Contig 009286:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005H18Sequence106009286 (4)
JMSF019I06Sequence636009286 (4)ref|XP_011077851.1|214PREDICTED: uncharacterized protein LOC105161749 [Sesamum indicum]750012590 (2)ref|XP_011004215.1|345PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF034P03Sequence668009286 (4)ref|XP_011077851.1|214PREDICTED: uncharacterized protein LOC105161749 [Sesamum indicum]692012590 (2)ref|XP_011004215.1|345PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF037E13Sequence646009286 (4)ref|XP_004246498.1|221PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]720022603

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037E13+ TTGGAATGTAATCCTCTATTCCCAAACCCACCTCGCCTTC
                      ____________________________________________________________
consensus TTGGAATGTAATCCTCTATTCCCAAACCCACCTCGCCTTC
 
. : . : . : . : . : . :
JMSF037E13+ GCTTTCTATTTCCCTTTGTGTCCCTTCCTCCTGCCCGCCGCCGCCTACCAGGGGGTGCAG
JMSF034P03+ CTGCCCGCCGCCGCCTACCAGGGGGTGCAG
                      ____________________________________________________________
consensus GCTTTCTATTTCCCTTTGTGTCCCTTCCTCCTGCCCGCCGCCGCCTACCAGGGGGTGCAG
 
. : . : . : . : . : . :
JMSF037E13+ CAGCTCGGTCAGCAATGCGGCGGCGGTGGCGCGGTCGCAGGCTGACGTGTGCAGCCGGAG
JMSF034P03+ CAGCTCGGTCAGCAATGCGGCGGCGGTGGCGCGGTCGCAGGCTGACGTGTGCAGCCGGAG
JMSF019I06+ CGGTGGCGCCGTCGCAGGCTGACGTGTGCAGCCGGAG
                      ____________________________________________________________
consensus CAGCTCGGTCAGCAATGCGGCGGCGGTGGCGCGGTCGCAGGCTGACGTGTGCAGCCGGAG
 
. : . : . : . : . : . :
JMSF037E13+ GGCCAGTACCCGCTTGCCGCCGTTCAGGTCGTACACGCTGGCGAAGAAAGTGTCCGCTTC
JMSF034P03+ GGCCAGTACCCGCTTGCCGCCGTTCAGGTCGTACACGCTGGCGAAGAAAGTGTCCGCTTC
JMSF019I06+ GGCCAGTACCCGCTTGCCGCCGTTCAGGTCGTACACGCTGGCGAAGAAAGTGTCCGCTTC
                      ____________________________________________________________
consensus GGCCAGTACCCGCTTGCCGCCGTTCAGGTCGTACACGCTGGCGAAGAAAGTGTCCGCTTC
 
. : . : . : . : . : . :
JMSF037E13+ GGAGTCGGACGAAGGGTCGGGATTGTGCCAGGTGTTGCGATTTAATTCGTGCTCGAGGAT
JMSF034P03+ GGAGTCGGACGAAGGGTCGGGATTGTGCCAGGTGTTGCGATTTAATTCGTGCTCGAGGAT
JMSF019I06+ GGAGTCGGACGAAGGGTCGGGATTGTGCCAGGTGTTGCGATTTAATTCGTGCTCGAGGAT
                      ____________________________________________________________
consensus GGAGTCGGACGAAGGGTCGGGATTGTGCCAGGTGTTGCGATTTAATTCGTGCTCGAGGAT
 
. : . : . : . : . : . :
JMSF037E13+ GAGGTGGAAGTCCGAGATGGAGGAGGGAGCGGCGCGGCGGAGGAGAATCTCGGCCGTTGA
JMSF034P03+ GAGGTGGAAGTCCGAGATGGAGGAGGGAGCGGCGCGGCGGAGGAGAATCTCGGCCGTTGA
JMSF019I06+ GAGGTGGAAGTCCGAGATGGAGGAGGGAGCGGCGCGGCGGAGGAGAATCTCGGCCGTTGA
                      ____________________________________________________________
consensus GAGGTGGAAGTCCGAGATGGAGGAGGGAGCGGCGCGGCGGAGGAGAATCTCGGCCGTTGA
 
. : . : . : . : . : . :
JMSF037E13+ GGAATGATCGAACGGCTGGATTTGGAGGCGAGGAGTGGGGGGAGTGAGGTAAGAGAAGGA
JMSF034P03+ GGAATGATCGAACGGCTGGATTTGGAGGCGAGGAGTGGGGGGAGTGAGGTAAGAGAAGGA
JMSF019I06+ GGAATGATCGAACGGCTGGATTTGGAGGCGAGGAGTGGGGGGAGTGAGGTAAGAGAAGGA
                      ____________________________________________________________
consensus GGAATGATCGAACGGCTGGATTTGGAGGCGAGGAGTGGGGGGAGTGAGGTAAGAGAAGGA
 
