clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF006F14 | Sequence | 415 | 009246 (7) | ref|XP_009785601.1| | 3e-10 | PREDICTED: K(+) efflux antiporter 6-like isoform X1 [Nicotiana sylvestris] | |||||
JMSF012H19 | Sequence | 287 | 009246 (7) | 758 | 009246 (7) | ref|XP_009785605.1| | 1e-119 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | |||
JMSF019D14 | Sequence | 380 | 009246 (7) | 735 | 004251 (4) | ref|XP_011097171.1| | 1e-23 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] | |||
JMSF036O08 | Sequence | 656 | 009246 (7) | ref|XP_009785605.1| | 2e-52 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | 673 | 004251 (4) | ref|XP_011097171.1| | 3e-24 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] |
JMSF041A13 | Sequence | 693 | 009246 (7) | ref|XP_009785605.1| | 2e-61 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | 558 | 004251 (4) | ref|XP_011097171.1| | 8e-19 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] |
JMSF050J10 | Sequence | 641 | 009246 (7) | ref|XP_009785605.1| | 3e-47 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | 727 | 004251 (4) | ref|XP_011097171.1| | 2e-25 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF012H19- TTATAATATGGAAATACATAAAAATTCCC
____________________________________________________________
consensus TTATAATATGGAAATACATAAAAATTCCC
. : . : . : . : . : . :
rJMSF012H19- ATATTAGAGAAAGTCCTGAGAAAGGGTGTATTCTTAAAAAATGATGAGCCAACAAATTTT
____________________________________________________________
consensus ATATTAGAGAAAGTCCTGAGAAAGGGTGTATTCTTAAAAAATGATGAGCCAACAAATTTT
. : . : . : . : . : . :
rJMSF012H19- TAAGAAAAAAATTACACAAGGGAAAAGAGTTTAAGATCTACCGAAGCTGTAATTCCAGAA
____________________________________________________________
consensus TAAGAAAAAAATTACACAAGGGAAAAGAGTTTAAGATCTACCGAAGCTGTAATTCCAGAA
. : . : . : . : . : . :
rJMSF012H19- AGACACATAAACAGGAGAATCTGAATCAGGCCTCCAAGAACAGCTACTGCTCGAACAACT
____________________________________________________________
consensus AGACACATAAACAGGAGAATCTGAATCAGGCCTCCAAGAACAGCTACTGCTCGAACAACT
. : . : . : . : . : . :
rJMSF012H19- CGGAGCTTTGTTGTGGAAAACTCCAGCCCCAAAGCAAAAAGAAGAAAAATCACACCAAAC
____________________________________________________________
consensus CGGAGCTTTGTTGTGGAAAACTCCAGCCCCAAAGCAAAAAGAAGAAAAATCACACCAAAC
. : . : . : . : . : . :
rJMSF012H19- TGAGCAACAGTCTCTACTTGCACAATTTCACTAACAACATTAAACCCTCCAGGTCCAACA
____________________________________________________________
consensus TGAGCAACAGTCTCTACTTGCACAATTTCACTAACAACATTAAACCCTCCAGGTCCAACA
. : . : . : . : . : . :
rJMSF012H19- ATGGATCCTGCTAGTAAGTATCCAGTTATAACTGGCTGTCCAGCACAAGCAAAAGCAATT
____________________________________________________________
consensus ATGGATCCTGCTAGTAAGTATCCAGTTATAACTGGCTGTCCAGCACAAGCAAAAGCAATT
. : . : . : . : . : . :
rJMSF012H19- CCACCACAAGTTGCAGCAACAATGACAACTACCAGATCTGATATCAACCTCAAGTCCAAT
JMSF041A13+ AAGTTGCAGCAACAATGACAACTACCAGATCTGATATCAACCTCAAGTCCAAT
JMSF036O08+ CAAGTCCAAT
____________________________________________________________
consensus CCACCACAAGTTGCAGCAACAATGACAACTACCAGATCTGATATCAACCTCAAGTCCAAT
. : . : . : . : . : . :
rJMSF012H19- TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
JMSF041A13+ TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
JMSF036O08+ TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
JMSF050J10+ GGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
____________________________________________________________
consensus TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
. : . : . : . : . : . :
rJMSF012H19- ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
JMSF041A13+ ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
JMSF036O08+ ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
JMSF050J10+ ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
____________________________________________________________
consensus ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
. : . : . : . : . : . :
rJMSF012H19- TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
JMSF041A13+ TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
JMSF036O08+ TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
JMSF050J10+ TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
____________________________________________________________
consensus TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
. : . : . : . : . : . :
rJMSF012H19- TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
JMSF041A13+ TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
JMSF006F14+ CTGCATCATTAGCTTCG
JMSF036O08+ TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
JMSF050J10+ TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
____________________________________________________________
consensus TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
. : . : . : . : . : . :
rJMSF012H19- TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAANGCTA
JMSF041A13+ TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF006F14+ TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF036O08+ TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF050J10+ TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF019D14+ CTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
____________________________________________________________
consensus TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
. : . : . : . : . : . :
rJMSF012H19- TCCTCCTTG
JMSF041A13+ TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF006F14+ TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF036O08+ TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF050J10+ TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF019D14+ TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
____________________________________________________________
consensus TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
. : . : . : . : . : . :
JMSF041A13+ GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF006F14+ GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF036O08+ GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF050J10+ GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF019D14+ GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
____________________________________________________________
consensus GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
. : . : . : . : . : . :
JMSF041A13+ GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF006F14+ GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF036O08+ GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF050J10+ GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF019D14+ GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF012H19+ TAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
____________________________________________________________
consensus GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
. : . : . : . : . : . :
JMSF041A13+ GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF006F14+ GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF036O08+ GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF050J10+ GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF019D14+ GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF012H19+ GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
____________________________________________________________
consensus GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
. : . : . : . : . : . :
JMSF041A13+ CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF006F14+ CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF036O08+ CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF050J10+ CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF019D14+ CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF012H19+ CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
____________________________________________________________
consensus CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
. : . : . : . : . : . :
JMSF041A13+ CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTAC
JMSF006F14+ CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGC
JMSF036O08+ CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGCACAG
JMSF050J10+ CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAG
JMSF019D14+ CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAGTAAC
JMSF012H19+ CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAGTAACACTCACTGCCGTTTA
____________________________________________________________
consensus CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAGTAACACTCACTGCCGTTTA
. : . : . : . : . : . :
JMSF012H19+ AGCGTCTAATTATTATTATACGAACATACCCGGAGAAAGCTAGACTCTACTCTCTAGCCA
____________________________________________________________
consensus AGCGTCTAATTATTATTATACGAACATACCCGGAGAAAGCTAGACTCTACTCTCTAGCCA