Contig 009209:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008G15Sequence390009209 (2)ref|XP_009628168.1|4e-53PREDICTED: uncharacterized protein LOC104118591 isoform X2 [Nicotiana tomentosi715009209 (2)ref|XP_006359019.1|1e-59PREDICTED: uncharacterized protein LOC102605236 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF008G15-                                        CTATGTGGTACAATCAAAACAAGGATAATA
                      ____________________________________________________________
consensus                                           CTATGTGGTACAATCAAAACAAGGATAATA
 
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rJMSF008G15-          TTTTTTGAACGAGAGTAAATAATACTCCGTATTATACTATTTTCATCATTTTGAATAAAA
                      ____________________________________________________________
consensus             TTTTTTGAACGAGAGTAAATAATACTCCGTATTATACTATTTTCATCATTTTGAATAAAA
 
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rJMSF008G15-          GAAAAAAAAAAACATTTTANGAATTTTACATTTCTAGACAAAGATANGTTNGGGTTTGCT
                      ____________________________________________________________
consensus             GAAAAAAAAAAACATTTTANGAATTTTACATTTCTAGACAAAGATANGTTNGGGTTTGCT
 
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rJMSF008G15-          GAACNGTAGNCTAATTACAAATTTTTAACGGTAACATTTTCTAAAAACAAATCAGNCCAA
                      ____________________________________________________________
consensus             GAACNGTAGNCTAATTACAAATTTTTAACGGTAACATTTTCTAAAAACAAATCAGNCCAA
 
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rJMSF008G15-          AACCAAAAGCTTTTCTTTAGCAANCATAAACGNGGNCTTCTTGNAGGGTTCCTTCATACC
                      ____________________________________________________________
consensus             AACCAAAAGCTTTTCTTTAGCAANCATAAACGNGGNCTTCTTGNAGGGTTCCTTCATACC
 
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rJMSF008G15-          CTTCTTCTGCCCNGTTGNGAGNGTTGAANAGGATATAATAGGCTGGATCTTGAGGAGAGA
                      ____________________________________________________________
consensus             CTTCTTCTGCCCNGTTGNGAGNGTTGAANAGGATATAATAGGCTGGATCTTGAGGAGAGA
 
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rJMSF008G15-          GTTGAAATAGCTGTAGGACGATGTAGGCNCNCGNGCTAACGCTGCCCAAACATATTAGTA
                      ____________________________________________________________
consensus             GTTGAAATAGCTGTAGGACGATGTAGGCNCNCGNGCTAACGCTGCCCAAACATATTAGTA
 
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rJMSF008G15-          AAAGTATCCAACAAGAAGCCCTTATCCAACNGGNCNCTTTGTATGCAACCCAGACCGAGA
                      ____________________________________________________________
consensus             AAAGTATCCAACAAGAAGCCCTTATCCAACNGGNCNCTTTGTATGCAACCCAGACCGAGA
 
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rJMSF008G15-          GAGCGACAACATTGATGTANAAATCAATTAANGTTGCTGACAGCCNCGGGGTATATAATT
                      ____________________________________________________________
consensus             GAGCGACAACATTGATGTANAAATCAATTAANGTTGCTGACAGCCNCGGGGTATATAATT
 
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rJMSF008G15-          CTTTGCGAAANGGGGACCCATCTGNGACAATTGNGTAAATCAGTGTTCCCAGCATTAGAC
                      ____________________________________________________________
consensus             CTTTGCGAAANGGGGACCCATCTGNGACAATTGNGTAAATCAGTGTTCCCAGCATTAGAC
 
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rJMSF008G15-          AGCCCAAAGCAATGAACACAACTTTTGCAACTGCAACACACAACTTTATCTGTCTTTCNG
JMSF008G15+                                         CTGCAACACACAACTTTATCTGTCTTTCTG
                      ____________________________________________________________
consensus             AGCCCAAAGCAATGAACACAACTTTTGCAACTGCAACACACAACTTTATCTGTCTTTCTG
 
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rJMSF008G15-          GTTTATTCATTTTCCCTTGACGTAACAAAACATAGAAAACTGGATCCTGCATAGATTCTT
JMSF008G15+           GTTTATTCATTTTCCCTTGACGTAACAAAACATAGAAAACTGGATCCTGCATAGATTCTT
                      ____________________________________________________________
consensus             GTTTATTCATTTTCCCTTGACGTAACAAAACATAGAAAACTGGATCCTGCATAGATTCTT
 
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rJMSF008G15-          TAGATGAGAGTTTAAAGAACTGCAA                                   
JMSF008G15+           TAGATGAGAGTTTAAAGAACTGCAAGACAATATAGCCGCATGTGGTAATGCTTCCCAAGC
                      ____________________________________________________________
consensus             TAGATGAGAGTTTAAAGAACTGCAAGACAATATAGCCGCATGTGGTAATGCTTCCCAAGC
 
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JMSF008G15+           ATATTAGCAAAACTACCCAAAGAACAGCACTAATCCAGTTTGATTCCTTGTAGATAACCC
                      ____________________________________________________________
consensus             ATATTAGCAAAACTACCCAAAGAACAGCACTAATCCAGTTTGATTCCTTGTAGATAACCC
 
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JMSF008G15+           AAGCCCCAATGGCAAAGATATTGATATAAAAATCAATCAACGTGGCAGCCATCCACGGAG
                      ____________________________________________________________
consensus             AAGCCCCAATGGCAAAGATATTGATATAAAAATCAATCAACGTGGCAGCCATCCACGGAG
 
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JMSF008G15+           TGAGGAGTTGGATGCGGAAAGGAAGGCCATCGGTGATGATGGTGTAGATTACAGTAGCTG
                      ____________________________________________________________
consensus             TGAGGAGTTGGATGCGGAAAGGAAGGCCATCGGTGATGATGGTGTAGATTACAGTAGCTG
 
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JMSF008G15+           TGATTACGCATCCCAATACACTAAACAAACTCTTCAAGCCCAAGGCGATAGCCATTCCCC
                      ____________________________________________________________
consensus             TGATTACGCATCCCAATACACTAAACAAACTCTTCAAGCCCAAGGCGATAGCCATTCCCC