Contig 009186:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037I15+                                                 CTGAGTTTCGATTCCAAAGACG
                      ____________________________________________________________
consensus                                                   CTGAGTTTCGATTCCAAAGACG
 
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JMSF037I15+           AAGCAGAGGGTGTGCTTTTGTCCTCCAAATCAAGCAGAGCTTTGCTGTTAGACTTCATTT
                      ____________________________________________________________
consensus             AAGCAGAGGGTGTGCTTTTGTCCTCCAAATCAAGCAGAGCTTTGCTGTTAGACTTCATTT
 
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JMSF037I15+           ACTGGTGTATTAAGAAATTAATATAAACAAAAGTATGGGAAGCTATTCTGGCTCTCAATC
                      ____________________________________________________________
consensus             ACTGGTGTATTAAGAAATTAATATAAACAAAAGTATGGGAAGCTATTCTGGCTCTCAATC
 
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JMSF037I15+           AGAATTGGCAAAAATGTATGTCCTCCTGGGAACAAATGTTGATATCACCTGGTGAGAAAA
                      ____________________________________________________________
consensus             AGAATTGGCAAAAATGTATGTCCTCCTGGGAACAAATGTTGATATCACCTGGTGAGAAAA
 
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JMSF037I15+           AGGAATGTTTGCTCGCAGTCCTTTGAAAACGAGAAGAGGCCAGAATCCGGAGGCGGAGAA
                      ____________________________________________________________
consensus             AGGAATGTTTGCTCGCAGTCCTTTGAAAACGAGAAGAGGCCAGAATCCGGAGGCGGAGAA
 
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JMSF001E11+                                     GGTTGAGAAGCGGACNCCGACACAGAGAGANTGA
JMSF037I15+           TTTGAGCCGGAAAGATACAGTGAGATGGTTGAGAAGCGGACACGGACACAGAGAGAGTGA
                      ____________________________________________________________
consensus             TTTGAGCCGGAAAGATACAGTGAGATGGTTGAGAAGCGGACACGGACACAGAGAGAGTGA
 
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JMSF001E11+           GAGGTGCGAGAGCGCCAAAGAGGATAGGNTTAGGGTTGAGAAGCGGACACTGGACACAGA
JMSF037I15+           GAGGTGCGAGAGCGGCAAAGAGGATAGGGTTAGGGTTGAGAAGCGGACACTGGACACAGA
                      ____________________________________________________________
consensus             GAGGTGCGAGAGCGGCAAAGAGGATAGGGTTAGGGTTGAGAAGCGGACACTGGACACAGA
 
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JMSF001E11+           GAGAGTGAGAGGTGCCGTCGGAAAGAAAATAGATGGAAGAAGCACCGTCCTCTGCAGCCG
JMSF037I15+           GAGAGTGAGAGGTGCCGTCGGAAAGAAAATAGATGGAAGAAGCACCGTCCTCTGCAGCCG
JMSF005B16+                                                      ACCGTCNTCTGCAGCCG
                      ____________________________________________________________
consensus             GAGAGTGAGAGGTGCCGTCGGAAAGAAAATAGATGGAAGAAGCACCGTCCTCTGCAGCCG
 
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JMSF001E11+           GAAGTTGCCGCGCCGCTGCTGACGTGGTCGCAGATCTGGAGTATAGTGGCAACTCGGCAA
JMSF037I15+           GAAGTTGCCGCGCCGCTGCTGACGTGGTCGCAGATCTGGAGTATAGTGGCAACTCGGCAA
JMSF005B16+           GAAGTTGCCGCGCCGCTGCTGACGTGGTCGCAGATCTGGAGTATAGTGGCAACTCGGCAA
                      ____________________________________________________________
consensus             GAAGTTGCCGCGCCGCTGCTGACGTGGTCGCAGATCTGGAGTATAGTGGCAACTCGGCAA
 
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JMSF001E11+           GAAGAAGCTTCTAAGTTGGTGTGACCATTGTCGCCGGAGTCGTTCAGGTGCTAAGCTACA
JMSF037I15+           GAAGAAGCTTCTAAGTTGGTGTGACCATTGTCGCCGGAGTCGTTCAGGTGCTAAGCTACA
JMSF005B16+           GAAGAAGCTTCTAAGTTGGTGTGACCATTGTCGCCGGAGTCGTTCAGGTGCTAAGCTACA
                      ____________________________________________________________
consensus             GAAGAAGCTTCTAAGTTGGTGTGACCATTGTCGCCGGAGTCGTTCAGGTGCTAAGCTACA
 
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JMSF001E11+           ACGAAGAAGAAGAAGAAAAGGTAGGTATGAAGATTGATGGAAGGAGGCGGAGGTCGTCAC
JMSF037I15+           ACGAAGAAGAAGAAGAAAAGGTAGGTATGAAGATTGATGGAAGGAGGCGGAGGTCGTCAC
JMSF005B16+           ACGAAGAAGAAGAAGAAAAGGTAGGTATGAAGATTGATGGAAGGAGGCGGAGGTCGTCAC
                      ____________________________________________________________
consensus             ACGAAGAAGAAGAAGAAAAGGTAGGTATGAAGATTGATGGAAGGAGGCGGAGGTCGTCAC
 
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JMSF001E11+           TCTTCAAATTAGCGAACTTGTCACTTGAGAGAAGAGGCGAAGGTCTCAACTCT       
JMSF037I15+           TCTTCAAATTAGCGAACTTGTCACTTGAGAGAAGAGGCGAAGGTCTCAACTCT       
JMSF005B16+           TCTTCAAATTAGCGAACTTGTCACTTGAGAGAAGAGGCGAAGGTCTCAACTCTAAAGATC
                      ____________________________________________________________
consensus             TCTTCAAATTAGCGAACTTGTCACTTGAGAGAAGAGGCGAAGGTCTCAACTCTAAAGATC