| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS169G08 | Sequence | 587 | 009206 (5) | gb|KHG07788.1| | 2e-130 | Proteasome subunit alpha type-3 -like protein [Gossypium arboreum] | |||||
| JMSF008C16 | Sequence | 253 | 009206 (5) | ref|XP_007202361.1| | 1e-12 | hypothetical protein PRUPE_ppa009201mg [Prunus persica] gb|EMJ03560.1| hypotheti | 760 | 009206 (5) | ref|XP_004249097.1| | 1e-119 | PREDICTED: proteasome subunit alpha type-3 [Solanum lycopersicum] |
| JMSF037J08 | Sequence | 673 | 009206 (5) | ref|XP_006430440.1| | 2e-144 | hypothetical protein CICLE_v10012559mg [Citrus clementina] ref|XP_006481984.1| P | 602 | 009206 (5) | ref|XP_009786461.1| | 232 | PREDICTED: proteasome subunit alpha type-3-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF037J08- AGGTTTGTTAACATAAAACAAT
____________________________________________________________
consensus AGGTTTGTTAACATAAAACAAT
. : . : . : . : . : . :
rJMSF037J08- AAACCATAAAGCAACNGAGGTATACAGTTTAATGAAACACCAGAATAGAACGCATAAAGG
rJMSF008C16- TTTAATGAAACACCAGAATAGAACGCATAAAGG
____________________________________________________________
consensus AAACCATAAAGCAACNGAGGTATACAGTTTAATGAAACACCAGAATAGAACGCATAAAGG
. : . : . : . : . : . :
rJMSF037J08- TTCCAAATCCACTAACACTTANATAAGAAACACCTTAGCTAAAGTACATTGAAAATTGAA
rJMSF008C16- TTCCAAATCCACTAACACTTAAATAAGAAACACCTTAGCTAAAGTACATTGAAAATTGAA
____________________________________________________________
consensus TTCCAAATCCACTAACACTTAAATAAGAAACACCTTAGCTAAAGTACATTGAAAATTGAA
. : . : . : . : . : . :
rJMSF037J08- AAATCTGCTTCAATAAAGCAACAGTACAATAACAATTTATCATGTTATAGCAACTAATCT
rJMSF008C16- AAATCTGCTTCAATAAAGCAACAGTACAATAACAATTTATCATGTTATAGCAACTAATCT
____________________________________________________________
consensus AAATCTGCTTCAATAAAGCAACAGTACAATAACAATTTATCATGTTATAGCAACTAATCT
. : . : . : . : . : . :
rJMSF037J08- GCATCCATTTCTTCAAGTGCAGCTTTGGCGGCTGCCTTGGCTTCCTCTAACAGATCTTCC
rJMSF008C16- GCATCCATTTCTTCAAGTGCAGCTTTGGCGGCTGCCTTGGCTTCCTCTAACAGATCTTCC
____________________________________________________________
consensus GCATCCATTTCTTCAAGTGCAGCTTTGGCGGCTGCCTTGGCTTCCTCTAACAGATCTTCC
. : . : . : . : . : . :
rJMSF037J08- GGAACCTTCTGGTGTTGGCGGTTAGACTCGTCACATACCCAACTCATTTCCAATTCAAAA
rJMSF008C16- GGAACCTTCTGGTGTTGGCGGTTAGACTCGTCACATACCCAACTCATTTCCAATTCAAAA
JMSF037J08+ CAAAA
____________________________________________________________
consensus GGAACCTTCTGGTGTTGGCGGTTAGACTCGTCACATACCCAACTCATTTCCAATTCAAAA
