Contig 009348:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K05Sequence581009348 (6)ref|XP_011099385.1|2e-80PREDICTED: ADP-ribosylation factor-like protein 8B [Sesamum indicum]605009348 (6)ref|XP_009587557.1|5e-90PREDICTED: ADP-ribosylation factor-like protein 8A [Nicotiana tomentosiformis]
JMFF044O11Sequence655009348 (6)ref|XP_009786347.1|2e-122PREDICTED: ADP-ribosylation factor-like protein 8A [Nicotiana sylvestris] ref|X
JMFN019B21Sequence641009348 (6)ref|XP_009786347.1|5e-91PREDICTED: ADP-ribosylation factor-like protein 8A [Nicotiana sylvestris] ref|X
JMSF025H18Sequence658009348 (6)ref|XP_006364410.1|7e-99PREDICTED: ADP-ribosylation factor-like protein 8A-like [Solanum tuberosum]753009348 (6)ref|XP_009587557.1|6e-127PREDICTED: ADP-ribosylation factor-like protein 8A [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF002K05-                     CTGATGCAGAACAGGGCAAGATAAACAAGCTCATGAACAGAAACAGTTG
                      ____________________________________________________________
consensus                        CTGATGCAGAACAGGGCAAGATAAACAAGCTCATGAACAGAAACAGTTG
 
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rJMFF002K05-          ACACTTTTGAATTGACAGAAAATAATTTAGTACTCCATAATTTACTGCACAAGCAGAATA
                      ____________________________________________________________
consensus             ACACTTTTGAATTGACAGAAAATAATTTAGTACTCCATAATTTACTGCACAAGCAGAATA
 
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rJMFF002K05-          CCANAAAAGAAAGAAAAACCCAAATTTCAGTTAACTTAGAAGTACAGGAAAGGAGATTCA
rJMSF025H18-                                                                   TCA
                      ____________________________________________________________
consensus             CCANAAAAGAAAGAAAAACCCAAATTTCAGTTAACTTAGAAGTACAGGAAAGGAGATTCA
 
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rJMFF002K05-          TCCTCAATTCTTTGACTTGGAGTGTTTTACCAGCCAATCAATAACTGAGTCGATGTTGGT
JMFF044O11+                                       ACCAGCCAATCAATAACTGAGTCGATGTTGGT
rJMSF025H18-          TCCTCAATTCTTTGACTTGGAGTGTTTTACCAGCCAATCAATAACTGAGTCGATGTTGGT
                      ____________________________________________________________
consensus             TCCTCAATTCTTTGACTTGGAGTGTTTTACCAGCCAATCAATAACTGAGTCGATGTTGGT
 
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rJMFF002K05-          GGAGTTCTTGCACGATATCATGAAGCAGCAAACCTCTCGATCTTTTATTAATATCAATCC
JMFF044O11+           GGAGTTCTTGCACGATATCATGAAGCAGCAAACCTCTCGATCTTTTATTGATATCAATCC
rJMSF025H18-          GGAGTTCTTGCACGATATCATGAAGCAGCAAACCTCTCGATCTTTTATTGATATCAATCC
                      ____________________________________________________________
consensus             GGAGTTCTTGCACGATATCATGAAGCAGCAAACCTCTCGATCTTTTATTGATATCAATCC
 
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rJMFF002K05-          CATCTGATCANTCAAAGCCTGTTTGGAAAGGGCACCAGGNTTGNCGATTTTGTTGCCCAG
JMFF044O11+           CATCTGATCAGTCAAAGCCTGTTTGGAAAGGGCACCAGGTTTGTCGATTTTGTTGCCCAG
JMFN019B21+                                 TTGGAAAGGGCACCAGGTTGNTCGATTTGTTTGCCCAG
rJMSF025H18-          CATCTGATCAGTCAAAGCCTGTTTGGAAAGGGCACCAGGTTTGTCGATTTTGTTGCCCAG
JMSF025H18+             TCTGATCAGTCAAAGCCTGTTTGGAAAGGGCACCAGGTTTGTCGATTTTGTTGCCCAG
                      ____________________________________________________________
consensus             CATCTGATCAGTCAAAGCCTGTTTGGAAAGGGCACCAGGTTTGTCGATTTTGTTGCCCAG
 
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rJMFF002K05-          GACGAGCAGTGGAATTCCACTCAATGAGGGTTTGCTCATAAGGTCATGAAGCTCGCTTTT
JMFF044O11+           GACGAGCAGTGGAATTCCACTCAATGAGGGTTTGCTCAGAAGGTCATGAAGCTCGCTTTT
JMFN019B21+           GACGAGCAGTGGAATTCCACTCAATGAGGGTTTGCTCAGAAGGTCATGAAGCTCGCTTTT
rJMSF025H18-          GACGAGCAGTGGAATTCCACTCAATGAGGGTTTGCTCAGAAGGTCATGAAGCTCGCTTTT
JMFF002K05+                             ACTCAATGAGGGTTTGCTCAGAAGGTCATGAAGCTCGCTTTT
JMSF025H18+           GACGAGCAGTGGAATTCCACTCAATGAGGGTTTGCTCAGAAGGTCATGAAGCTCGCTTTT
                      ____________________________________________________________
consensus             GACGAGCAGTGGAATTCCACTCAATGAGGGTTTGCTCAGAAGGTCATGAAGCTCGCTTTT
 
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rJMFF002K05-          TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
JMFF044O11+           TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
JMFN019B21+           TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
rJMSF025H18-          TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
JMFF002K05+           TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
JMSF025H18+           TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
                      ____________________________________________________________
consensus             TGAAATGCTGAGGTTGTCATGGTCTGCAGCATCAACAACGTAAACTATTGCTGAAACTGC
 
