| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007P04 | Sequence | 282 | 009257 (3) | ref|XP_009589968.1| | 1e-13 | PREDICTED: auxin response factor 3 [Nicotiana tomentosiformis] | 758 | 008441 (3) | ref|XP_009589968.1| | 2e-15 | PREDICTED: auxin response factor 3 [Nicotiana tomentosiformis] |
| JMSF009D21 | Sequence | 355 | 009257 (3) | ref|XP_009589968.1| | 1e-27 | PREDICTED: auxin response factor 3 [Nicotiana tomentosiformis] | 733 | 008441 (3) | ref|XP_009589968.1| | 4e-13 | PREDICTED: auxin response factor 3 [Nicotiana tomentosiformis] |
| JMSF013L07 | Sequence | 495 | 009257 (3) | ref|XP_009589968.1| | 1e-08 | PREDICTED: auxin response factor 3 [Nicotiana tomentosiformis] | 731 | 008441 (3) | ref|XP_009589968.1| | 8e-17 | PREDICTED: auxin response factor 3 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF009D21+ TACGCGACGGCAGGGTAGTCGGAGAGGTGCTCCAGGTGGCCCTGCGC
____________________________________________________________
consensus TACGCGACGGCAGGGTAGTCGGAGAGGTGCTCCAGGTGGCCCTGCGC
. : . : . : . : . : . :
JMSF007P04+ TCGGCAACGAAATCAACGGCCCCGCACAGGCGTG
JMSF009D21+ CAGATACACGACGGCGCTTCCTTTCTTCGGCAACGAAATCAACGGCCCCGCACAGGCGTG
JMSF013L07+ CCCCGCACAGGCGTG
____________________________________________________________
consensus CAGATACACGACGGCGCTTCCTTTCTTCGGCAACGAAATCAACGGCCCCGCACAGGCGTG
. : . : . : . : . : . :
JMSF007P04+ CCAGAGCTCCATACACAACAACCCCGCCGCCGGCGGGGGAGAAGACTCCGTCAAATCCGA
JMSF009D21+ CCAGAGCTCCATACACAACAACCCCGCCGCCGGCGGGGGAGAAGACTCCGTCAAATCCGA
JMSF013L07+ CCAGAGCTCCATACACAACAACCCCGCCGCCGGCGGGGGAGAAGACTCCGTCAAATCCGA
____________________________________________________________
consensus CCAGAGCTCCATACACAACAACCCCGCCGCCGGCGGGGGAGAAGACTCCGTCAAATCCGA
. : . : . : . : . : . :
JMSF007P04+ ATTATCCGGCGACGTCGCCGCCGCCGTTTCTTCCCCGTCGACGTCGCCATTGTTCACGGT
JMSF009D21+ ATTATCCGGCGACGTCGCCGCCGCCGTTTCTTCCCCGTCGACGTCGCCATTGTTCACGGT
JMSF013L07+ ATTATCCGGCGACGTCGCCGCCGCCGTTTCTTCCCCGTCGACGTCGCCATTGTTCACGGT
____________________________________________________________
consensus ATTATCCGGCGACGTCGCCGCCGCCGTTTCTTCCCCGTCGACGTCGCCATTGTTCACGGT
. : . : . : . : . : . :
JMSF007P04+ GTTCAGATCGATTAATCCGCTCATCATCATCATCCTCCTCTCTCTAAACCCTA
JMSF009D21+ GTTCAGATCGATTAATCCGCTCATCATCATCATCCTCCTCTCTCTAAACCCTA
JMSF013L07+ GTTCAGATCGATTAATCCGCTCATCATCATCATCCTCCTCTCTCTAAACCCTAAGCTACC
____________________________________________________________
consensus GTTCAGATCGATTAATCCGCTCATCATCATCATCCTCCTCTCTCTAAACCCTAAGCTACC
. : . : . : . : . : . :
JMSF013L07+ GGAGACACCGCAACCGCATTGCGAAAAGGAGAAAAGCGTCTGTTAGTTTTGTTTCTCGCT
____________________________________________________________
consensus GGAGACACCGCAACCGCATTGCGAAAAGGAGAAAAGCGTCTGTTAGTTTTGTTTCTCGCT
. : . : . : . : . : . :
JMSF013L07+ CTACCTCAGGGGAAAGTAAAATGCTTTTCCTTTACAAAATCAAATCACACTTTATACGAG
____________________________________________________________
consensus CTACCTCAGGGGAAAGTAAAATGCTTTTCCTTTACAAAATCAAATCACACTTTATACGAG
. : . : . : . : . : . :
JMSF013L07+ CCTCTATCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTTACAGCTAGAGTAC
____________________________________________________________
consensus CCTCTATCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTTACAGCTAGAGTAC
. : . : . : . : . : . :
JMSF013L07+ GCGATACATACAGAGCAGCGTGTATGTATAGGCGCGGTGGCCCTGCGAAGAGCAGCGGCT
____________________________________________________________
consensus GCGATACATACAGAGCAGCGTGTATGTATAGGCGCGGTGGCCCTGCGAAGAGCAGCGGCT
. : . : . : . : . : . :
JMSF013L07+ GCAGAGAGCAGCGCTGCAACTGCTGGGTGAAGCGAAAGAGAGAATCAGAAAGAGATATCG
____________________________________________________________
consensus GCAGAGAGCAGCGCTGCAACTGCTGGGTGAAGCGAAAGAGAGAATCAGAAAGAGATATCG