Contig 009370:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037J07Sequence537009370 (3)ref|XP_009771803.1|1e-61PREDICTED: 5-epi-aristolochene synthase-like, partial [Nicotiana sylvestris]766006905 (3)ref|XP_009766331.1|6e-70PREDICTED: 5-epi-aristolochene synthase 2-like [Nicotiana sylvestris]
JMSF027G11Sequence695009370 (3)ref|XP_009771803.1|2e-61PREDICTED: 5-epi-aristolochene synthase-like, partial [Nicotiana sylvestris]818006905 (3)ref|XP_009766331.1|6e-81PREDICTED: 5-epi-aristolochene synthase 2-like [Nicotiana sylvestris]
JMSF034A08Sequence693009370 (3)ref|XP_009771803.1|7e-61PREDICTED: 5-epi-aristolochene synthase-like, partial [Nicotiana sylvestris]775006905 (3)ref|XP_009766331.1|8e-81PREDICTED: 5-epi-aristolochene synthase 2-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034A08+ AAATGAGTTCTTGAAAATGTATAAGCTTCCTTT
JMFF037J07+ CTTGAAAAGGTATAAGCTTCCTTT
JMSF027G11+ CTAAATGAGTTCTTGAAAATGTATAAGCTTCCTTT
                      ____________________________________________________________
consensus CTAAATGAGTTCTTGAAAATGTATAAGCTTCCTTT
 
. : . : . : . : . : . :
JMSF034A08+ AAGATGTCATCTTTATGTCCATTCATGTGAGATGCTTCATATAAGTTCAACAAACCCTTG
JMFF037J07+ AAGATGTCATCTTTATGTCCATCCATGTGAGATGCTTCATATAAGTTCAACAATCCCTTG
JMSF027G11+ AAGATGTCATCTTTATGTCCATTCATGTGAGATGCTTCATATAAGTTCAACAAACCCTTG
                      ____________________________________________________________
consensus AAGATGTCATCTTTATGTCCATTCATGTGAGATGCTTCATATAAGTTCAACAAACCCTTG
 
. : . : . : . : . : . :
JMSF034A08+ ATATCTCTGACAAGATTATTTCTGAATTTTCTATTCTCTTGAAAGCTTTCAAATATTCCT
JMFF037J07+ ATATCTCTGGAAAGATTGTTTCTGAATTTTCCATTCTCTTGAAAATTTTCAAAGATTCCT
JMSF027G11+ ATATCTCTGACAAGATTATTTCTGAATTTTCTATTCTCTTGAAAGCTTTCAAATATTCCT
                      ____________________________________________________________
consensus ATATCTCTGACAAGATTATTTCTGAATTTTCTATTCTCTTGAAAGCTTTCAAATATTCCT
 
. : . : . : . : . : . :
JMSF034A08+ GAAGAGATGTTGTAGCCATGTTGCCTAAGTAATCGAAACATAAGTGCACAAGTGCACAAA
JMFF037J07+ GAAGAGATGTTGTAGCCATGTTGCCTAAGTAATCGAAACATAAGTGCACAAGTGCACAAA
JMSF027G11+ GAAGAGATGTTGTAGCCATGTTGCCTAAGTAATCGAAACATAAGTGCACAAGTGCACAAA
                      ____________________________________________________________
consensus GAAGAGATGTTGTAGCCATGTTGCCTAAGTAATCGAAACATAAGTGCACAAGTGCACAAA
 
. : . : . : . : . : . :
JMSF034A08+ TCATCTCCATGAAATTTGAGATTGGCATTGTAAATCTCTTTCAATATCTCATCAATCTCA
JMFF037J07+ TCATCTCCATGAAATTTGAGATTGGCATTGTATATCTCTTTCAACATCTCATCAATCTCA
JMSF027G11+ TCATCTCCATGAAATTTGAGATTGGCATTGTAAATCTCTTTCAATATCTCATCAATCTCA
                      ____________________________________________________________
consensus TCATCTCCATGAAATTTGAGATTGGCATTGTAAATCTCTTTCAATATCTCATCAATCTCA
 
