| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006G07 | Sequence | 491 | 009191 (9) | emb|CBI33905.3| | 7e-87 | unnamed protein product [Vitis vinifera] | 576 | 009191 (9) | ref|XP_011094477.1| | 327 | PREDICTED: uncharacterized protein LOC105174167 [Sesamum indicum] |
| JMFN028M10 | Sequence | 639 | 009191 (9) | ref|XP_009612312.1| | 352 | PREDICTED: uncharacterized protein LOC104105658 [Nicotiana tomentosiformis] | |||||
| JMSF005J05 | Sequence | 339 | 009191 (9) | emb|CDP12994.1| | 5e-36 | unnamed protein product [Coffea canephora] | |||||
| JMSF022P06 | Sequence | 613 | 009191 (9) | emb|CBI33905.3| | 2e-106 | unnamed protein product [Vitis vinifera] | 703 | 009191 (9) | ref|XP_009612312.1| | 364 | PREDICTED: uncharacterized protein LOC104105658 [Nicotiana tomentosiformis] |
| JMSF024N20 | Sequence | 648 | 009191 (9) | emb|CBI33905.3| | 1e-116 | unnamed protein product [Vitis vinifera] | 768 | 009191 (9) | ref|XP_009612312.1| | 374 | PREDICTED: uncharacterized protein LOC104105658 [Nicotiana tomentosiformis] |
| JMSF035G12 | Sequence | 621 | 009191 (9) | emb|CBI33905.3| | 2e-107 | unnamed protein product [Vitis vinifera] | |||||
This contig is upended
. : . : . : . : . : . :
rJMSF024N20- AATTGATAGACTTATAAGCAAAGTAT
____________________________________________________________
consensus AATTGATAGACTTATAAGCAAAGTAT
. : . : . : . : . : . :
JMFN028M10+ TTGAGGACTA
rJMFF006G07- TTATATATATGCATGAATCAATACAGGCTTGCAATTTGAGGACTA
rJMSF024N20- TGGAATCTCATTTCATTATATATATGCATGAATCAATACAGGCTTGCAATTTGAGGACTA
rJMSF022P06- TTGAGGACTA
____________________________________________________________
consensus TGGAATCTCATTTCATTATATATATGCATGAATCAATACAGGCTTGCAATTTGAGGACTA
. : . : . : . : . : . :
JMFN028M10+ CAAAACACCAATACTTCATCAAGACTGGCCTTAGACTCATCCCCAAACAATGACTCCTTC
rJMFF006G07- CAAAACACCAATACTTCATCAAGACTGGCCTTAGACTCATCCCCAAACAATGACTCCTTC
rJMSF024N20- CAAAACACCAATACTTCATCAAGACTGGCCTTAGACTCATCCCCAAACAATGACTCCTTC
JMSF024N20+ CTCATCCCCAAACAATGACTCCTTC
rJMSF022P06- CAAAACACCAATACTTCATCAAGACTGGCCTTAGACTCATCCCCAAACAATGACTCCTTC
____________________________________________________________
consensus CAAAACACCAATACTTCATCAAGACTGGCCTTAGACTCATCCCCAAACAATGACTCCTTC
. : . : . : . : . : . :
JMFN028M10+ CCATCTGCCCTCTTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
rJMFF006G07- CCATCTGCCCTCTTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
rJMSF024N20- CCATCTGCCCTCTTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
JMSF024N20+ CCATCTGCCCTCTTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
rJMSF022P06- CCATCTGCCCTCTTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
JMSF022P06+ TAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
JMSF035G12+ TTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
____________________________________________________________
consensus CCATCTGCCCTCTTCTTATAAGACAGCCCCAATCTTGACTTAGCTTGCCTCAAGTCCCCA
. : . : . : . : . : . :
JMFN028M10+ ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
rJMFF006G07- ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
rJMSF024N20- ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
JMSF024N20+ ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
rJMSF022P06- ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
JMSF022P06+ ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
JMFF006G07+ CACCGGAGCCAATGGCGGTCCG
JMSF035G12+ ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
____________________________________________________________
consensus ATCCCTGAATTTGTGTCCGGCCCTGCAAACCCTCCCATCACCGGAGCCAATGGCGGTCCG
. : . : . : . : . : . :
JMFN028M10+ ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
rJMFF006G07- ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTANTCGAAGAGGGCGGCG
rJMSF024N20- ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
JMSF024N20+ ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
rJMSF022P06- ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
JMSF022P06+ ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
JMFF006G07+ ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
JMSF035G12+ ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
____________________________________________________________
consensus ATGAGCAGCCCGTCGGCACCGAACTGCGGGCCGCCACGCGCGTAGTCGAAGAGGGCGGCG
. : . : . : . : . : . :
JMFN028M10+ CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
rJMFF006G07- CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
rJMSF024N20- CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
JMSF024N20+ CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
rJMSF022P06- CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
JMSF022P06+ CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
JMFF006G07+ CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
JMSF035G12+ CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