. : . : . : . : . : . :
JMSF037E13+ ATTGGTGGCGGCGTGGTAGCGGAGTTTGGAGTTGAGGATTGGGTGGGCAATTTGCAACTT
JMSF034P03+ ATTGGTGGCGGCGTGGTAGCGGAGTTTGGAGTTGAGGATTGGGTGGGCAATTTGCAACTT
JMSF019I06+ ATTGGTGGCGGCGTGGTAGCGGAGTTTGGAGTTGAGGATTGGGTGGGCAATTTGCAACTT
                      ____________________________________________________________
consensus ATTGGTGGCGGCGTGGTAGCGGAGTTTGGAGTTGAGGATTGGGTGGGCAATTTGCAACTT
 
. : . : . : . : . : . :
JMSF037E13+ GAGGAGGGCATTTTCGAGAAGTGGAATATCAACGGGTTTCGATAAGAGGATTGCCAACAC
JMSF034P03+ GAGGAGGGCATTTTCGAGAAGTGGAATATCAACGGGTTTCGATAAGAGGATTGCCAACAC
JMSF019I06+ GAGGAGGGCATTTTCGAGAAGTGGAATATCAACGGGTTTCGATAAGAGGATTGCCAACAC
                      ____________________________________________________________
consensus GAGGAGGGCATTTTCGAGAAGTGGAATATCAACGGGTTTCGATAAGAGGATTGCCAACAC
 
. : . : . : . : . : . :
JMSF037E13+ CGTTATGCCCGTCCCACCGGGCACCGCTCTACACCAGCTATACTCAGTGCCGCCCACCGG
JMSF034P03+ CGTTATGCCCGTCCCACCGGGCACCGCTCTACACCAGCTATACTCAGTGCCGCCCACCGG
JMSF019I06+ CGTTATGCCCGTCCCACCGGGCACCGCTCTACACCAGCTATACTCAGTGCCGCCCACCGG
                      ____________________________________________________________
consensus CGTTATGCCCGTCCCACCGGGCACCGCTCTACACCAGCTATACTCAGTGCCGCCCACCGG
 
. : . : . : . : . : . :
JMSF037E13+ GCGGCTCTTGGGCTGCGCCGCCTTTGCTGCGGCGGCGACGCCGTCTTGCTCCGCCATCAA
JMSF034P03+ GCGGCTCTTGGGCTGCGCCGCCTTTGCTGCGGCGGCGACGCCGTCTTGCTCCGCCATCAA
JMSF005H18+ CCATCAA
JMSF019I06+ GCGGCTCTTGGGCTGCGCCGCCTTTGCTGCGGCGGCGACGCCGTCTTGCTCCGCCATCAA
                      ____________________________________________________________
consensus GCGGCTCTTGGGCTGCGCCGCCTTTGCTGCGGCGGCGACGCCGTCTTGCTCCGCCATCAA
 
. : . : . : . : . : . :
JMSF037E13+ ATCT
JMSF034P03+ ATCTTGAAGTAGAGGCTCGGA-GTTGGAGTGATAAGCTGAGGAAGTAGAGTTGCCTTGAA
JMSF005H18+ ATCTTGAAGTAGAGGCTCGGATGTTGGAGTGATAAGCTGAGGAAGTAGAGTTGCCTTGAA
JMSF019I06+ ATCTTGAAGTAGAGGCTCGGA-GTTGGAGTGATAAGCTGAGGAAGTAGAGTTGCCTTGAA
                      ____________________________________________________________
consensus ATCTTGAAGTAGAGGCTCGGA-GTTGGAGTGATAAGCTGAGGAAGTAGAGTTGCCTTGAA
 
. : . : . : . : . : . :
JMSF034P03+ CTGAAATGGTCAAATGGGGTGCAGCTAGGCAGCTACCT
JMSF005H18+ CTGAAATGGTCAAATGGGGTGCAGCTAGGCAGCTACCT
JMSF019I06+ CTGAAATGGTCAAATGGGGTGCAGCTAGGCAGCTACCTACTGCCTACACGGCTACACACC
                      ____________________________________________________________
consensus CTGAAATGGTCAAATGGGGTGCAGCTAGGCAGCTACCTACTGCCTACACGGCTACACACC