Contig 009347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024G23Sequence669009347 (2)ref|XP_009760426.1|6e-89PREDICTED: uncharacterized protein LOC104212768 isoform X2 [Nicotiana sylvestri780013971 (2)ref|XP_009339498.1|176PREDICTED: uncharacterized protein LOC103931703 [Pyrus x bretschneideri]
JMSF025G23Sequence609009347 (2)ref|XP_009760426.1|3e-80PREDICTED: uncharacterized protein LOC104212768 isoform X2 [Nicotiana sylvestri759013971 (2)ref|XP_009344003.1|175PREDICTED: uncharacterized protein LOC103935907 [Pyrus x bretschneideri]

Alignment

This contig is upended


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JMSF024G23+                                                              ATCCCATAT
                      ____________________________________________________________
consensus                                                                ATCCCATAT
 
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JMSF024G23+           ACTAAGCTGGCACCCTTCTGTGATGGNTAAGACGGAACTTTCACCCTGACCACCACTCAA
JMSF025G23+                                                              ACCACTCAA
                      ____________________________________________________________
consensus             ACTAAGCTGGCACCCTTCTGTGATGGNTAAGACGGAACTTTCACCCTGACCACCACTCAA
 
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JMSF024G23+           ATTTTGCATAAATGTTAGTGAAGTTGGATACCGCAATGTGCGTAAAGTGCGAAGATGAAT
JMSF025G23+           ATTTTGCATAAATGTTAGTGAAGTTGGATACCGCAATGTGCGTAAAGTGCGAAGATGAAT
                      ____________________________________________________________
consensus             ATTTTGCATAAATGTTAGTGAAGTTGGATACCGCAATGTGCGTAAAGTGCGAAGATGAAT
 
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JMSF024G23+           ATCTTGGTCATAGACATCAACGCTCTTGCCAAAACTGTGTGCAACAGCTGCCATGGACCA
JMSF025G23+           ATCTTGGTCATAGACATCAACGCTCTTGCCAAAACTGTGTGCAACAGCTGCCATGGACCA
                      ____________________________________________________________
consensus             ATCTTGGTCATAGACATCAACGCTCTTGCCAAAACTGTGTGCAACAGCTGCCATGGACCA
 
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JMSF024G23+           CTGAGTTGGATTGAAGCACAGGCCAGCCAGCTACCTTCTCCAACACCACTATCCCGGGGA
JMSF025G23+           CTGAGTTGGATTGAAGCACAGGCCAGCCAGCTACCTTCTCCAACACCACTATCCCGGGGA
                      ____________________________________________________________
consensus             CTGAGTTGGATTGAAGCACAGGCCAGCCAGCTACCTTCTCCAACACCACTATCCCGGGGA
 
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JMSF024G23+           GAGATTGAAAAGGTCAACCTATCAACATCTTCGCCACAAGTTTTTAATTTAGAAACTATA
JMSF025G23+           GAGATTGAAAAGGTCAACCTATCAACATCTTCGCCACAAGTTTTTAATTTAGAAACTATA
                      ____________________________________________________________
consensus             GAGATTGAAAAGGTCAACCTATCAACATCTTCGCCACAAGTTTTTAATTTAGAAACTATA
 
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JMSF024G23+           ACATGTCCATAAGAGTCCACACTTCCTAAAATTGAGCAACCAGTGCTTTCAGTTTCAGCA
JMSF025G23+           ACATGTCCATAAGAGTCCACACTTCCTAAAATTGAGCAACCAGTGCTTTCAGTTTCAGCA
                      ____________________________________________________________
consensus             ACATGTCCATAAGAGTCCACACTTCCTAAAATTGAGCAACCAGTGCTTTCAGTTTCAGCA
 
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JMSF024G23+           AGCACTATGGATTGTATTTCCGAGCGATGAGGGCAGCGGTTGACAACTGCAGAGTCCAGA
JMSF025G23+           AGCACTATGGATTGTATTTCCGAGCGATGAGGGCAGCGGTTGACAACTGCAGAGTCCAGA
                      ____________________________________________________________
consensus             AGCACTATGGATTGTATTTCCGAGCGATGAGGGCAGCGGTTGACAACTGCAGAGTCCAGA
 
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JMSF024G23+           ACCTCTGTTTGCTCAGGAATTAGGAGTTCCTCCTTCCCTAGACCGACTGATGAGTTCCTT
JMSF025G23+           ACCTCTGTTTGCTCAGGAATTAGGAGTTCCTCCTTCCCTAGACCGACTGATGAGTTCCTT
                      ____________________________________________________________
consensus             ACCTCTGTTTGCTCAGGAATTAGGAGTTCCTCCTTCCCTAGACCGACTGATGAGTTCCTT
 
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JMSF024G23+           GTTGAAATAAGGAGTTTGTAAATGCGGCAACCAGAAGCAATATACACCCAACAAGAGTCT
JMSF025G23+           GTTGAAATAAGGAGTTTGTAAATGCGGCAACCAGAAGCAATATACACCCAACAAGAGTCT
                      ____________________________________________________________
consensus             GTTGAAATAAGGAGTTTGTAAATGCGGCAACCAGAAGCAATATACACCCAACAAGAGTCT
 
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JMSF024G23+           CCGTCGGTACCATTGACATGGAGGGCAAGACGAGTGGACTGGAGGCTTCCCGGAGAAGGG
JMSF025G23+           CCGTCGGTACCATTGACATGGAGGGCAAGACGAGTGGACTGGAGGCTTCCCGGAGAAGGG
                      ____________________________________________________________
consensus             CCGTCGGTACCATTGACATGGAGGGCAAGACGAGTGGACTGGAGGCTTCCCGGAGAAGGG
 
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JMSF024G23+           TGCTCGAAGAGGGTGGTCGGAACCACCGCTTTCTTCAAGGTCTTCGCCTCCAACATTCTC
JMSF025G23+           TGCTCGAAGAGGGTGGTCGGAACCACCGCTTTCTTCAAGGTCTTCGCCTCCAACATTCTC
                      ____________________________________________________________
consensus             TGCTCGAAGAGGGTGGTCGGAACCACCGCTTTCTTCAAGGTCTTCGCCTCCAACATTCTC