Contig 009287:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F18Sequence445009287 (3)762006785 (3)ref|XP_009609558.1|1e-63PREDICTED: DUF21 domain-containing protein At4g33700 [Nicotiana tomentosiformis
JMFF013E21Sequence600009287 (3)emb|CDX89630.1|1e-46BnaC03g45440D [Brassica napus]667006785 (3)ref|XP_009609558.1|1e-47PREDICTED: DUF21 domain-containing protein At4g33700 [Nicotiana tomentosiformis
JMSF019I18Sequence493009287 (3)809006785 (3)ref|XP_009773885.1|2e-89PREDICTED: DUF21 domain-containing protein At2g14520 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF013E21+ CTCGAGCACACGACTGTGGTAT
                      ____________________________________________________________
consensus CTCGAGCACACGACTGTGGTAT
 
. : . : . : . : . : . :
JMFF013E21+ GATCTCACCAAACAAAAGAATCAAAGTGACAGATATCAGGATAGCACCCCAAGCTGAAAT
                      ____________________________________________________________
consensus GATCTCACCAAACAAAAGAATCAAAGTGACAGATATCAGGATAGCACCCCAAGCTGAAAT
 
. : . : . : . : . : . :
JMFF013E21+ TAGACCATCAAGGAATATTGGAAGCGTCTCCATGGCTGCAGCATTGCAAATTAGGAGTGT
                      ____________________________________________________________
consensus TAGACCATCAAGGAATATTGGAAGCGTCTCCATGGCTGCAGCATTGCAAATTAGGAGTGT
 
. : . : . : . : . : . :
JMFF013E21+ GCATAGCAACAGATGTTGATTTTTCACAACGGGTAATATCTTTGCGGCATGTTTACGATC
                      ____________________________________________________________
consensus GCATAGCAACAGATGTTGATTTTTCACAACGGGTAATATCTTTGCGGCATGTTTACGATC
 
. : . : . : . : . : . :
JMFF013E21+ TTGGGGAGTTCCAGACTTGGCAAGAACTTCAAGATCAACAAGGCTGAGCGACATGAGCCC
JMSF019I18+ CCC
                      ____________________________________________________________
consensus TTGGGGAGTTCCAGACTTGGCAAGAACTTCAAGATCAACAAGGCTGAGCGACATGAGCCC
 
. : . : . : . : . : . :
JMFF013E21+ CAGCGTAAGTCCCGACATTAAACCCGCGAAAGCAACCAGAAGAACGATTACAACGATGTG
JMFF005F18+ ACCAGAAGAACGATTACAACGATGTG
JMSF019I18+ CAGCGTAAGTCCCGACATTAAACCCGCGAAAGCAACCAGAAGAACGATTACAACGATGTG
                      ____________________________________________________________
consensus CAGCGTAAGTCCCGACATTAAACCCGCGAAAGCAACCAGAAGAACGATTACAACGATGTG
 
. : . : . : . : . : . :
JMFF013E21+ AATGAAGAACCCTGTTTCGCAACATTTGTACTCCACCGCCATTCCACACAACAACCCAGA
JMFF005F18+ AATGAAGAACCCTGTTTCGCAACATTTGTACTCCACCGCCATTCCACACAACAACCCAGA
JMSF019I18+ AATGAAGAACCCTGTTTCGCAACATTTGTACTCCACCGCCATTCCACACAACAACCCAGA
                      ____________________________________________________________
consensus AATGAAGAACCCTGTTTCGCAACATTTGTACTCCACCGCCATTCCACACAACAACCCAGA
 
. : . : . : . : . : . :
JMFF013E21+ ACAGTCCTCCTTCAAAACCCTGAGCCCTAAAAGTTAATTCGCTGTTAGAGAATCGATGCC
JMFF005F18+ ACAGTCCTCCTTCAAAACCCTGAGCCCTAAAAGTTAATTCGCTGTTAGAGAATCGATGCC
JMSF019I18+ ACAGTCCTCCTTCAAAACCCTGAGCCCTAAAAGTTAATTCGCTGTTAGAGAATCGATGCC
                      ____________________________________________________________
consensus ACAGTCCTCCTTCAAAACCCTGAGCCCTAAAAGTTAATTCGCTGTTAGAGAATCGATGCC
 
. : . : . : . : . : . :
JMFF013E21+ CCGTAGTCTATCACCTCCATTTCTCACCCTCCCAAGACAAATAGAATCTGGGTTTCACTC
JMFF005F18+ CCGTAGTCTATCACCTCCATTTCTCACCCTCCCAAGACAAATAGAATCTGGGTTTCACTC
JMSF019I18+ CCGTAGTCTATCACCTCCATTTCTCACCCTCCCAAGACAAATAGAATCTGGGTTTCACTC
                      ____________________________________________________________
consensus CCGTAGTCTATCACCTCCATTTCTCACCCTCCCAAGACAAATAGAATCTGGGTTTCACTC
 
. : . : . : . : . : . :
JMFF013E21+ ACAGAGAGACAGAGAGATGAAATTGAGGGGCAAGAAGATAACTTTTTGATGATGGGTTCC
JMFF005F18+ ACAGAGAGACAGAGAGATGAAATTGAGGGGCAAGAAGATAACTTTTTGATGATGGGTTCC
JMSF019I18+ ACAGAGAGACAGAGAGATGAAATTGAGGGGCAAGAAGATAACTTTTTGATGATGGGTTCC
                      ____________________________________________________________
consensus ACAGAGAGACAGAGAGATGAAATTGAGGGGCAAGAAGATAACTTTTTGATGATGGGTTCC
 
. : . : . : . : . : . :
JMFF013E21+ TTTTCCCCCCAGCAACAGAAGCAACGGGCGTATAATAT
JMFF005F18+ TTTTCCCCCCAGCAACAGAAGCAACGGGCGTATAATATGTGAGGGAATATAATATAATAG
JMSF019I18+ TTTTCCCCCCAGCAACAGAAGCAACGGGCGTATAATATGTGAGGGAATATAATATAATAG
                      ____________________________________________________________
consensus TTTTCCCCCCAGCAACAGAAGCAACGGGCGTATAATATGTGAGGGAATATAATATAATAG
 
. : . : . : . : . : . :
JMFF005F18+ AATATGTGTTTGTATCGTGGACAATAATGGTGAAAGTTGAATGGGGGACGTGTGAGCTTC
JMSF019I18+ AATATGTGTTTGTATCGTGGACAATAATGGTGAAAGTTGAATGGGGGACGTGTGAGCTTC
                      ____________________________________________________________
consensus AATATGTGTTTGTATCGTGGACAATAATGGTGAAAGTTGAATGGGGGACGTGTGAGCTTC
 
. : . : . : . : . : . :
JMFF005F18+ CTTGGGATGATGGTGATGAGAGTGTTATATCTATCGTGCTGTGCTGTGGGTTTGACGCT
JMSF019I18+ CTTGGGATGATGGTGATGAGAGTGTTATATCTATCGTGCTGTGCTGTGGGTTTGACGCTT
                      ____________________________________________________________
consensus CTTGGGATGATGGTGATGAGAGTGTTATATCTATCGTGCTGTGCTGTGGGTTTGACGCTT