. : . : . : . : . : . :
rJMSF037J08- GCCTTGTCCTTGGCCTCATCATGTACACCATAAATAATTTTGGCTACTTCAATAACTCCT
rJMSF008C16- GCCTTGTCCTTGGCCTCATCATGTACACCATAAATAATTTTGGCTACTTCAATAACTCCT
JMSF037J08+ GCCTTGTCCTTGGCCTCATCATGTACACCATAAATAATTTNGGCTACTTCAATAACTCCT
____________________________________________________________
consensus GCCTTGTCCTTGGCCTCATCATGTACACCATAAATAATTTTGGCTACTTCAATAACTCCT
. : . : . : . : . : . :
rJMSF037J08- TGCCGACATGTCATTTCAGAGAGCTTCAATTTCTCAATTTCAGTTTTAGCAGCTTGCCTG
rJMSF008C16- TGCCGACATGTCATTTCAGAGAGCTTCAATTTCTCAATTTCAGTTTTAGCAGCTTGCCTG
JMFS169G08+ CCGACATGTCATTTCAGAGAGCTTCAATTTCTCAATTTCAGTTTTAGCAGCTTGCCTG
JMSF037J08+ TGCCGACATGTCATTTCAGAGAGCTTCAATTTCTCAATTTCAGTTTTAGCAGCTTGCCTG
____________________________________________________________
consensus TGCCGACATGTCATTTCAGAGAGCTTCAATTTCTCAATTTCAGTTTTAGCAGCTTGCCTG
. : . : . : . : . : . :
rJMSF037J08- CCCTTTCCAATGGCAGCACCAAAGTACCTATAAGAGACACCAGAAGGTTCAACCATGTAC
rJMSF008C16- CCCTTTCCAATGGCAGCACCAAAGTACCTATAAGAGACACCAGAAGGTTCAACCATGTAC
JMFS169G08+ CCCTTTCCAATGGCAGCACCAAAGTACCTATAAGAGACACCAGAAGGTTCAACCATGTAC
JMSF037J08+ CCCTTTCCAATGGCAGCACCAAAGTACCTATAAGAGACACCAGAAGGTTCAACCATGTAC
____________________________________________________________
consensus CCCTTTCCAATGGCAGCACCAAAGTACCTATAAGAGACACCAGAAGGTTCAACCATGTAC
. : . : . : . : . : . :
rJMSF037J08- NACTGTGGTCCATCTCTATCATATCCTCCAAGAATCACCCCACAACCAAAAGGCCTGAGC
rJMSF008C16- AACTGTGGTCCATCTCTATCATATCCTCCAAGAATCACCCCACAACCAAAAGGCCTGAGC
JMFS169G08+ AACTGTGGTCCATCTCTATCATATCCTCCAAGAATCACCCCACAACCAAAAGGCCTGAGC
JMSF037J08+ AACTGTGGTCCATCTCTATCATATCCTCCAAGAATCACCCCACAACCAAAAGGCCTGAGC
____________________________________________________________
consensus AACTGTGGTCCATCTCTATCATATCCTCCAAGAATCACCCCACAACCAAAAGGCCTGAGC
. : . : . : . : . : . :
rJMSF037J08- CACCNATAAAGTGTACATAAATGTACNTAACTAGCA
rJMSF008C16- CACCAATAAAGTGTACATAAATGTACATAACTAGCAACCCTTTCAGCAAGTTCTTTCACT
JMFS169G08+ CACCAATAAAGTGTACATAAATGTACATAACTAGCAACCCTTTCAGCAAGTTCTTTCACT
JMSF037J08+ CACCAATAAAGTGTACATAAATGTACATAACTAGCAACCCTTTCAGCAAGTTCTTTCACT
____________________________________________________________
consensus CACCAATAAAGTGTACATAAATGTACATAACTAGCAACCCTTTCAGCAAGTTCTTTCACT
. : . : . : . : . : . :
rJMSF008C16- GGAATAGGTTCACCATAGACATTCGCATAGCTGGTTGCTTCAGATTTAGTTCGTGCAACA
JMFS169G08+ GGAATAGGTTCACCATAGACATTCGCATAGCTGGTTGCTTCAGATTTAGTTCGTGCAACA
JMSF037J08+ GGAATAGGTTCACCATAGACATTCGCATAGCTGGTTGCTTCAGATTTAGTTCGTGCAACA
