Contig 009341:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN044F09Sequence546009341 (9)ref|XP_006341438.1|4e-74PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Solan
JMSF001F20Sequence381009341 (9)ref|XP_009765128.1|2e-40PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot753009341 (9)ref|XP_009604635.1|1e-114PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana
JMSF008G06Sequence398009341 (9)ref|XP_009762796.1|8e-14PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot737009341 (9)ref|XP_009604635.1|1e-112PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana
JMSF025B06Sequence636009341 (9)ref|XP_009765128.1|1e-59PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot750009341 (9)ref|XP_009604635.1|8e-118PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana
JMSF025F20Sequence620009341 (9)ref|XP_009765128.1|3e-91PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot721009341 (9)ref|XP_009604635.1|2e-109PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF001F20- TTGATC
                      ____________________________________________________________
consensus TTGATC
 
. : . : . : . : . : . :
rJMSF008G06- GGAGAATTCATAGTTTCATACTACATTTATAAAAATT
rJMSF025F20- GGAGAATTCATAGTTTCATACTACATTTATAAAAATT
rJMSF001F20- TGACACAGGTTTACAGCATCACTGGAGAATTCATAGTTTCATACTACATTTATAAAAATT
rJMSF025B06- TTTCATACTACATTTATAAAAATT
                      ____________________________________________________________
consensus TGACACAGGTTTACAGCATCACTGGAGAATTCATAGTTTCATACTACATTTATAAAAATT
 
. : . : . : . : . : . :
rJMSF008G06- CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
rJMSF025F20- CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACGGTAN
rJMSF001F20- CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
rJMSF025B06- CATGGTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
                      ____________________________________________________________
consensus CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
 
. : . : . : . : . : . :
rJMSF008G06- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
rJMSF025F20- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
rJMSF001F20- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
rJMSF025B06- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
                      ____________________________________________________________
consensus ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
 
. : . : . : . : . : . :
rJMSF008G06- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
rJMSF025F20- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCNCAAGAAA
rJMSF001F20- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
rJMSF025B06- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
                      ____________________________________________________________
consensus GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
 
. : . : . : . : . : . :
rJMSF008G06- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
rJMSF025F20- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
rJMSF001F20- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
rJMSF025B06- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
                      ____________________________________________________________
consensus TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
 
. : . : . : . : . : . :
rJMSF008G06- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
rJMSF025F20- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCNACA
rJMSF001F20- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
rJMSF025B06- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
                      ____________________________________________________________
consensus CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
 
. : . : . : . : . : . :
rJMSF008G06- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
rJMSF025F20- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
rJMSF001F20- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
rJMSF025B06- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
                      ____________________________________________________________
consensus TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
 
. : . : . : . : . : . :
rJMSF008G06- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
rJMSF025F20- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
rJMSF001F20- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
rJMSF025B06- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
                      ____________________________________________________________
consensus GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
 
. : . : . : . : . : . :
rJMSF008G06- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
rJMSF025F20- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
rJMSF001F20- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
rJMSF025B06- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
JMFN044F09+ CCAAAAGCTTCCCCCATAGTTACC
JMSF025F20+ TCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
                      ____________________________________________________________
consensus ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
 
. : . : . : . : . : . :
rJMSF008G06- TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
rJMSF025F20- TGAGAACTCGACTCCGGGTGGTACTCANGCATATTGTTAATAATTGTCAAACGAATTGCC
rJMSF001F20- TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
rJMSF025B06- TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
JMFN044F09+ TGAGAACTCGACTCCGGGTGGTATTCAAGCATATTGCTAATAATTGTCAAATGAATTGCC
JMSF025F20+ TGAGAACTCGACTCCGGGTGGTACTCAAGCATATNGTTAATAATTGTCAAACGAATTGCC
                      ____________________________________________________________
consensus TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
 
. : . : . : . : . : . :
rJMSF008G06- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
rJMSF025F20- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGNANAAGCTTTGGTAATGGCAAACTTG
rJMSF001F20- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
rJMSF025B06- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
JMFN044F09+ TCGAGCAACTCGGGATCCTCAATTTTTCTACCTGTAGAAGCTTTGGTAATGGCAAGCTTG
JMSF025F20+ TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
JMSF025B06+ TTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
                      ____________________________________________________________
consensus TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
 