. : . : . : . : . : . :
JMSF034A08+ CTGTGAAAGTGATATGAAATGCCGATACGTTCAATGATGTCAATAAAGTTGAGTTTTTCA
JMFF037J07+ CTCTGAAAGTGATATGAAATGCCGAGACGTTCAATGGTGTCAATAAAGTTGAGTTTTTCA
JMSF027G11+ CTGTGAAAGTGATATGAAATGCCGATACGTTCAATGATGTCAATAAAGTTGAGTTTTTCA
                      ____________________________________________________________
consensus CTGTGAAAGTGATATGAAATGCCGATACGTTCAATGATGTCAATAAAGTTGAGTTTTTCA
 
. : . : . : . : . : . :
JMSF034A08+ GCCAGCTTGGAGCTCCTAATACGTACTAGCATGCTCCTCACTTGTTCTTTCAACACCTCA
JMFF037J07+ GCCAGCTTGGAGCTCCTAATACGTACCAGCATGCTCCTCACTCGTTCTTTCAACACCTCA
JMSF027G11+ GCCAGCTTGGAGCTCCTAATACGTACTAGCATGCTCCTCACTTGTTCTTTCAACACCTCA
                      ____________________________________________________________
consensus GCCAGCTTGGAGCTCCTAATACGTACTAGCATGCTCCTCACTTGTTCTTTCAACACCTCA
 
. : . : . : . : . : . :
JMSF034A08+ ATCTCTTGTGCATACCTTTTTGCAACTTCATTATCGAAGACGAAGTATCGGAATTCATCA
JMFF037J07+ ATCTCTTGTGCATACCTTTTTGCAACTTCATTATCGAAGACGAAGTATCGGAATTCATCA
JMSF027G11+ ATCTCTTGTGCATACCTTTTTGCAACTTCATTATCGAAGACGAAGTATCGGAATTCATCA
                      ____________________________________________________________
consensus ATCTCTTGTGCATACCTTTTTGCAACTTCATTATCGAAGACGAAGTATCGGAATTCATCA
 
. : . : . : . : . : . :
JMSF034A08+ CCCCACAGGCTTGGGGAGAATTTTGTTACTGCTGGACGGACAACCTCGTTGCTTGTCGCC
JMFF037J07+ CCCCACAGGCTTGGGGAGAATTTCGTGACAGGTGGACGGACAACCTGGTTGCTTGTCGCC
JMSF027G11+ CCCCACAGGCTTGGGGAGAATTTTGTTACTGCTGGACGGACAACCTCGTTGCTTGTCGCC
                      ____________________________________________________________
consensus CCCCACAGGCTTGGGGAGAATTTTGTTACTGCTGGACGGACAACCTCGTTGCTTGTCGCC
 
. : . : . : . : . : . :
JMSF034A08+ ATTTCTAGGAATTTTGGGTATTTTGTTTCTTGTTTTAGTAGTGGGATTTTTTAAGGTTTT
JMFF037J07+ ATTTCTAGGA
JMSF027G11+ ATTTCTAGGAATTTTGGGTATTTTGTTTCTTGTTTTAGTAGTGGGATTTTTTAAGGTTTT
                      ____________________________________________________________
consensus ATTTCTAGGAATTTTGGGTATTTTGTTTCTTGTTTTAGTAGTGGGATTTTTTAAGGTTTT
 
. : . : . : . : . : . :
JMSF034A08+ TGTTGGAGTAATGAGATTTTGGAGTAGAAATTTCCTTTAAATGGCAGGACAAAGTGTATG
JMSF027G11+ TGTTGGAGTAATGAGATTTTGGAGTAGAAATTTCCTTTAAATGGCAGGACAAAGTGTATG
                      ____________________________________________________________
consensus TGTTGGAGTAATGAGATTTTGGAGTAGAAATTTCCTTTAAATGGCAGGACAAAGTGTATG
 
. : . : . : . : . : . :
JMSF034A08+ TTCTACACCACCTAACTGATTTTATCATTTGAAATCTATTGGGACAATAGTCTCCATCCC
JMSF027G11+ TTCTACACCACCTAACTGATTTTATCATTTGAAATCTATTGGGACAATAGTCTCCATCCC
                      ____________________________________________________________
consensus TTCTACACCACCTAACTGATTTTATCATTTGAAATCTATTGGGACAATAGTCTCCATCCC