Contig 009322:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016H12Sequence524009322 (2)gb|KHN46534.1|2e-49GTPase-activating protein gyp7 [Glycine soja]750017113ref|XP_010930822.1|2e-18PREDICTED: TBC1 domain family member 15 isoform X2 [Elaeis guineensis]
JMSF022M03Sequence627009322 (2)ref|XP_009760751.1|2e-43PREDICTED: TBC1 domain family member 15-like isoform X2 [Nicotiana sylvestris] 177015033

Alignment

This contig is upended


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JMSF016H12+                                             TAAGAATAGTCAAAAAGTCAAAAATC
                      ____________________________________________________________
consensus                                               TAAGAATAGTCAAAAAGTCAAAAATC
 
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JMSF016H12+           CCTTNGTATGGTAAACAGTAAATAATTCCCTCCAAGGCAAAATTGTAAGGAAGACAGTGT
                      ____________________________________________________________
consensus             CCTTNGTATGGTAAACAGTAAATAATTCCCTCCAAGGCAAAATTGTAAGGAAGACAGTGT
 
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JMSF016H12+           ACCTCCGACGTTGTCTTATCTGATCTCGTTCTCCAAAAGTGCTTTTTGGATCATAACAAC
JMSF022M03+              TCCGACGTTGTCTTATCTGATCTCGTTCTCCAAAAGTGCTTTTTGGATCATAACAAC
                      ____________________________________________________________
consensus             ACCTCCGACGTTGTCTTATCTGATCTCGTTCTCCAAAAGTGCTTTTTGGATCATAACAAC
 
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JMSF016H12+           CCAGTAAAAATTCCCAAACTTCACCTCTAATTGAGGGATGTATCCCCCCACGATAAATTC
JMSF022M03+           CCAGTAAAAATTCCCAAACTTCACCTCTAATTGAGGGATGTATCCCCCCACGATAAATTC
                      ____________________________________________________________
consensus             CCAGTAAAAATTCCCAAACTTCACCTCTAATTGAGGGATGTATCCCCCCACGATAAATTC
 
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JMSF016H12+           TTCTAAGTATTTTGCCAATATTGAGATAACCTTCTGGAGTAAATGAAGCTTCCCATCTCC
JMSF022M03+           TTCTAAGTATTTTGCCAATATTGAGATAACCTTCTGGAGTAAATGAAGCTTCCCATCTCC
                      ____________________________________________________________
consensus             TTCTAAGTATTTTGCCAATATTGAGATAACCTTCTGGAGTAAATGAAGCTTCCCATCTCC
 
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JMSF016H12+           TTGAACTTAGGGTTTTCCCAGCCTTGACTCTAAACTTGGTTTTGGGAACATCCGTGCATT
JMSF022M03+           TTGAACTTAGGGTTTTCCCAGCCTTGACTCTAAACTTGGTTTTGGGAACATCCGTGCATT
                      ____________________________________________________________
consensus             TTGAACTTAGGGTTTTCCCAGCCTTGACTCTAAACTTGGTTTTGGGAACATCCGTGCATT
 
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JMSF016H12+           GAGGCCGGACCTCATAGAATGAATCAGTAGCAGAATCTCCAAGGTCCTTCCACATTACTG
JMSF022M03+           GAGGCCGGACCTCATAGAATGAATCAGTAGCAGAATCTCCAAGGTCCTTCCACATTACTG
                      ____________________________________________________________
consensus             GAGGCCGGACCTCATAGAATGAATCAGTAGCAGAATCTCCAAGGTCCTTCCACATTACTG
 
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JMSF016H12+           AAAGTATCTACAAGAACAATACACAGAGACTCCAATCCCAGCAATTAGCTGCAACTCCCG
JMSF022M03+           AAAGTATCTACAAGAACAATACACAGAGACTCCAATCCCAGCAATTAGCTGCAACTCCTG
                      ____________________________________________________________
consensus             AAAGTATCTACAAGAACAATACACAGAGACTCCAATCCCAGCAATTAGCTGCAACTCCTG
 
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JMSF016H12+           AGCCCAGATCAGAAGAAGAATCAAGAATGGGGGGCCCAGATCACCGCGCCTCTTCGTTGG
JMSF022M03+           AGCCCAGATCAGAAGAAGAATCAAGAATGGGGGGCCCAGATCACCGCGCCTCTTCGTTGG
                      ____________________________________________________________
consensus             AGCCCAGATCAGAAGAAGAATCAAGAATGGGGGGCCCAGATCACCGCGCCTCTTCGTTGG
 
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JMSF016H12+           CAGTTCAGCAGGCTTCTT                                          
JMSF022M03+           CAGTTCAGCAGGCTTCTTGACAGAGATTCAAGAGACCCTTCCAAACCAAAGAGAATATTG
                      ____________________________________________________________
consensus             CAGTTCAGCAGGCTTCTTGACAGAGATTCAAGAGACCCTTCCAAACCAAAGAGAATATTG
 
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JMSF022M03+           AATAAAAAAAGAAAGAAAAAAGATCTCTTTTTTCCTTTTAATTTTTACTTTTTGTAATGG
                      ____________________________________________________________
consensus             AATAAAAAAAGAAAGAAAAAAGATCTCTTTTTTCCTTTTAATTTTTACTTTTTGTAATGG
 
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JMSF022M03+           TGAAAGAGTGATGGTAGCTGAATAAAGATGTTGGTAGTTATGGGCAGTGGCGGTGGTGTC
                      ____________________________________________________________
consensus             TGAAAGAGTGATGGTAGCTGAATAAAGATGTTGGTAGTTATGGGCAGTGGCGGTGGTGTC