____________________________________________________________
consensus GGAATAGGTTCACCATAGACATTCGCATAGCTGGTTGCTTCAGATTTAGTTCGTGCAACA
. : . : . : . : . : . :
rJMSF008C16- ATTTGCCTCCCATCAGCAGCTAACCCAGCGACAGCCATGCCGGAATGGCGATGAACGGAG
JMFS169G08+ ATTTGCCTCCCATCAGCAGCTAACCCAGCGACAGCCATGCCGGAATGGCGATGAACGGAG
JMSF037J08+ ATTTGCCTCCCATCAGCAGCTAACCCAGCGACAGCCATGCCGGAATGGCGATGAACGGAG
____________________________________________________________
consensus ATTTGCCTCCCATCAGCAGCTAACCCAGCGACAGCCATGCCGGAATGGCGATGAACGGAG
. : . : . : . : . : . :
rJMSF008C16- TGAATTCGCCGATTAGATCCTGGCAACATCATCTTCAA
JMFS169G08+ TGAATTCGCCGATTAGATCCTGGCAACATCATCTTCAAAGCAATCAGCTTCTCCACACCC
JMSF037J08+ TGAATTCGCCGATTAGATCCTGGCAACATCATCTTCAAAGCAATCAGCTTCTCCACACCC
____________________________________________________________
consensus TGAATTCGCCGATTAGATCCTGGCAACATCATCTTCAAAGCAATCAGCTTCTCCACACCC
. : . : . : . : . : . :
JMFS169G08+ ATGACGATTCCATCCTTGCATTTGATGCCGATTACAGTGCCGCTGTTGTCAACGGCCTTG
JMSF037J08+ ATGACGATTCCATCCTTGCATTTGATGCCGATTACAGTGCCGCTGTTGTCAACGGCCTTG
JMSF008C16+ GTCAACGGCCTNG
____________________________________________________________
consensus ATGACGATTCCATCCTTGCATTTGATGCCGATTACAGTGCCGCTGTTGTCAACGGCCTTG
. : . : . : . : . : . :
JMFS169G08+ GCGGCGTACTCGATCTGGAAAACTCTGCCGTCCGGAGAGAAGGTTGTCACCGAGAGATCG
JMSF037J08+ GCGGCGTACTCGATCTGGAAAACTCTGCCGTCCGGAGAGAAGGTTGTCACCGAGAGATCG
JMSF008C16+ GCGGCGTACTCGATCTGGAAAACTCTGCCGTCCGGAGAGAAGGTTGTCACCGAGAGATCG
____________________________________________________________
consensus GCGGCGTACTCGATCTGGAAAACTCTGCCGTCCGGAGAGAAGGTTGTCACCGAGAGATCG
. : . : . : . : . : . :
JMFS169G08+ TAGCCAGTGCCTATGCTGCTCATCTTTTCTCTTCCGTTTCT
JMSF037J08+ TAGCCAGTGCCTATGCTGCTCATCTTTTCTCTTCCGTTTCTTCTGCTAGAGGTATTCCCC
JMSF008C16+ TAGCCAGTGCCTATGCTGCTCATCTTTTCTCTTCCGTTTCTTCTGCTAGAGGTATTCCCC
____________________________________________________________
consensus TAGCCAGTGCCTATGCTGCTCATCTTTTCTCTTCCGTTTCTTCTGCTAGAGGTATTCCCC
. : . : . : . : . : . :
JMSF037J08+ TTGATTC
JMSF008C16+ TTGATTCGAGTGTGCTCCGAGCTCTGAACAAGCAAATATAGTGCAGACGAAGGCGAAGAG
____________________________________________________________
consensus TTGATTCGAGTGTGCTCCGAGCTCTGAACAAGCAAATATAGTGCAGACGAAGGCGAAGAG
. : . : . : . : . : . :
JMSF008C16+ AGTTTTCTTTGAGCTCAAGACAACAGGCCAGTGCAACTGTTGGGGAAAAAAATCAAACCC
____________________________________________________________
consensus AGTTTTCTTTGAGCTCAAGACAACAGGCCAGTGCAACTGTTGGGGAAAAAAATCAAACCC