Contig 009268:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014M03Sequence466009268 (5)769004226 (3)emb|CAJ77510.1|3e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF015J05Sequence639009268 (5)778004226 (3)emb|CAJ77510.1|4e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF032D19Sequence732009268 (5)744004226 (3)emb|CAJ77510.1|3e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF039D06Sequence669009268 (5)913024644emb|CAJ77510.1|7e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF051O22Sequence666009268 (5)712023658emb|CAJ77510.1|7e-13putative cadmium/zinc-transporting ATPase [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032D19+ AGAAAAAAAATTGA
                      ____________________________________________________________
consensus AGAAAAAAAATTGA
 
. : . : . : . : . : . :
JMSF051O22+ TGTTAAATAT
JMSF032D19+ TTAATGTCTAGCAACAAAACAGAATTTATACAGCAGTTTTATCAGTTGCATGTTAAATAT
JMSF039D06+ TGTTAAATAT
                      ____________________________________________________________
consensus TTAATGTCTAGCAACAAAACAGAATTTATACAGCAGTTTTATCAGTTGCATGTTAAATAT
 
. : . : . : . : . : . :
JMSF051O22+ TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
JMSF032D19+ TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
JMSF039D06+ TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
JMSF015J05+ TCATAGTTATATCAAAACCNTAATTCACATAAATAATCAT
                      ____________________________________________________________
consensus TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
 
. : . : . : . : . : . :
JMSF051O22+ AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
JMSF032D19+ AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
JMSF014M03+ CTTAAAGAGGAATGCAAATACATAAACA
JMSF039D06+ AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
JMSF015J05+ AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
                      ____________________________________________________________
consensus AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
 
. : . : . : . : . : . :
JMSF051O22+ AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF032D19+ AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF014M03+ AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF039D06+ AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF015J05+ AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
                      ____________________________________________________________
consensus AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
 
. : . : . : . : . : . :
JMSF051O22+ TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF032D19+ TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF014M03+ TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF039D06+ TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF015J05+ TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
                      ____________________________________________________________
consensus TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
 
. : . : . : . : . : . :
JMSF051O22+ TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF032D19+ TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF014M03+ TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF039D06+ TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF015J05+ TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
                      ____________________________________________________________
consensus TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
 
. : . : . : . : . : . :
JMSF051O22+ GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF032D19+ GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF014M03+ GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF039D06+ GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF015J05+ GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
                      ____________________________________________________________
consensus GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
 
. : . : . : . : . : . :
JMSF051O22+ TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF032D19+ TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF014M03+ TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF039D06+ TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF015J05+ TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
                      ____________________________________________________________
consensus TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
 
. : . : . : . : . : . :
JMSF051O22+ ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
JMSF032D19+ ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
JMSF014M03+ ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACTTAGA
JMSF039D06+ ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
JMSF015J05+ ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
                      ____________________________________________________________
consensus ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
 
. : . : . : . : . : . :
JMSF051O22+ GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
JMSF032D19+ GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
JMSF039D06+ GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
JMSF015J05+ GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTAC-AAAAACCATATTTTAC
                      ____________________________________________________________
consensus GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
 
. : . : . : . : . : . :
JMSF051O22+ CTACCATTT---CAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
JMSF032D19+ CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
JMSF039D06+ CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
JMSF015J05+ CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
                      ____________________________________________________________
consensus CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
 
. : . : . : . : . : . :
JMSF051O22+ CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTAT
JMSF032D19+ CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTAT
JMSF039D06+ CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTAT
JMSF015J05+ CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTATCTGCC
                      ____________________________________________________________
consensus CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTATCTGCC