Contig 009293:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007P18Sequence565009293 (2)ref|XP_009775022.1|6e-85PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X1 [Nicotian714003954 (2)ref|XP_009775024.1|4e-75PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Nicotian
JMSF020D06Sequence590009293 (2)ref|XP_009775022.1|2e-86PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X1 [Nicotian789003954 (2)ref|XP_009775024.1|3e-93PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Nicotian

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF007P18+ GAATCATTTGTCGATTCATCACTTTTATTTCCACTAGCTGATAGATCA
JMSF020D06+ CTGAATCATTTGTCGATTCATCACTTTTATTTCCACTAGCTGATAGATCA
                      ____________________________________________________________
consensus CTGAATCATTTGTCGATTCATCACTTTTATTTCCACTAGCTGATAGATCA
 
. : . : . : . : . : . :
JMFF007P18+ ACATCTTTCTTCAGACTTGCAGCTTCATCTTGAATTGAATTTAAAAGATCATTGTAATCT
JMSF020D06+ ACATCTTTCTTCAGACTTGCAGCTTCATCTTGAATTGAATTTAAAAGATCATTGTAATCT
                      ____________________________________________________________
consensus ACATCTTTCTTCAGACTTGCAGCTTCATCTTGAATTGAATTTAAAAGATCATTGTAATCT
 
. : . : . : . : . : . :
JMFF007P18+ ATTTTTTCTTCAATAATCAACTCTGCGCTTTTGGGCTTATAAAAGATCCCGCATCCATCT
JMSF020D06+ ATTTTTTCTTCAATAATCAACTCTGCGCTTTTGGGCTTATAAAAGATCCCGCATCCATCT
                      ____________________________________________________________
consensus ATTTTTTCTTCAATAATCAACTCTGCGCTTTTGGGCTTATAAAAGATCCCGCATCCATCT
 
. : . : . : . : . : . :
JMFF007P18+ TTCTTCTGCCCACCTCTTTGAACATAGATACTTGAGTAGCCAAAACTCTCGATATTTTTT
JMSF020D06+ TTCTTCTGCCCACCTCTTTGAACATAGATACTTGAGTAGCCAAAACTCTCGATATTTTTT
                      ____________________________________________________________
consensus TTCTTCTGCCCACCTCTTTGAACATAGATACTTGAGTAGCCAAAACTCTCGATATTTTTT
 
. : . : . : . : . : . :
JMFF007P18+ TTGTAGAAGCTATCGTACTCATCCAGTTCCTGTAAACAAAGAAAATCTGATCCTAGGCCT
JMSF020D06+ TTGTAGAAGCTATCGTACTCATCCAGTTCCTGTAAACAAAGAAAATCTGATCCTAGGCCT
                      ____________________________________________________________
consensus TTGTAGAAGCTATCGTACTCATCCAGTTCCTGTAAACAAAGAAAATCTGATCCTAGGCCT
 
. : . : . : . : . : . :
JMFF007P18+ TTAAGAACAGTCAAGATTGCCTGAGATCGAGCTTTCCACTTGAGACATGGTGACGGAGAG
JMSF020D06+ TTAAGAACAGTCAAGATTGCCTGAGATCGAGCTTTCCACTTGAGACATGGTGACGGAGAG
                      ____________________________________________________________
consensus TTAAGAACAGTCAAGATTGCCTGAGATCGAGCTTTCCACTTGAGACATGGTGACGGAGAG
 
. : . : . : . : . : . :
JMFF007P18+ TGTGGAAATGAAGCACTCTTTACATAAGCCTGAGCCAAAATGTTATAAGACACAAGACTG
JMSF020D06+ TGTGGAAATGAAGCACTCTTTACATAAGCCTGAGCCAAAATGTTATAAGACACAAGACTG
                      ____________________________________________________________
consensus TGTGGAAATGAAGCACTCTTTACATAAGCCTGAGCCAAAATGTTATAAGACACAAGACTG
 
. : . : . : . : . : . :
JMFF007P18+ AATTTGAAACCTTCAGATTTGCTTATTGAAGCAATTTCACTCTTTTCAACAGGAGTGAAC
JMSF020D06+ AATTTGAAACCTTCAGATTTGCTTATTGAAGCAATTTCACTCTTTTCAACAGGAGTGAAC
                      ____________________________________________________________
consensus AATTTGAAACCTTCAGATTTGCTTATTGAAGCAATTTCACTCTTTTCAACAGGAGTGAAC
 
. : . : . : . : . : . :
JMFF007P18+ TTGGGACACAAAGGTTCAGGTGCTGTGCTCATTTTGCTCAAGCAAACCGTTCTATATCTG
JMSF020D06+ TTGGGACACAAAGGTTCAGGTGCTGTGCTCATTTTGCTCAAGCAAACCGTTCTATATCTG
                      ____________________________________________________________
consensus TTGGGACACAAAGGTTCAGGTGCTGTGCTCATTTTGCTCAAGCAAACCGTTCTATATCTG
 
. : . : . : . : . : . :
JMFF007P18+ GAAGATGGACAAGCAAGTGAGAAGCGAGGAATCAAGC
JMSF020D06+ GAAGATGGACAAGCAAGTGAGAAGCGAGGAATCAAGCAGAAGAAAGAGCTCTTCAGCACC
                      ____________________________________________________________
consensus GAAGATGGACAAGCAAGTGAGAAGCGAGGAATCAAGCAGAAGAAAGAGCTCTTCAGCACC