Contig 009254:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017F09Sequence627009254 (6)emb|CAD33264.1|9e-108carotenoid cleavage oxygenase [Solanum lycopersicum]760018010gb|AHE41421.1|4e-49carotenoid cleavage dioxygenase 1, partial [Lycium chinense]
JMFF051C09Sequence620009254 (6)ref|NP_001234542.1|3e-105carotenoid cleavage dioxygenase 1-1 [Solanum lycopersicum] gb|AAT68187.1| carote615011223 (4)ref|XP_010695196.1|7e-17PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Beta vulgaris subsp.
JMFN041N02Sequence247009254 (6)emb|CAN79030.1|7e-17hypothetical protein VITISV_032896 [Vitis vinifera]
JMSF013H07Sequence186009254 (6)801011223 (4)gb|AHE41421.1|2e-105carotenoid cleavage dioxygenase 1, partial [Lycium chinense]
JMSF036O09Sequence565009254 (6)emb|CAD33264.1|1e-51carotenoid cleavage oxygenase [Solanum lycopersicum]773011223 (4)ref|XP_009784266.1|9e-110PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like isoform X2 [Nico
JMSF052O22Sequence592009254 (6)emb|CAD33264.1|7e-75carotenoid cleavage oxygenase [Solanum lycopersicum]895011223 (4)ref|XP_009784266.1|4e-136PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like isoform X2 [Nico

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF017F09+ CTCCAAAACTTTAACTACA
JMFF051C09+ ACTTTAACTACA
                      ____________________________________________________________
consensus CTCCAAAACTTTAACTACA
 
. : . : . : . : . : . :
JMFF017F09+ TATGGTTTATCAGCCTCTGAAAGTGCCAAAAGCTTCCCATGGTGATAGATTAAAGCTGTA
JMFF051C09+ TATGGTTTATCAGCCTCTGAAAGTGCCAAAAGCTTCCCATGGTGATAGATTAAAGCTGTA
                      ____________________________________________________________
consensus TATGGTTTATCAGCCTCTGAAAGTGCCAAAAGCTTCCCATGGTGATAGATTAAAGCTGTA
 
. : . : . : . : . : . :
JMFF017F09+ TTGGCAGTGCTTGTTCCATAGGAAATATCTAATACTTTGAGCTTTGTTCTTAATGTTTGA
JMFF051C09+ TTGGCAGTGCTGTTCNCATAGGAAATATCTAATACTTTGAGCTTTGTTCTTAATGTTTGA
JMSF036O09+ TGA
                      ____________________________________________________________
consensus TTGGCAGTGCTTTTTCCATAGGAAATATCTAATACTTTGAGCTTTGTTCTTAATGTTTGA
 
. : . : . : . : . : . :
JMFF017F09+ ATGAAAACCGTAAGCAATCCGAACAACCCTTTAAGATCTCCAATCTTCATAAACTTAGCT
JMFF051C09+ ATGAAAACCGTAAGCAATCCGAACAACCCTTTAAGATCTCCAATCTTCATAAACTTAGCT
JMSF036O09+ ANGAAAACNGTAAGCAATCCGAACAACCCTTTAAGATNTCCAATNTTCATAAANTTAGCT
JMSF052O22+ GAAAACCGTAAGCAATCCGAACAACCCTTTAAGATCTCCAATCTTCATAAACTTAGCT
                      ____________________________________________________________
consensus ATGAAAACCGTAAGCAATCCGAACAACCCTTTAAGATCTCCAATCTTCATAAACTTAGCT
 
. : . : . : . : . : . :
JMFF017F09+ CCTCCAAAAAACTGTTCTTGCTTAAGACGTGATGTCGTCACAAAACGAGAGACATATGTT
JMFF051C09+ CCTCCAAAAAACTGTTCTTGCTTAAGACGTGATGTCGTCACAAAACGAGAGACATATGTT
JMSF036O09+ CNTCCAAAAAANTGTTCTTGCTTAAGACGTGAGGTCGTCACAAAACGAGAGACATATGTT
JMSF052O22+ CCTCCAAAAAACTGTTCTTGCTTAAGANGTGANGTCGTCACAAAACGAGAGACATATGTT
                      ____________________________________________________________
consensus CCTCCAAAAAACTGTTCTTGCTTAAGACGTGATGTCGTCACAAAACGAGAGACATATGTT
 
. : . : . : . : . : . :
JMFF017F09+ GCTTTTCCATCTTTAATGCGCAAGCCATGAATCATTCCATCTCCATCAAACCAATGATAC
JMFF051C09+ GCTTTTCCATCTTTAATGCGCAAGCCATGAATCATTCCATCTCCATCAAACCAATGATAC
JMSF036O09+ GCTTTTCCATCTNTAATGCGCAAGCCATGAATCATTCCATNTCCATCAAANCAANGATAC
JMSF052O22+ GCTTTTCCATCTTTAATGCGCAAGCCATGAATCATTCCATCTCCATCAAACCAATGATAC
                      ____________________________________________________________
consensus GCTTTTCCATCTTTAATGCGCAAGCCATGAATCATTCCATCTCCATCAAACCAATGATAC
 
