Contig 009377:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS022F11Sequence614009377 (3)
JMSF023M08Sequence233009377 (3)752009068 (2)gb|KDP21433.1|7e-05hypothetical protein JCGZ_21904 [Jatropha curcas]
JMSF027L13Sequence672009377 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF027L13+ GATTAAGCGCGATTGAA
                      ____________________________________________________________
consensus GATTAAGCGCGATTGAA
 
. : . : . : . : . : . :
JMFS022F11+ AACGTAGCCCTCGATTTGGGTGCAGTCACCGTCGCTGATCGCTTGTCGCGTTGGAGTTGA
JMSF027L13+ AACGTAGCCCTCGANTTGGGTGCAGTCACCGTCGCTGATCGCTTGTCGCGTTGGAGTTGA
                      ____________________________________________________________
consensus AACGTAGCCCTCGATTTGGGTGCAGTCACCGTCGCTGATCGCTTGTCGCGTTGGAGTTGA
 
. : . : . : . : . : . :
JMFS022F11+ GGTCGAAGGGCTTGAGAAGTGATGGCCAGTGGGCAATGTTCCTCTACGTGAGAATGGTAG
JMSF027L13+ GGTCGAAGGGCTTGAGAAGTGATGGCCAGTGGGCAATGTTCCTCTACGTGAGAATGGTAG
                      ____________________________________________________________
consensus GGTCGAAGGGCTTGAGAAGTGATGGCCAGTGGGCAATGTTCCTCTACGTGAGAATGGTAG
 
. : . : . : . : . : . :
JMFS022F11+ AGATTTGGTTGATCAATTGGGAAAGTTTGATCTGTTCTCTCCAGTCTGGTTTAAGAGTTA
JMSF027L13+ AGATTTGGTTGATCAATTGGGAAAGTTTGATCTGTTCTCTCCAGTCTGGTTTAAGAGTTA
                      ____________________________________________________________
consensus AGATTTGGTTGATCAATTGGGAAAGTTTGATCTGTTCTCTCCAGTCTGGTTTAAGAGTTA
 
. : . : . : . : . : . :
JMFS022F11+ GCGCTTCGAACTGGGCTGATGCCTCCTTAATATGGCACCTTCGGGTTTGGAACCCATTAT
JMSF027L13+ GCGCTTCGAACTGGGCTGATGCCTCCTTAATATGGCACCTTCGGGTTTGGAACCCATTAT
                      ____________________________________________________________
consensus GCGCTTCGAACTGGGCTGATGCCTCCTTAATATGGCACCTTCGGGTTTGGAACCCATTAT
 
. : . : . : . : . : . :
JMFS022F11+ CCAGTGGTAGATCTTGTAATCGATCACTGACGAAGCTTGGAATACTGAGGCCGTCGATCG
JMSF027L13+ CCAGTGGTAGATCTTGTAATCGATCACTGACGAAGCTTGGAATACTGAGGCCGTCGATCG
                      ____________________________________________________________
consensus CCAGTGGTAGATCTTGTAATCGATCACTGACGAAGCTTGGAATACTGAGGCCGTCGATCG
 
. : . : . : . : . : . :
JMFS022F11+ ATCGATTGAGGATGGCGATGATGTTGCTGGACATCAGAGACAGCACCGGACGGCTCCAAG
JMSF027L13+ ATCGATTGAGGATGGCGATGATGTTGCTGGACATCAGAGACAGCACCGGACGGCTCCAAG
                      ____________________________________________________________
consensus ATCGATTGAGGATGGCGATGATGTTGCTGGACATCAGAGACAGCACCGGACGGCTCCAAG
 
. : . : . : . : . : . :
JMFS022F11+ GCTCCATCGCCGCCCTGAAGACAGCGGATCGCCGATGGAGACAAGTTCACGTCAGAATAT
JMSF027L13+ GCTCCATCGCCGCCCTGAAGACAGCGGATCGCCGATGGAGACAAGTTCACGTCAGAATAT
                      ____________________________________________________________
consensus GCTCCATCGCCGCCCTGAAGACAGCGGATCGCCGATGGAGACAAGTTCACGTCAGAATAT
 
. : . : . : . : . : . :
JMFS022F11+ TACGCACCCGATCCAGCTCTTGTTCCACCGAGTTGGGAGGCGGCTGACCCACTTCCATGA
JMSF023M08+ CCCGATCCAGCTNTTGTTCCNCCGAGTTGGGAGGCGGCTGACCCNCTTCCNTGA
JMSF027L13+ TACGCACCCGATCCAGCTCTTGTTCCACCGAGTTGGGAGGCGGCTGACCCACTTCCATGA
                      ____________________________________________________________
consensus TACGCACCCGATCCAGCTCTTGTTCCACCGAGTTGGGAGGCGGCTGACCCACTTCCATGA
 
. : . : . : . : . : . :
JMFS022F11+ TCGCCTCGATGTGACGAAGAAGGTGGACGGAGCCGATCGCCGGTTTGAGGCCCGCCGGCG
JMSF023M08+ TCNCCTTGACGTGACGAAGAAGGTGGACGGAGCCNATNGCCGGTTTGAGGCCCNCCGGCN
JMSF027L13+ TCGCCTCGATGTGACGAAGAAGGTGGACGGAGCCGATCGCCGGTTTGAGGCCCGCCGGCG
                      ____________________________________________________________
consensus TCGCCTCGATGTGACGAAGAAGGTGGACGGAGCCGATCGCCGGTTTGAGGCCCGCCGGCG
 
. : . : . : . : . : . :
JMFS022F11+ CCGGAAATTGCGAAGACGTGGCCGAACTTAG----TTTTTTTGTTTAGAGCAAAGTGCCG
JMSF023M08+ CCGGAAATTGCGAAGGCGTGGCCGAACCTAGTTTTTTTTTTTGTTTAGAGCAAAGTGCCG
JMSF027L13+ CCGGAAATTGCGAAGACGTGGCCGAACTTAG----TTTTTTTGTTTAGAGCAAAGTGCCG
                      ____________________________________________________________
consensus CCGGAAATTGCGAAGACGTGGCCGAACTTAG----TTTTTTTGTTTAGAGCAAAGTGCCG
 
. : . : . : . : . : . :
JMFS022F11+ ATAACGTGTTAAACTAAA
JMSF023M08+ ATAACGTGTTAAACTAAATTAGACAGAGAATGAAGAGGGAAGGCAGCTTATTCTT
JMSF027L13+ ATAACGTGTTAAACTAAATTAGACA-AGAAAGAAGAGGGAAGGCAGCTTATTCTTATTTC
                      ____________________________________________________________
consensus ATAACGTGTTAAACTAAATTAGACAGAGAATGAAGAGGGAAGGCAGCTTATTCTTATTTC