Contig 009259:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007O20Sequence520009259 (5)gb|KDO70851.1|3e-07hypothetical protein CISIN_1g0074091mg, partial [Citrus sinensis] gb|KDO70852.1|826011048 (3)ref|XP_009780774.1|3e-108PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana sylv
JMFF020H07Sequence551009259 (5)ref|XP_003521518.1|2e-12PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Glycine max] g750011048 (3)ref|XP_009780774.1|7e-108PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana sylv
JMFF022O23Sequence499009259 (5)749016964ref|XP_009780774.1|9e-106PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana sylv
JMSF013P10Sequence314009259 (5)755011048 (3)ref|XP_009594545.1|2e-101PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana tome
JMSF051I10Sequence646009259 (5)ref|XP_010101080.1|1e-39hypothetical protein L484_007315 [Morus notabilis] gb|EXB86892.1| hypothetical p735024700ref|XP_009780774.1|3e-91PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana sylv

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051I10+ ATCCAAGGCACTGTAATGTAGCTTGCTCAGATGGGTGGACACTGCAAATAGCG
                      ____________________________________________________________
consensus ATCCAAGGCACTGTAATGTAGCTTGCTCAGATGGGTGGACACTGCAAATAGCG
 
. : . : . : . : . : . :
JMSF051I10+ ACTTTCTTATCACTTTGTATGCGGTACCATTTGTATCTCAAGGTGTGGCCGTCAATAGGC
                      ____________________________________________________________
consensus ACTTTCTTATCACTTTGTATGCGGTACCATTTGTATCTCAAGGTGTGGCCGTCAATAGGC
 
. : . : . : . : . : . :
JMSF051I10+ GCGGAATCTAGAACATCGTCAGTAATAACAGATTTATCTGGGCGGCGCAAGAGAACATAA
JMFF007O20+ GGCGCAAGAGAACATAA
JMFF020H07+ ACAGATTTATCTGGGCGGCGCAAGAGAACATAA
                      ____________________________________________________________
consensus GCGGAATCTAGAACATCGTCAGTAATAACAGATTTATCTGGGCGGCGCAAGAGAACATAA
 
. : . : . : . : . : . :
JMSF051I10+ GGAGTGAGCTCGCAACCTACGATCGGAATGTCTGAAGGGAGGTGCACTCGCAGAACAGTC
JMFF007O20+ GGAGTGAGCTCGCAACCTACGATCGGAATGTCTGAAGGGAGGTGCACTCGCAGAACAGTC
JMFF020H07+ GGAGTGAGCTCGCAACCTACGATCGGAATGTCTGAAGGGAGGTGCACTCGCAGAACAGTC
JMFF022O23+ TGAGCTCGCAACCTACGATCGGAATGTCTGAAGGGAGGTGCACTCGCAGAACAGTC
                      ____________________________________________________________
consensus GGAGTGAGCTCGCAACCTACGATCGGAATGTCTGAAGGGAGGTGCACTCGCAGAACAGTC
 
. : . : . : . : . : . :
JMSF051I10+ AGCATTCTGGGAGATGTGCAACGGCCCACTCTCTTCTCACTACTTCTTCACCTATAGCTA
JMFF007O20+ AGCATTCTGGGAGATGTGCAACGGCCCACTCTCTTCTCACTACTTCTTCACCTATAGCTA
JMFF020H07+ AGCATTCTGGGAGATGTGCAACGGCCCACTCTCTTCTCACTACTTCTTCACCTATAGCTA
JMFF022O23+ AGCATTCTGGGAGATGTGCAACGGCCCACTCTCTTCTCACTACTTCTTCACCTATAGCTA
                      ____________________________________________________________
consensus AGCATTCTGGGAGATGTGCAACGGCCCACTCTCTTCTCACTACTTCTTCACCTATAGCTA
 
. : . : . : . : . : . :
JMSF051I10+ CTACTAGGAAACCACCAGCGTCGAGAAAACTTAATTCTTCAATATCTAAACACGGGATAA
JMFF007O20+ CTACTAGGAAACCACCAGCGTCGAGAAAACTTAATTCTTCAATATCTAAACACGGGATAA
JMFF020H07+ CTACTAGGAAACCACCAGCGTCGAGAAAACTTAATTCTTCAATATCTAAACACGGGATAA
JMFF022O23+ CTACTAGGAAACCACCAGCGTCGAGAAAACTTAATTCTTCAATATCTAAACACGGGATAA
                      ____________________________________________________________
consensus CTACTAGGAAACCACCAGCGTCGAGAAAACTTAATTCTTCAATATCTAAACACGGGATAA
 
. : . : . : . : . : . :
JMSF051I10+ CAATCAATCGGCGGCGGACATGTGGCGGATCCGCCATCACCTGACCTCAGCACCAATCGC
JMFF007O20+ CAATCAATCGGCGGCGGACATGTGGCGGATCCGCCATCACCTGACCTCAGCACCAATCGC
JMFF020H07+ CAATCAATCGGCGGCGGACATGTGGCGGATCCGCCATCACCTGACCTCAGCACCAATCGC
JMFF022O23+ CAATCAATCGGCGGCGGACATGTGGCGGATCCGCCATCACCTGACCTCAGCACCAATCGC
JMSF013P10+ TCAGCACCAATCGC
                      ____________________________________________________________
consensus CAATCAATCGGCGGCGGACATGTGGCGGATCCGCCATCACCTGACCTCAGCACCAATCGC
 