____________________________________________________________
consensus CCACTGCCCCCAACCTTGGGTAAGACTATGGGGTCATCATCATGGGTGTCATTTTGTGGC
. : . : . : . : . : . :
JMFN028M10+ CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
rJMFF006G07- CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
rJMSF024N20- CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
JMSF024N20+ CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
rJMSF022P06- CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
JMSF022P06+ CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
JMFF006G07+ CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
JMSF035G12+ CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
____________________________________________________________
consensus CAGTAGAAGAGAAAAGCATAAAAAGTATCATAGTAATCATCTGTGCTTCTGTAGCCCTCA
. : . : . : . : . : . :
JMFN028M10+ GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
rJMFF006G07- GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
rJMSF024N20- GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
JMSF024N20+ GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
rJMSF022P06- GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
JMSF022P06+ GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
JMFF006G07+ GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
JMSF035G12+ GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
JMSF005J05+ AAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
____________________________________________________________
consensus GGGTTGAATGCCCCAAACTTGAAGGAGTTGTTTGTGTAGCCAATGATGACACATGGCCCC
. : . : . : . : . : . :
JMFN028M10+ TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
rJMFF006G07- TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
rJMSF024N20- TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
JMSF024N20+ TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
rJMSF022P06- TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
JMSF022P06+ TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
JMFF006G07+ TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
JMSF035G12+ TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
JMSF005J05+ TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
____________________________________________________________
consensus TTGAAGTCACAGTTTTGGTGGAAATCAGTGGCACTAAATCCATCGGTTGATGCCTGATAG
. : . : . : . : . : . :
JMFN028M10+ CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
rJMFF006G07- CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGA
rJMSF024N20- CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
JMSF024N20+ CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
rJMSF022P06- CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
JMSF022P06+ CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
JMFF006G07+ CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
JMSF035G12+ CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
JMSF005J05+ CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
____________________________________________________________
consensus CAGCATTTCAACTCCCTCCCTTTCAAGAAAGTTTTGGTGAGAAGAGAAGGTGGGAAGGGG
. : . : . : . : . : . :
JMFN028M10+ AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
rJMSF024N20- AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
JMSF024N20+ AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
rJMSF022P06- AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
JMSF022P06+ AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
JMFF006G07+ AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
JMSF035G12+ AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
JMSF005J05+ AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
____________________________________________________________
consensus AGGTCAATGTTATGGTACTTAGGAGGCTGTGGCTTGTCTTCAGTTTTGCGTCTTCCAAAA
. : . : . : . : . : . :
JMFN028M10+ TCCCAA
rJMSF024N20- TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
JMSF024N20+ TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
rJMSF022P06- TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
JMSF022P06+ TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
JMFF006G07+ TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCT
JMSF035G12+ TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
JMSF005J05+ TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
____________________________________________________________
consensus TCCCAATTGAACAAACTGTGTGGAGAGTTGAGTAATCGAGTAGCCATCTGCACATGGAAC
. : . : . : . : . : . :
rJMSF024N20- TATGCTTCATTGCTGGCCACTC
JMSF024N20+ TATGCTTCATTGCTTGCCACTC
rJMSF022P06- TATGCTTCATTGCTTGCCACTCACTTTCAT
JMSF022P06+ TATGCTTCATTGCTTGCCACTCACTTTCAT
JMSF035G12+ TATGCTTCATTGCTTGCCACTCACTTTCAT
JMSF005J05+ TATGCTTCATTGCTTGCCACTCACTTTCATGTATTAACAACCTCACATACATGTATCTCC
____________________________________________________________
consensus TATGCTTCATTGCTTGCCACTCACTTTCATGTATTAACAACCTCACATACATGTATCTCC