Contig 009199:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS122F04Sequence571009199 (3)ref|XP_009600216.1|9e-84PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMSF006J08Sequence292009199 (3)ref|XP_009600216.1|6e-24PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 310008546 (2)ref|XP_010113026.1|8e-09putative leucine-rich repeat receptor-like protein kinase [Morus notabilis] gb|
JMSF026J04Sequence640009199 (3)ref|XP_009600216.1|1e-97PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 760008546 (2)ref|XP_010113026.1|1e-87putative leucine-rich repeat receptor-like protein kinase [Morus notabilis] gb|

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026J04+ CTGTTGAAACGGGGAGAGATCCTGTCAACTGATTATCTGCCAGGTC
                      ____________________________________________________________
consensus CTGTTGAAACGGGGAGAGATCCTGTCAACTGATTATCTGCCAGGTC
 
. : . : . : . : . : . :
JMFS122F04+ TTGGAGAGATTACCCAGAGTTGCTGGAATTTCACCCGTGAAGTTATT
JMSF026J04+ AAGCCAGTAGAGTTTGGAGAGATTACCCAGAGTTGCTGGAATTTCACCCGTGAAGTTATT
                      ____________________________________________________________
consensus AAGCCAGTAGAGTTTGGAGAGATTACCCAGAGTTGCTGGAATTTCACCCGTGAAGTTATT
 
. : . : . : . : . : . :
JMFS122F04+ TGAGTTGAGTGCTAAGAAGGATAATTCTGAAAGTTTCCCCAGTTCAGCAGGTACACTGCC
JMSF026J04+ TGAGTTGAGTGCTAAGAAGGATAATTCTGAAAGTTTCCCCAGTTCAGCAGGTACACTGCC
                      ____________________________________________________________
consensus TGAGTTGAGTGCTAAGAAGGATAATTCTGAAAGTTTCCCCAGTTCAGCAGGTACACTGCC
 
. : . : . : . : . : . :
JMFS122F04+ ACTAAAGCTACACCCAGCAAGAATTAGTATGCTTAGTTTCTGCAGATCTCCAATCCTTGG
JMSF026J04+ ACTAAAGCTACACCCAGCAAGAATTAGTATGCTTAGTTTCTGCAGATCTCCAATCCTTGG
                      ____________________________________________________________
consensus ACTAAAGCTACACCCAGCAAGAATTAGTATGCTTAGTTTCTGCAGATCTCCAATCCTTGG
 
. : . : . : . : . : . :
JMFS122F04+ AGAAATGGAGCCTGTGAGGCCTCGGTTAAATGACAGGTCTAAGGATATTAATTCAGTAAG
JMSF026J04+ AGAAATGGAGCCTGTGAGGCCTCGGTTAAATGACAGGTCTAAGGATATTAATTCAGTAAG
                      ____________________________________________________________
consensus AGAAATGGAGCCTGTGAGGCCTCGGTTAAATGACAGGTCTAAGGATATTAATTCAGTAAG
 
. : . : . : . : . : . :
JMFS122F04+ ACCCCCAATATCACCATTTAGTTTTCCTTTCAAGCCCATAGTTGACAGTCCCAGTGCAGT
JMSF026J04+ ACCCCCAATATCACCATTTAGTTTTCCTTTCAAGCCCATAGTTGACAGTCCCAGTGCAGT
                      ____________________________________________________________
consensus ACCCCCAATATCACCATTTAGTTTTCCTTTCAAGCCCATAGTTGACAGTCCCAGTGCAGT
 
. : . : . : . : . : . :
JMFS122F04+ GACCCTGGAGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
JMSF026J04+ GACCCTGGAGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
JMSF006J08+ AGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
                      ____________________________________________________________
consensus GACCCTGGAGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
 
. : . : . : . : . : . :
JMFS122F04+ GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
JMSF026J04+ GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
JMSF006J08+ GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
                      ____________________________________________________________
consensus GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
 
. : . : . : . : . : . :
JMFS122F04+ CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
JMSF026J04+ CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
JMSF006J08+ CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
                      ____________________________________________________________
consensus CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
 
. : . : . : . : . : . :
JMFS122F04+ CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
JMSF026J04+ CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
JMSF006J08+ CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
                      ____________________________________________________________
consensus CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
 
. : . : . : . : . : . :
JMFS122F04+ CTCACTTTGGTGCAGATGAGAAGAGGA
JMSF026J04+ CTCACTTTGGTGCAGATGAGAAGAGGAGAGATTGTAAGAGTTTGTGTTGTGTT
JMSF006J08+ CTCACTTTGGTGCAGATGAGAAGAGGAGAGATTGTAAGAGTTTGTGTTGTGTTGTTTTTC
                      ____________________________________________________________
consensus CTCACTTTGGTGCAGATGAGAAGAGGAGAGATTGTAAGAGTTTGTGTTGTGTTGTTTTTC