Contig 009330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023P11Sequence666009330 (2)ref|XP_011081555.1|2e-49PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130715010117 (14)ref|XP_009621779.1|9e-81PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140
JMSF030C10Sequence650009330 (2)gb|EYU20256.1|3e-57hypothetical protein MIMGU_mgv1a002601mg [Erythranthe guttata]727010117 (14)ref|XP_009621779.1|5e-64PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140

Alignment

This contig is upended


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JMSF030C10+                                                            TCTTCGGGGAT
                      ____________________________________________________________
consensus                                                              TCTTCGGGGAT
 
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JMSF030C10+           CGGTCCAGTCAGTCTGTTGCTATCAATATACATCTCTTCCAAGGTCGTTAAGTTTCCTAG
                      ____________________________________________________________
consensus             CGGTCCAGTCAGTCTGTTGCTATCAATATACATCTCTTCCAAGGTCGTTAAGTTTCCTAG
 
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JMSF030C10+           TTCCGGTGGCAAGGGTCCATTCATATTGTTTGTGGCAAAACTTAAAGTAATCAAAATACT
JMSF023P11+                                                      AAAGTAATCAAAATACT
                      ____________________________________________________________
consensus             TTCCGGTGGCAAGGGTCCATTCATATTGTTTGTGGCAAAACTTAAAGTAATCAAAATACT
 
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JMSF030C10+           GAGATTTCCTATCTCGGGAGGAATTGGACCAGTGAGATTGTTAGTGCCGAAACTCCTGAT
JMSF023P11+           GAGATTTCCTATCTCGGGAGGAATTGGACCAGTGAGATTGTTAGTGCCGAAACTCCTGAT
                      ____________________________________________________________
consensus             GAGATTTCCTATCTCGGGAGGAATTGGACCAGTGAGATTGTTAGTGCCGAAACTCCTGAT
 
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JMSF030C10+           AACCAAGAAAACATGAAAATTGGTTCTTTAAAATTTATATCCATATAGAAAAACTAATAT
JMSF023P11+           AACCAAGAAAACATGAAAATTGGTTCTTTAAAATTTATATCCATATAGAAAAACTAATAT
                      ____________________________________________________________
consensus             AACCAAGAAAACATGAAAATTGGTTCTTTAAAATTTATATCCATATAGAAAAACTAATAT
 
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JMSF030C10+           CAAATCAAATGTTAAGAAAGAATTATATATACAGCCATTTCATCTTTGTTAACTGCCCGA
JMSF023P11+           CAAATCAAATGTTAAGAAAGAATTATATATACAGCCATTTCATCTTTGTTAACTGCCCGA
                      ____________________________________________________________
consensus             CAAATCAAATGTTAAGAAAGAATTATATATACAGCCATTTCATCTTTGTTAACTGCCCGA
 
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JMSF030C10+           TTTCAGGTGGGACAGAGCCATTCAATACATTCTGAGCCAAATTCAAGTCCATCATTTCTT
JMSF023P11+           TTTCAGGTGGGACAGAGCCATTCAATACATTCTGAGCCAAATTCAAGTCCATCATTTCTT
                      ____________________________________________________________
consensus             TTTCAGGTGGGACAGAGCCATTCAATACATTCTGAGCCAAATTCAAGTCCATCATTTCTT
 
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JMSF030C10+           TAAGCACAAACAGTTCTTTAGGAATTTCACCAACAATATCTAAGCCATATATTTTCAAGC
JMSF023P11+           TAAGCACAAACAGTTCTTTAGGAATTTCACCAACAATATCTAAGCCATATATTTTCAAGC
                      ____________________________________________________________
consensus             TAAGCACAAACAGTTCTTTAGGAATTTCACCAACAATATCTAAGCCATATATTTTCAAGC
 
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JMSF030C10+           GATTAATGTGGCAGAAAGTGCCGGAACAATCACAAGCAATCCTGGGATTAGCCTCTAATG
JMSF023P11+           GATTAATGTGGCAGAAAGTGCCGGAACAATCACAAGCAATCCTGGGATTAGCCTCTAATG
                      ____________________________________________________________
consensus             GATTAATGTGGCAGAAAGTGCCGGAACAATCACAAGCAATCCTGGGATTAGCCTCTAATG
 
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JMSF030C10+           GTGCCCAAGAAGCATTTTTGTCGCAAGGCTCAAAACTGCTGAGGTTCACCTTGCTTCTCA
JMSF023P11+           GTGCCCAAGAAGCATTTTTGTCGCAAGGCTCAAAACTGCTGAGGTTCACCTTGCTTCTCA
                      ____________________________________________________________
consensus             GTGCCCAAGAAGCATTTTTGTCGCAAGGCTCAAAACTGCTGAGGTTCACCTTGCTTCTCA
 
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JMSF030C10+           AATTCCAGTGATCAATTATCTTGTTAATAGCAACCACT                      
JMSF023P11+           AATTCCAGTGATCAATTATCTTGTTAATAGCAACCACTTCATTAGGGTCTGTGATATTTG
                      ____________________________________________________________
consensus             AATTCCAGTGATCAATTATCTTGTTAATAGCAACCACTTCATTAGGGTCTGTGATATTTG
 
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JMSF023P11+           ACTGTGCAATAACTGTGTTGAGCAGCCCAAGAACAAAGAAGGAGAAACCCAGAATTCCCC
                      ____________________________________________________________
consensus             ACTGTGCAATAACTGTGTTGAGCAGCCCAAGAACAAAGAAGGAGAAACCCAGAATTCCCC