Contig 009236:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+                            CACAAGATACCTAAGTATGTGATTGAGATTCATCTAGAATCTC
                      ____________________________________________________________
consensus                              CACAAGATACCTAAGTATGTGATTGAGATTCATCTAGAATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           CCTTGGATTTTAAGTTCATGCATAAATACACCTCAGTTGACTTACATTCATTCTCCCCAT
                      ____________________________________________________________
consensus             CCTTGGATTTTAAGTTCATGCATAAATACACCTCAGTTGACTTACATTCATTCTCCCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           CTTCCCAAATATAATTGTCTTCCTTTCTTACTCTGTGCTTCATATCGGCCAGTCCACCTG
                      ____________________________________________________________
consensus             CTTCCCAAATATAATTGTCTTCCTTTCTTACTCTGTGCTTCATATCGGCCAGTCCACCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           TGCTTGAAACCGGCCGGCCGTCAAAACATTACAACAATAAAAATGTGTGAGGAGGAGGAA
                      ____________________________________________________________
consensus             TGCTTGAAACCGGCCGGCCGTCAAAACATTACAACAATAAAAATGTGTGAGGAGGAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           GAATAAAAAAATAAAAATAAATAAAAAATAAAAAATAGGGAGCTTACGAGATCTAAACGA
                      ____________________________________________________________
consensus             GAATAAAAAAATAAAAATAAATAAAAAATAAAAAATAGGGAGCTTACGAGATCTAAACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           TGGCGGACAGATCTAAAGAACGTCTCCCCGAGAGAGTCTCCGTAGACAATAACCGGCAAG
                      ____________________________________________________________
consensus             TGGCGGACAGATCTAAAGAACGTCTCCCCGAGAGAGTCTCCGTAGACAATAACCGGCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           ACGGGCCACCGAGTAGGTCGGCGCCGGAAATCGCCGAAGGCGATAAACAAGAACGAGAGA
                      ____________________________________________________________
consensus             ACGGGCCACCGAGTAGGTCGGCGCCGGAAATCGCCGAAGGCGATAAACAAGAACGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           GTGTCTGCATCTGAGCGTAGATCTGATGAAAAGATATAATGTATTGGATTTACAGTAAGT
                      ____________________________________________________________
consensus             GTGTCTGCATCTGAGCGTAGATCTGATGAAAAGATATAATGTATTGGATTTACAGTAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           TAATAAACCCAATATTATACCTCTCTTCCATCTGAGCGTAGATCTGATGGCCGGATCTTA
JMSF011D22+                               CTCTCTTCCATCTGAGCGTAGATCTGATGGCCGGATCTTA
                      ____________________________________________________________
consensus             TAATAAACCCAATATTATACCTCTCTTCCATCTGAGCGTAGATCTGATGGCCGGATCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           CAGAAGCAAATAAACCAGCGGTGAAGTGAGGAGAGGACGGCGATGGCATCACGTCCGGCT
JMSF011D22+           CAGAAGCAAATAAACCAGCGGTGAAGTGAGGAGAGGACGGCGATGGCATCACGTCCGGCT
                      ____________________________________________________________
consensus             CAGAAGCAAATAAACCAGCGGTGAAGTGAGGAGAGGACGGCGATGGCATCACGTCCGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           GAGATCTCTGATTCACGAGGAGGAAAGGAAGAGAGGAGAGGAGAGAAGATATGGAATGAG
JMSF011D22+           GAGATCTCTGATTCACGAGGAGGAAAGGAAGAGAGGAGAGGAGAGAAGATATGGAATGAG
                      ____________________________________________________________
consensus             GAGATCTCTGATTCACGAGGAGGAAAGGAAGAGAGGAGAGGAGAGAAGATATGGAATGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029O16+           ACTGAGATCTTTGCGATCT                                         
JMSF011D22+           ACTGAGATCTTTGCGATCTGATTTTTAAAAATTTTATTGTTACTTTACGCGACACGCCCC
                      ____________________________________________________________
consensus             ACTGAGATCTTTGCGATCTGATTTTTAAAAATTTTATTGTTACTTTACGCGACACGCCCC