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rJMFF002K05-          ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
JMFF044O11+           ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
JMFN019B21+           ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
rJMSF025H18-          ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
JMFF002K05+           ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
JMSF025H18+           ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
                      ____________________________________________________________
consensus             ACGGCAATATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCGAGATCCCACAACTT
 
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rJMFF002K05-          TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGNATCATGTC
JMFF044O11+           TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGTATCATGTC
JMFN019B21+           TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGTATCATGTC
rJMSF025H18-          TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGTATCATGTC
JMFF002K05+           TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGTATCATGTC
JMSF025H18+           TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGTATCATGTC
                      ____________________________________________________________
consensus             TATAGTGACATTGCCTTTAGTCACCTTCCGCATATTAAATCCTACCGTTGGTATCATGTC
 
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rJMFF002K05-          TTCACTATATCC                                                
JMFF044O11+           TTCACTATATCCACCAGTAGCAACAACATTAACAAGAGAAGTTTTTCCAGCATTTTGCAA
JMFN019B21+           TTCACTATATCCACCAGTAGCAACAACATTAACAAGAGAAGTTTTTCCAGCATTTTGCAA
rJMSF025H18-          TTCACTATATCCACCAGTAGCAACAACATTAACAAGAGAAGTTTTTCCAGCATTTTGCAA
JMFF002K05+           TTCACTATATCCACCAGTAGCAACAACATTAACAAGAGAAGTTTTTCCAGCATTTTGCAA
JMSF025H18+           TTCACTATATCCACCAGTAGCAACAACATTAACAAGAGAAGTTTTTCCAGCATTTTGCAA
                      ____________________________________________________________
consensus             TTCACTATATCCACCAGTAGCAACAACATTAACAAGAGAAGTTTTTCCAGCATTTTGCAA
 
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JMFF044O11+           TCCTATCAGAGAAAGCTCCATCTCCTGTTTGAAAAATAGGCTTCGGAGCCAATTGAGAAA
JMFN019B21+           TCCTATCAGAGAAAGCTCCATCTCCTGTTTGAAAAATAGGCTTCGGAGCCAATTGAGAAA
rJMSF025H18-          TCCTATCAGAGAAAGCTCCATCTCCTGTTTGAAAAATAGGCTTCGGAGCCAATTGAGAAA
JMFF002K05+           TCCTATCAGAGAAAGCTCCATCTCCTGTTTGAAAAATAGGCTTCGGAGCCAATTGAGAAA
JMSF025H18+           TCCTATCAGAGAAAGCTCCATCTCCTGTTTGAAAAATAGGCTTCGGAGCCAATTGAGAAA
                      ____________________________________________________________
consensus             TCCTATCAGAGAAAGCTCCATCTCCTGTTTGAAAAATAGGCTTCGGAGCCAATTGAGAAA
 
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JMFF044O11+           AGCTTCCCAGAGACCCATGGCCGGAAAAGAGGCGAAGAGATCTGTGAAAAATTGCGCGAA
JMFN019B21+           AGCTTCCCAGAGACCCATGGC                                       
rJMSF025H18-          AGCTTCCCAGAGACCCATGGCCGGAAAAGAGGCGAAGAGATCTGTGAAAAATTGCGCGAA
JMFF002K05+           AGCTTCCCAGAGACCCATGGCCGGAAAAGAGGCGAAGAGATCTGTGAAAAATTGCGCGAA
JMSF025H18+           AGCTTCCCAGAGACCCATGGCCGGAAAAGAGGCGAAGAGATCTGTGAAAAATTGCGCGAA
                      ____________________________________________________________
consensus             AGCTTCCCAGAGACCCATGGCCGGAAAAGAGGCGAAGAGATCTGTGAAAAATTGCGCGAA
 
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JMFF044O11+           TAGAAGAGAGAGATCTCTTTCAACACAGAGAAGAACTCTCCTCTTCT             
rJMSF025H18-          TAGAAGAGAGAGATCTCTTTCAACACAGAGAAGAACTCTCCTCTTCTCTGTGTTAGTTTA
JMFF002K05+           TAGAAGAGAGAGATCTCTTTCAACACAGAGAAGAACTCTCCTCTTCTCTGTGTTAGTTTA
JMSF025H18+           TAGAAGAGAGAGATCTCTTTCAACACAGAGAAGAACTCTCCTCTTCTCTGTGTTAGTTTA
                      ____________________________________________________________
consensus             TAGAAGAGAGAGATCTCTTTCAACACAGAGAAGAACTCTCCTCTTCTCTGTGTTAGTTTA
 
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rJMSF025H18-          ATCCGAC                                                     
JMFF002K05+           ATCCGACGCTTTTCCTTAACGAAAGTTCGTCACTGTTTATGGTTGGTTGGGTCTTACGTA
JMSF025H18+           ATCCGACGCTTTTCCTTAACGAAAGTTCGTCACTGTTTATGGTTGGTTGGGTCTTACGTA
                      ____________________________________________________________
consensus             ATCCGACGCTTTTCCTTAACGAAAGTTCGTCACTGTTTATGGTTGGTTGGGTCTTACGTA
 
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JMFF002K05+           CGTGTGAATGTGCGTACAAAAAAAGATACTACGGACTACCATTTTCATCACTCAT     
JMSF025H18+           CGTGTGAATGTGCGTACAAAAAAAGATACTACGGACTACCATTTTCATCACTCATCGCCC
                      ____________________________________________________________
consensus             CGTGTGAATGTGCGTACAAAAAAAGATACTACGGACTACCATTTTCATCACTCATCGCCC