCTTAAAGCAT
JMFF024A12+ TCTCCTGCCTTAGCAGGTCAGAGAGATTGGAGATTGCCTGTTCTTTTATCCTTAAAGCAT
JMSF017L06+ TCTCTTGTCTCAGCAGGTCAGAGAGATTAGAGATTGCTTGCTCTTTGATCCTTAAAGCCT
JMSF028J06+ TCTCCTGCCTTAGCAGGTCAGAGAGATTGGAGATTGCCTGTTCTTTTATCCTTAAAGCAT
____________________________________________________________
consensus TCTCCTGCCTTAGCAGGTCAGAGAGATTGGAGATTGCCTGTTCTTTTATCCTTAAAGCAT
. : . : . : . : . : . :
JMFS166E06+ CAGAAGAAGACGAAGGGTTATTGAGGATGCTGTAAAGGATAGAGAGAGCCTCAGATGGAC
JMSF041H23+ CAGAAGAAGACGAAGGGTTATTGAGGATGCTGTAAAGGATAGAGAGAGCCTCAGATGGAC
JMFN015H12+ CAGAAGAAGACGAAGGGTTATTGAGGATGCTGTAAAGGATAGACAGAGCCTCAGATGGAC
JMFF024A12+ CAGAAGAAGACGAAGGGTTATTGAGGATGCTGTAAAGGATAGAGAGAGCCNCAGATGGAC
JMSF017L06+ CAGAAGAAGATGCAGGGTCATTAAGGATGCGGTAAAGAATGGCAATAGCCTCAGATGGAG
JMSF028J06+ CAGAAGAAGACGAAGGGTTATTGAGGATGCTGTAAAGGATAGAGAGAGCCTCAGATGGAC
____________________________________________________________
consensus CAGAAGAAGACGAAGGGTTATTGAGGATGCTGTAAAGGATAGAGAGAGCCTCAGATGGAC
. : . : . : . : . : . :
JMFS166E06+ TTTTAGCCTCAGAAGC
JMSF041H23+ TTTTAGCCTCAGAAGCCTGAGCAAGTGAATCTGTTGTTGCAGGAAGGTATGATGAAGCCA
JMFN015H12+ TTTTAGCCTCAGAAGCCTGAGCAAGTGAATCTGTTGTTGCAGGAAGGTATGATGAAGCCA
JMFF024A12+ TTTTAGCCTCAGAAGC
JMSF017L06+ TTTTGGCCTCAGAAGC
JMSF028J06+ TTTTAGCCTCAGAAGCCTGAGCAAGTGAATCTGTTGTTGCAGGAAGGTATGATGAAGCCA
____________________________________________________________
consensus TTTTAGCCTCAGAAGCCTGAGCAAGTGAATCTGTTGTTGCAGGAAGGTATGATGAAGCCA
. : . : . : . : . : . :
JMSF041H23+ TGTCCAACAATTTCAGATTACAAGTCGCTGTATTGAAACTTTATTAGCAGTCCAAACTCT
JMFN015H12+ TGTCCATCAATTTCAGATTACAAGTCGCTGTATTGAAACTTTATTAGCAGTCCAAACTCT
JMSF028J06+ TGTCCAACAATTTCAGATTACAAGTCGCTGTATTGAAACTTTATTAGCAGTCCAAACTCT
____________________________________________________________
consensus TGTCCAACAATTTCAGATTACAAGTCGCTGTATTGAAACTTTATTAGCAGTCCAAACTCT
. : . : . : . : . : . :
JMSF041H23+ AAATTGCAACCTCGT
JMFN015H12+ AAATTGCAACCTCGTAAACCCTT
JMSF028J06+ AAATTGCAACCTCGTAAACCCTTTGACTAGGGCAGGGAGAGAAGTAGAGAAAGTTGGATT
____________________________________________________________
consensus AAATTGCAACCTCGTAAACCCTTTGACTAGGGCAGGGAGAGAAGTAGAGAAAGTTGGATT
. : . : . : . : . : . :
JMSF028J06+ CGATTTCTAATAAGTGATTGAGAGAGAATGGGGCTAATCAAGTGTGATTATGTGAGCGTC
____________________________________________________________
consensus CGATTTCTAATAAGTGATTGAGAGAGAATGGGGCTAATCAAGTGTGATTATGTGAGCGTC