Contig 009202:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045E13+                                                         TCCATCACGTCAAT
                      ____________________________________________________________
consensus                                                           TCCATCACGTCAAT
 
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JMSF045E13+           CACTGATTTCCTCATTCGTATATCTAGAGAGGAGGAGGGAGACTTACGAGAGAGGAGTGT
                      ____________________________________________________________
consensus             CACTGATTTCCTCATTCGTATATCTAGAGAGGAGGAGGGAGACTTACGAGAGAGGAGTGT
 
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JMSF045E13+           ACGTTTGCCAACGTTGGGAGCTCCGACGATGAGCACTCCAGGCCGTTTCTCCAGCGATTC
                      ____________________________________________________________
consensus             ACGTTTGCCAACGTTGGGAGCTCCGACGATGAGCACTCCAGGCCGTTTCTCCAGCGATTC
 
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JMSF045E13+           ATTATCCGCCGGCATCGCTGCTGCTTGCTGATCCATTTCTTCTATCACTGAAAAAGTGAA
                      ____________________________________________________________
consensus             ATTATCCGCCGGCATCGCTGCTGCTTGCTGATCCATTTCTTCTATCACTGAAAAAGTGAA
 
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JMSF045E13+           AATCAACTCACTGAGGGCCGGTGCTATCGTTTTATAGGCCGTGGATCGGTGGACTCGTGG
                      ____________________________________________________________
consensus             AATCAACTCACTGAGGGCCGGTGCTATCGTTTTATAGGCCGTGGATCGGTGGACTCGTGG
 
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JMSF045E13+           AGGCAGTGGAGCTGACAGCTACTGCCTTCTATGTTGTTCTTCTTGCGATTTGCGAGTGTC
                      ____________________________________________________________
consensus             AGGCAGTGGAGCTGACAGCTACTGCCTTCTATGTTGTTCTTCTTGCGATTTGCGAGTGTC
 
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JMSF045E13+           GAGTGCCGGTGGGACTGTCAAGTGGAGCTGATGGAGACTATACCGGGGTGCCGAGCTGCT
                      ____________________________________________________________
consensus             GAGTGCCGGTGGGACTGTCAAGTGGAGCTGATGGAGACTATACCGGGGTGCCGAGCTGCT
 
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JMSF045E13+           GCCTGCTACCGTGGACTCTTGGGGGCTTGGGGGCGGTGGCGACTTGCAATTTGCTACTGG
                      ____________________________________________________________
consensus             GCCTGCTACCGTGGACTCTTGGGGGCTTGGGGGCGGTGGCGACTTGCAATTTGCTACTGG
 
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JMSF045E13+           TTTAGGACTCTTCTAATTGAAGACAGTAAAAGCAACCCCCAATGCAAGAAAGTCAGCACC
                      ____________________________________________________________
consensus             TTTAGGACTCTTCTAATTGAAGACAGTAAAAGCAACCCCCAATGCAAGAAAGTCAGCACC
 
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JMSF045E13+           CTTGTGAGCTGAGAAATTGCAGAGAGAATGAAATTCTGCCACTCAACAACTCCATCCACC
                      ____________________________________________________________
consensus             CTTGTGAGCTGAGAAATTGCAGAGAGAATGAAATTCTGCCACTCAACAACTCCATCCACC
 
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JMSF045E13+           ACCCCGACGGTCAGTTCCCGGTCGCCAACAAATTCGACAATATAACTATACAAGCATTGA
                      ____________________________________________________________
consensus             ACCCCGACGGTCAGTTCCCGGTCGCCAACAAATTCGACAATATAACTATACAAGCATTGA
 
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JMSF045E13+           AAAAACTCAATTTTTAGCCGTTGAGGACCAATGTGCAGCGCAAACGGCTACTCTTGAGAA
JMSF017D23+              AACTCAATTNTTAGCCGTTGAGGACCAATGTGCAGCGCAAACGGCTACTCTTGAGAA
                      ____________________________________________________________
consensus             AAAAACTCAATTTTTAGCCGTTGAGGACCAATGTGCAGCGCAAACGGCTACTCTTGAGAA
 
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JMSF045E13+           TCCAAACCTACTCTTGAGAATCCAAACCTTCGCTATGGCTGGGCGGTGTGGGCGAGACAG
JMSF019G20+                               TCCAAACCTTCGCTATGGCTGGGCGGTGTGGGCGAGACAG
JMSF017D23+           TCCAAACCTACTCTTGAGAATCCAAACCTTCGCTATGGCTGGGCGGTGTGGGCGAGACAG
JMSF007D07+                               TCCAAACCTTCGCTATGGCTGGGCGGTGTGGGCGAGACAG
                      ____________________________________________________________
consensus             TCCAAACCTACTCTTGAGAATCCAAACCTTCGCTATGGCTGGGCGGTGTGGGCGAGACAG
 
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JMSF045E13+           TCAGGAAGCTGCGTCGTTGAGTTAGCACTTCCGGGCTCCGGCTACGACTTTGAAGAACC 
JMSF019G20+           TCAGGAAGCTGCGTCGTTGAGTTAGCACTTCCGGGCTCCGGCTACGACTTTGAAGAACC 
JMSF017D23+           TCAGGAAGCTGCGTCGTTGAGTTAGCACTTCCGGGCTCCGGCTACGACTTTGAAGAACC 
JMSF007D07+           TCAGGAAGCTGCGTCGTTGAGTTAGCACTTCCGGGCTCCGGCTACGACTTTGAAGAACCC
                      ____________________________________________________________
consensus             TCAGGAAGCTGCGTCGTTGAGTTAGCACTTCCGGGCTCCGGCTACGACTTTGAAGAACCC