. : . : . : . : . : . :
rJMSF008G06- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
rJMSF025F20- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
rJMSF001F20- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
rJMSF025B06- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
JMFN044F09+ TGGTGCTTCCCGGATGAATCAAGATAAACATTTGCTTTGCCAACGTTCAGCCCAAGATTT
JMSF025F20+ TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
JMSF001F20+ TTT
JMSF025B06+ TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
                      ____________________________________________________________
consensus TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
 
. : . : . : . : . : . :
rJMSF008G06- TTCAGTGCATTCATCGTAT
rJMSF025F20- TTCAGTGCATTCATCGTA
rJMSF001F20- TTCAGTGCATTCATCGTATCAAGAAGTG
rJMSF025B06- TTCAGTGCATTCATCGTATCAAGAAGTGCCCCANGGCGATCC
JMFN044F09+ TTCAGTGCATTCATAGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGCCCTCAAGT
JMSF025F20+ TTCAGTGCNTTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
JMSF001F20+ TTCAGTGCATTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
JMSF025B06+ TTCAGTGCATTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
                      ____________________________________________________________
consensus TTCAGTGCATTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
 
. : . : . : . : . : . :
JMFN044F09+ ACAGTTGCATCTGGATCTGATTCCAGTTCTAGTATCACTTTGGGAGCTGGTATTTATGCA
JMSF025F20+ ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
JMSF001F20+ ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
JMSF025B06+ ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
                      ____________________________________________________________
consensus ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
 
. : . : . : . : . : . :
JMFN044F09+ GTCTCGGAGCAATTTTGGTCCTCGTCAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF025F20+ GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF008G06+ TTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF001F20+ GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF025B06+ GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
                      ____________________________________________________________
consensus GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
 
. : . : . : . : . : . :
JMFN044F09+ GCATTAAATCCTCACCTATTAGGAAGAATGCAGATTGTGCGAAATGGATCCATAGCAAAA
JMSF025F20+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
JMSF008G06+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATCGATCCATAGCAAAA
JMSF001F20+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
JMSF025B06+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
                      ____________________________________________________________
consensus GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
 
. : . : . : . : . : . :
JMFN044F09+ GAGCAGCTGAAAGCCCCATGACTAGAAAATGGTTGGTTATCAATTACTTTCACGCCACTG
JMSF025F20+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
JMSF008G06+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
JMSF001F20+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
JMSF025B06+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
                      ____________________________________________________________
consensus GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
 
. : . : . : . : . : . :
JMFN044F09+ CAAAGCCCAGAAAAACGCCCGCAAGAAGCCATCACTATAG
JMSF025F20+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
JMSF008G06+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
JMSF001F20+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
JMSF025B06+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
                      ____________________________________________________________
consensus CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
 
. : . : . : . : . : . :
JMSF025F20+ ATAATAATAATAATAA
JMSF008G06+ ATAATAATAATAATAATAGTCTGCAAGAACTAGGGGCTTGAAGATATTTATGTCCTTGGT
JMSF001F20+ ATAATAATAATAATAA
JMSF025B06+ ATAATAATAATAATAATAGTCTGCAAGAACTAGGGGCTTGAAGATATTTATGTCCTTGGT
                      ____________________________________________________________
consensus ATAATAATAATAATAATAGTCTGCAAGAACTAGGGGCTTGAAGATATTTATGTCCTTGGT
 
. : . : . : . : . : . :
JMSF008G06+ TTTGTTGGTATTAGAGGAAGGAGCTGAGGATATGGGTTTTGTGGGGACTAGAGAAGAACC
JMSF025B06+ TTTGTTGGTATTAGAGGAAGGAGCTGAGGATATGGGTTTTGTGGGGACTAGAGAAGAACC
                      ____________________________________________________________
consensus TTTGTTGGTATTAGAGGAAGGAGCTGAGGATATGGGTTTTGTGGGGACTAGAGAAGAACC
 
. : . : . : . : . : . :
JMSF008G06+ ATCTTGTTTCAAGCCAAGTACAAGTTATGGTGGTTTTGCTTGTTGTAGAACT
JMSF025B06+ ATCTTGTTTCAAGCCAAGTACAAGTTATGGTGGTTTTGCTTGTTGTAGAACTAGAATACC
                      ____________________________________________________________
consensus ATCTTGTTTCAAGCCAAGTACAAGTTATGGTGGTTTTGCTTGTTGTAGAACTAGAATACC