Contig 009324:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051A05Sequence566009324 (2)ref|XP_004250756.1|5e-35PREDICTED: uncharacterized protein LOC101254056 isoform X2 [Solanum lycopersicu403019193
JMSF023C02Sequence679009324 (2)ref|XP_006352078.1|1e-55PREDICTED: poly(A) RNA polymerase cid11-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF023C02+                                                   CGGTTTCCAACTGATATATC
                      ____________________________________________________________
consensus                                                     CGGTTTCCAACTGATATATC
 
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JMSF023C02+           ACACTCAATCCCAGTTCCACTATCAACAACTTTCAGAACAGGCACAATAGCACGGGTAAT
                      ____________________________________________________________
consensus             ACACTCAATCCCAGTTCCACTATCAACAACTTTCAGAACAGGCACAATAGCACGGGTAAT
 
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JMFF051A05+                                      ACGCTGAAGTATATAAAGCTTCTTTGCAAGCTT
JMSF023C02+           TGGGTTCACACCATAAACATGTCCACTACGCTGAAGTATATAAAGCTTCTTTGCAAGCTT
                      ____________________________________________________________
consensus             TGGGTTCACACCATAAACATGTCCACTACGCTGAAGTATATAAAGCTTCTTTGCAAGCTT
 
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JMFF051A05+           CTGGAGAGTCTGAATCTTCCTGGCACGCGTGATGTCAACCTTTCTAAAATTAACAGATAG
JMSF023C02+           CTTGAGAGTCTGAATCTTCCTGGCACGCGTGATGTCAACCTTTCTAAAATTAACAGATAG
                      ____________________________________________________________
consensus             CTTGAGAGTCTGAATCTTCCTGGCACGCGTGATGTCAACCTTTCTAAAATTAACAGATAG
 
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JMFF051A05+           ATCTAGGTCACTTTTTGCTTCAAACAGATCCATTGTGAAAGACCCAAACTCCACAACACA
JMSF023C02+           ATCTAGGTCACTTTTTGCTTCAAACAGATCCATTGTGAAAGACCCAAACTCCACAACACA
                      ____________________________________________________________
consensus             ATCTAGGTCACTTTTTGCTTCAAACAGATCCATTGTGAAAGACCCAAACTCCACAACACA
 
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JMFF051A05+           AGGAAAATCACCAGAGCAACCATAAATTTCCTTGACAATTTCATTAATTATGCGGACCAA
JMSF023C02+           AGGAAAATCACCAGAGCAACCATAAATTTCCTTGACAATTTCATTAATTATGCGGACCAA
                      ____________________________________________________________
consensus             AGGAAAATCACCAGAGCAACCATAAATTTCCTTGACAATTTCATTAATTATGCGGACCAA
 
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JMFF051A05+           ATCTCTCCGAGCATCATATTCACGTGGTTTAGGGAACAGAACTAAACAAACACCATGAAG
JMSF023C02+           ATCTCTCCGAGCATCATATTCACTTGGTTTAGGGAACAGAACTAAACAAACACCATGAAG
                      ____________________________________________________________
consensus             ATCTCTCCGAGCATCATATTCACTTGGTTTAGGGAACAGAACTAAACAAACACCATGAAG
 
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JMFF051A05+           CAATTCGTCCAACCCATATGACTTTTCCAAGGCTATTTTATACTTGAGCAATGTCTTCCT
JMSF023C02+           CAATTCGTCCAACCCATATGACTTTTCCAAGGCTATTTTATACTTGAGCAATGTCTTCCT
                      ____________________________________________________________
consensus             CAATTCGTCCAACCCATATGACTTTTCCAAGGCTATTTTATACTTGAGCAATGTCTTCCT
 
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JMFF051A05+           CTGGCACTTGGCAGCTTCCTCGCGCAGAACTTCTACTGTAAATGACATGGTCTGGAAGTT
JMSF023C02+           CTGGCACTTGGCAGCTTCCTCGAGCAGAACTTCTACTGTAAATGACATGGTCTGGAAGTT
                      ____________________________________________________________
consensus             CTGGCACTTGGCAGCTTCCTCGCGCAGAACTTCTACTGTAAATGACATGGTCTGGAAGTT
 
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JMFF051A05+           ACAAGCTGATAATATCAATTCACTGTCGTCAGTATTTGTTCGATAACTTCTCTCAGAGGA
JMSF023C02+           ACAAGCTGATAATATCAATTCACTGTCGTCA-AATTTGTTCGATAACTTCTCTCAGAGGA
                      ____________________________________________________________
consensus             ACAAGCTGATAATATCAATTCACTGTCGTCAGTATTTGTTCGATAACTTCTCTCAGAGGA
 
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JMFF051A05+           ACTGCTTCAAAGGCAGTAACTGCTTCGGCGAATCCAGTAATGATTGAACAAGGGCCTGGT
JMSF023C02+           ACTGCTTCAAAGGCAGTAACTGCTTCGGCGAATCCAGTAATGATTGAACAAGGGCCTGGT
                      ____________________________________________________________
consensus             ACTGCTTCAAAGGCAGTAACTGCTTCGGCGAATCCAGTAATGATTGAACAAGGGCCTGGT
 
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JMFF051A05+           CGGCTGTTTTCTTCTCCGCGCTTTGTCTTTTAGAATACTGGGATGGGATTACT       
JMSF023C02+           CGGCTGTTTTCTTCTCCGCGCTTTGTCTTTTAGAATACTGGGATGGGATTACTGCTTTGC
                      ____________________________________________________________
consensus             CGGCTGTTTTCTTCTCCGCGCTTTGTCTTTTAGAATACTGGGATGGGATTACTGCTTTGC