Contig 009327:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN018M18Sequence612009327 (5)ref|XP_009621089.1|2e-74PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen
JMFN044N14Sequence617009327 (5)ref|XP_009621089.1|2e-86PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen
JMFS046B06Sequence623009327 (5)ref|XP_009621089.1|3e-74PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen
JMSF005J21Sequence333009327 (5)ref|XP_011000468.1|4e-10PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Populus euphratica]145016004
JMSF023I19Sequence609009327 (5)ref|XP_009621089.1|6e-48PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen731024569ref|XP_009621089.1|2e-31PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Nicotiana tomen

Alignment

This contig is upended


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JMFN044N14+                         TGGCTTTCACCTCGCCAAGAGAATGCAGAGATTTCAAGCACTTAGA
                      ____________________________________________________________
consensus                           TGGCTTTCACCTCGCCAAGAGAATGCAGAGATTTCAAGCACTTAGA
 
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JMFN044N14+           ACAGCCTGCAAGACTAGAATAGCCATTTGGGGAGTTACCCAGGCAATTCTTCTCCAGAAT
                      ____________________________________________________________
consensus             ACAGCCTGCAAGACTAGAATAGCCATTTGGGGAGTTACCCAGGCAATTCTTCTCCAGAAT
 
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JMFN044N14+           CTTCACACGTTCGTCGCCGACCAATTTCCCGTCTGGATTTACAGTGAAAGTTTCTGGGCA
JMFN018M18+                                                        GAAAGTTTCTGGGCA
JMFS046B06+                                                        GAAAGTTTCTGGGCA
                      ____________________________________________________________
consensus             CTTCACACGTTCGTCGCCGACCAATTTCCCGTCTGGATTTACAGTGAAAGTTTCTGGGCA
 
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JMFN044N14+           GCTCAGAGGATGAACCCTAATGCCGCAGTAGCAGTACACCATATCACACGTCTCATTGGG
JMFN018M18+           GCTCAGAGGATGAACCCTAATGCCGCAGTAGCAGTACACCATATCACACGTCTCATTGGG
JMFS046B06+           GCTCAGAGGATGAACCCTAATGCCGCAGTAGCAGTACACCATATCACACGTCTCATTGGG
JMSF023I19+                                                             TCTCATTGGG
                      ____________________________________________________________
consensus             GCTCAGAGGATGAACCCTAATGCCGCAGTAGCAGTACACCATATCACACGTCTCATTGGG
 
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JMFN044N14+           CTTCACCAATTCAACGCCTCTGCTCCCCATTGCCTTCTCCAGCGAGTCCACGCAGGTCTC
JMFN018M18+           CTTCACCAATTCAACGCCTCTGCTCCCCATTGCCTTCTCCAGCGAGTCCACGCAGGTCTC
JMFS046B06+           CTTCACCAATTCAACGCCTCTGCTCCCCATTGCCTTCTCCAGCGAGTCCACGCAGGTCTC
JMSF023I19+           CTTCACCAATTCAACGCCTCTGCTCCCCATTGCCTTCTCCAGCGAGTCCACGCAGGTCTC
                      ____________________________________________________________
consensus             CTTCACCAATTCAACGCCTCTGCTCCCCATTGCCTTCTCCAGCGAGTCCACGCAGGTCTC
 
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JMFN044N14+           CGAGTCGTCGGGGAGCACCGGCATGTCGAACGCCGCCGTTTTGGGGATCCTGGCGGTGGC
JMFN018M18+           CGAGTCGTCGGGGAGCACCGGCATGTCGAACGCCGCCGTTTTGGGGATCCTGGCGGTGGC
JMFS046B06+           CGAGTCGTCGGGGAGCACCGGCATGTCGAACGCCGCCGTTTTGGGGATCCTGGCGGTGGC
JMSF023I19+           CGAGTCGTCGGGGAGCACCGGCATGTCGAACGCCGCCGTTTTGGGGATCCTGGCGGTGGC
                      ____________________________________________________________
consensus             CGAGTCGTCGGGGAGCACCGGCATGTCGAACGCCGCCGTTTTGGGGATCCTGGCGGTGGC
 
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JMFN044N14+           CGCGCGGCGGAGCGCGGTTCTGGAATAGGCAGAGTAGAGCCACGCCGCCAGCACGGGGCA
JMFN018M18+           CGCGCGGCGGAGCGCGGTTCTGGAATAGGCAGAGTAGAGCCACGCCGCCAGCACGGGGCA
JMFS046B06+           CGCGCGGCGGAGCGCGGTTCTGGAATAGGCAGAGTAGAGCCACGCCGCCAGCACGGGGCA
JMSF023I19+           CGCGCGGCGGAGCGCGGTTCTGGAATAGGCAGAGTAGAGCCACGCCGCCAGCACGGGGCA
                      ____________________________________________________________
consensus             CGCGCGGCGGAGCGCGGTTCTGGAATAGGCAGAGTAGAGCCACGCCGCCAGCACGGGGCA
 
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JMFN044N14+           GCAACGGGTCCGGTGGAGCTGACCCGGATAAGCATTGGACCCGCATGCAGACTTGATCCC
JMFN018M18+           GCAACGGGTCCGGTGGAGCTGACCCGGATAAGCATTGGACCCGCATGCAGACTTGATCCC
JMFS046B06+           GCAACGGGTCCGGTGGAGNTGACCCGGATAAGCATTGGACCCGCATGCAGACTTGATCCC
JMSF005J21+                                               GGACCCGCATGCAGACTTGATCCC
JMSF023I19+           GCAACGGGTCCGGTGGAGCTGACCCGGATAAGCATTGGACCCGCATGCAGACTTGATCCC
                      ____________________________________________________________
consensus             GCAACGGGTCCGGTGGAGCTGACCCGGATAAGCATTGGACCCGCATGCAGACTTGATCCC
 
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JMFN044N14+           GT-GGAACATCTCCTCCGAGAGGTCGAGCGGGCAGGCGGCGTCGGAGGACTGCTCCGGGA
JMFN018M18+           GT-GGAACATCTCCTCCGAGAGGTCGAGCGGGCAGGCGGCGTCGGAGGACTGCTCCGGGA
JMFS046B06+           GT-GGAACATCTCCTCCGAGAGGTCGAGCGGGCAGGCGGCGTCGGAGGATTGCTCCGGGA
JMSF005J21+           GTGGGAACATCTCNTCCGAGAGGTCGAGCGGGCAGGCGGCGTCGGAGGACTGCTCCGGGA
JMSF023I19+           GT-GGAACATCTCCTCCGAGAGGTCGAGCGGGCAGGCGGCGTCGGAGGACTGCTCCGGGA
                      ____________________________________________________________
consensus             GT-GGAACATCTCCTCCGAGAGGTCGAGCGGGCAGGCGGCGTCGGAGGACTGCTCCGGGA
 
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JMFN044N14+           TGGCCGGGATCGTGGTCGGCGGTGATGGGTTGGGCAAGAATGTCTGGGTTTGAACCGTAT
JMFN018M18+           TGGCCGGGATCGTGGTCGGCGGTGATGGGTTGGGCAAGAATGTCTGGGTTTGAACCGTAT
JMFS046B06+           TGGCCGGGATCGTGGTCGGCGGTGATGGGTTGGGCAAGAATGTCTGGGTTTGAACCGTAT
JMSF005J21+           TGGCCGGGATCGTGGTCGGCGGTGATGGGTTGGGCAAGAATGTCTGGGTTTGAACCGTAT
JMSF023I19+           TGGCCGGGATCGTGGTCGGCGGTGATGGGTTGGGCAAGAATGTCTGGGTTTGAACCGTAT
                      ____________________________________________________________
consensus             TGGCCGGGATCGTGGTCGGCGGTGATGGGTTGGGCAAGAATGTCTGGGTTTGAACCGTAT
 
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JMFN044N14+           CCGGGTCTGGGAAACCCGGAATGGCCATCAAA                            
JMFN018M18+           CCGGGTCTGGGAAACCCGGAATGGCCATCAAAGTGGGTATGGTGGTGAGAAAAAGGAAAG
JMFS046B06+           CCGGGTCTGGGAAACCCGGAATGGCCATCAAAGTGGGTATGGTGGTGAGAAAAAGGAAAG
JMSF005J21+           CCGGGTCTGGGAAACCCGGAATGGCCATCAAAGTGGGTATGGTGGTGAGAAAAAGGAAAG
JMSF023I19+           CCGGGTCTGGGAAACCCGGAATGGCCATCAAAGTGGGTATGGTGGTGAGAAAAAGGAAAG
                      ____________________________________________________________
consensus             CCGGGTCTGGGAAACCCGGAATGGCCATCAAAGTGGGTATGGTGGTGAGAAAAAGGAAAG
 
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JMFN018M18+           TGAAAACATGGTT                                               
JMFS046B06+           TGAAAACATGGTTGAAGA                                          
JMSF005J21+           TGAAAACATGGTTGAAGAACATGGCTTTGGTAATGATAGAAGTGGGGTTTGAGGAAAGGA
JMSF023I19+           TGAAAACATGGTTGAAGAACATGGCTTTGGTAATGATAGAAGTGGGGTTTGAGGAAAGGA
                      ____________________________________________________________
consensus             TGAAAACATGGTTGAAGAACATGGCTTTGGTAATGATAGAAGTGGGGTTTGAGGAAAGGA
 
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JMSF005J21+           TGGGAAGAGATGGAAATGAGAATGGGTGTTGGGTTTTAGTGAGAGTGTATTATATGGAGC
JMSF023I19+           TGGGAAGAGATGGAAATGAGAATGGGTGTTGGGTTTTAGTGAGAGTGTATTATATGGAGC
                      ____________________________________________________________
consensus             TGGGAAGAGATGGAAATGAGAATGGGTGTTGGGTTTTAGTGAGAGTGTATTATATGGAGC
 
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JMSF005J21+           AGAGAAT                                                     
JMSF023I19+           AGAGAATTGAAGATCCAGTAGATGACAGAAATGGTAGATGATTGTGTTTGGCAGAAGTTC
                      ____________________________________________________________
consensus             AGAGAATTGAAGATCCAGTAGATGACAGAAATGGTAGATGATTGTGTTTGGCAGAAGTTC