. : . : . : . : . : . :
JMFF017F09+ CCGGCCACTGGAGCAAATTTTGGATTCGGACCGACCCTGACAAACTCACCATTTAGGCAT
JMFF051C09+ CCGGCCACTGGAGCAAATTTTGGATTCGGACCGACCCTGACAAACTCACCATTTAGGCAT
JMSF036O09+ CCGGCCACTGGAGCAAATNTTGGATTCGGACCGACCCTGACAAACTCACCANTTAGGCAN
JMSF052O22+ CCGGCCACTGGAGCAAATTTTGGATTCGGACCGACCCTGACAAACTCACCATTTAGGCAT
                      ____________________________________________________________
consensus CCGGCCACTGGAGCAAATTTTGGATTCGGACCGACCCTGACAAACTCACCATTTAGGCAT
 
. : . : . : . : . : . :
JMFF017F09+ TCAGGGAGGTGGCCAGAGACAGGAAGATCCTTGCAAGGAGGGGTTTCTTCAGGAGCTGGA
JMFF051C09+ TCAGGGAGGTGGCCAGAGACAGGAAGATCCTTGCAAGGAGGGGTTTCTTCAGGAGCTGGA
JMSF036O09+ TCAGGGAGGNGGCCAGAGACAGGAAGATCCTTGCAAGGAGGGGTTTNTTCAGGAGCNGGA
JMFN041N02- TCCTTGCAAGGAGGGGTTTCTTCAGGAGCTGGA
JMSF052O22+ TCAGGGAGGTGGCCAGAGACAGGAAGATCCTTGCAAGGAGGGGTTTCTTCAGGAGCNGGA
                      ____________________________________________________________
consensus TCAGGGAGGTGGCCAGAGACAGGAAGATCCTTGCAAGGAGGGGTTTCTTCAGGAGCTGGA
 
. : . : . : . : . : . :
JMFF017F09+ GCGAAATTACCAGAAAGATAGTGAAGCGGTTTGGAAGAATCATGCATCATCTTCACGATC
JMFF051C09+ GCGAAATTACCAGAAAGATAGTGAAGCGGTTTGGAAGAATCATGCATCACCTTCACGATC
JMSF036O09+ GNGAAATTACCAGAAAGATAGNGAAGCGGTTTGGAAGAATCATGCATCACNTTCACGATC
JMFN041N02- GCGAAATTACCAGAAAGATAGTGAAGCGGTTTGGAAGAATCATGCATCACCTTCACGATC
JMSF052O22+ GCGAAATTACCAGAAAGATAGTGAAGCGGTTTGGAAGAATCATGCATCACCTTCACGATC
                      ____________________________________________________________
consensus GCGAAATTACCAGAAAGATAGTGAAGCGGTTTGGAAGAATCATGCATCACCTTCACGATC
 
. : . : . : . : . : . :
JMFF017F09+ GCCCACTCCAACCAATCTATGGCCTTGGCGGCGATACCACTCTGCGGCGTTGGCTTCACC
JMFF051C09+ GCCCACTCCAACCAATCTATGGCCTTGGCGGCGATACCACTCTGCGGCGTTGGCTTCACC
JMSF036O09+ GCCCACTCCAANCAATNTATGGCCTTGGCGGNGATACCACTCTGCGGNGTNGGGTTCACC
JMFN041N02- GCCCACTCCAACCAATCTATGGCCTTGGCGGCGATACCACTCTGCGGCGTTGGCTTCACC
JMSF052O22+ GCCCACTCCAACCAATCTATGGCCTTGGCGGNGATACCACTCTGNGGCGTNGGCTTCACC
JMSF013H07+ TTCACC
                      ____________________________________________________________
consensus GCCCACTCCAACCAATCTATGGCCTTGGCGGCGATACCACTCTGCGGCGTTGGCTTCACC
 
. : . : . : . : . : . :
JMFF017F09+ ACCACCACACCACCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
JMFF051C09+ ACCACCACACCTCCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
JMSF036O09+ ACCACCACACCTCCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
JMFN041N02- ACCACCACACCTCCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
JMSF052O22+ ACCACCACACCTCCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
JMSF013H07+ ACCACCACACCTCCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
                      ____________________________________________________________
consensus ACCACCACACCTCCCTTCACTCTCTCCACTCCATTCTCTTCGTTCCTCCCCATCTCTCTC
 
. : . : . : . : . : . :
JMFF017F09+ TCTCTCTC
JMFF051C09+ TCTCTCTC
JMSF036O09+ TCTCTCTCTCTCTCTCTCTCTGCACAGTGAAGGTAGTGAGTAGTGAGTGAGTAACGACTC
JMFN041N02- TCTCTCTCTCTCTCTCTCTCTGCACAGTGA
JMSF052O22+ TCTCTCTCTCTCTCTCTCTCTGCACAGTGAAGGTAGTGAGTAGTGAGTGAGTAACGACTC
JMSF013H07+ TCTCTCTCTCTCTCTCTCTCTGCACAGTGAAGGTAGTGAGTAGTGAGTGAGTAACGACTC
                      ____________________________________________________________
consensus TCTCTCTCTCTCTCTCTCTCTGCACAGTGAAGGTAGTGAGTAGTGAGTGAGTAACGACTC
 
. : . : . : . : . : . :
JMSF036O09+ GTGTCT
JMSF052O22+ GTGTCTGGTGAAGGAGAGGACAGCGTTTCCTTTGTGGATATCGGTTGTCGC
JMSF013H07+ GTGTCTGGTGAAGGAGAGGACAGCGTTTCCTTTGTGGATATCGGTTGTCGCACTTCCGCC
                      ____________________________________________________________
consensus GTGTCTGGTGAAGGAGAGGACAGCGTTTCCTTTGTGGATATCGGTTGTCGCACTTCCGCC