. : . : . : . : . : . :
JMSF051I10+ CAGCCTGACCTCCGGTTTAGCCCCTCTCTCTATTGCAGACCAAAACCCTAAATTTCTAAC
JMFF007O20+ CAGCCTGACCTCCGGTTTAGCCCCTCTCTCTATTGCAGACCAAAACCCTAAATTTCTAAC
JMFF020H07+ CAGCCTGACCTCCGGTTTAGCCCCTCTCTCTATTGCAGACCAAAACCCTAAATTTCTAAC
JMFF022O23+ CAGCCTGACCTCCGGTTTAGCCCCTCTCTCTATTGCAGACCAAAACCCTAAATTTCTAAC
JMSF013P10+ CAGCCTGACCTCCGGTTTAGCCCCTCTCTCTATTGCAGACCAAAACCCTAAATTTCTAAC
                      ____________________________________________________________
consensus CAGCCTGACCTCCGGTTTAGCCCCTCTCTCTATTGCAGACCAAAACCCTAAATTTCTAAC
 
. : . : . : . : . : . :
JMSF051I10+ AGCAAAATCAAATTGTTTTTGAAAAAACCCCCCACAAAAGTAAATAAAAATGAAAACTTT
JMFF007O20+ AGCAAAATCAAATTGTTTTTGAAAAAACCCCCCACAAAAGTAAATAAAAATGAAAACTTT
JMFF020H07+ AGCAAAATCAAATTGTTTTTGAAAAAACCCCCCACAAAAGTAAATAAAAATGAAAACTTT
JMFF022O23+ AGCAAAATCAAATTGTTTTTGAAAAAACCCCCCACAAAAGTAAATAAAAATGAAAACTTT
JMSF013P10+ AGCAAAATCAAATTGTTTTTGAAAAAACCCCCCACAAAAGTAAATAAAAATGAAAACTTT
                      ____________________________________________________________
consensus AGCAAAATCAAATTGTTTTTGAAAAAACCCCCCACAAAAGTAAATAAAAATGAAAACTTT
 
. : . : . : . : . : . :
JMSF051I10+ GGAGAAAAGATTCGAAGATGGGAAGAAATGAAGCAGGTGCGGAGAGCTGAAAGAAAAAAC
JMFF007O20+ GGAGAAAAGATTCGAAGATGGGAAGAAATGAAGCAGGTGCGGAGAGCTGAAAGAAAAAAC
JMFF020H07+ GGAGAAAAGATTCGAAGATGGGAAGAAATGAAGCAGGTGCGGAGAGCTGAAAGAAAAAAC
JMFF022O23+ GGAGAAAAGATTCGAAGATGGGAAGAAATGAAGCAGGTGCGGAGAGCTGAAAGAAAAAAC
JMSF013P10+ GGAGAAAAGATTCGAAGATGGGAAGAAATGAAGCAGGTGCGGAGAGCTGAAAGAAAAAAC
                      ____________________________________________________________
consensus GGAGAAAAGATTCGAAGATGGGAAGAAATGAAGCAGGTGCGGAGAGCTGAAAGAAAAAAC
 
. : . : . : . : . : . :
JMSF051I10+ GATCGAGCTTAGAGATTAGAGAGTGAAATGGAGTTTTAGAGAGATGGCATG
JMFF007O20+ GATCGAGCTTAGAGATTAGAGAGTGAAATGGAGTTTTAGAGAGATGGCATGGGATTTCAT
JMFF020H07+ GATCGAGCTTAGAGATTAGAGAGTGAAATGGAGTTTTAGAGAGATGGCATGGGATTTCAT
JMFF022O23+ GATCGAGCTTAGAGATTAGAGAGTGAAATGGAGTTTTAGAGAGATGGCATGGGATTTCAT
JMSF013P10+ GATCGAGCTTAGAGATTAGAGAGTGAAATGGAGTTTTAGAGAGATGGCATGGGATTTCAT
                      ____________________________________________________________
consensus GATCGAGCTTAGAGATTAGAGAGTGAAATGGAGTTTTAGAGAGATGGCATGGGATTTCAT
 
. : . : . : . : . : . :
JMFF007O20+ TGATTGGTGATTTAGGGTTTTAC
JMFF020H07+ TGATTGGTGATTTAGGGTTTTAC
JMFF022O23+ TGATTGGTGATTTAGGGTTTTAC
JMSF013P10+ TGATTGGTGATTTAGGGTTTTACACAGAAGAGGAGAGGGGGAAAAAAGAGAAGAAAGTTC
                      ____________________________________________________________
consensus TGATTGGTGATTTAGGGTTTTACACAGAAGAGGAGAGGGGGAAAAAAGAGAAGAAAGTTC