Contig 009166:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002K01Sequence442009166 (2)ref|XP_009794004.1|2e-27PREDICTED: protease Do-like 7 [Nicotiana sylvestris]394012768 (2)
JMSF048O02Sequence651009166 (2)emb|CAN65467.1|9e-81hypothetical protein VITISV_040526 [Vitis vinifera]764012768 (2)ref|XP_010062238.1|2e-19PREDICTED: protease Do-like 7 isoform X3 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048O02+ TCCAACAACCCTGATTTCCAGTCNTACACAAGCAGNTTCAGGAGCAAGAGG
                      ____________________________________________________________
consensus TCCAACAACCCTGATTTCCAGTCNTACACAAGCAGNTTCAGGAGCAAGAGG
 
. : . : . : . : . : . :
JMSF048O02+ AANTTNTTCATAGCTCAGAAATTTTATTGCANTAGGGTCATAGCGGAAAAACCCAAAATC
                      ____________________________________________________________
consensus AANTTNTTCATAGCTCAGAAATTTTATTGCANTAGGGTCATAGCGGAAAAACCCAAAATC
 
. : . : . : . : . : . :
JMSF048O02+ ATGAACAGGGTCTCTGTATATTGGATAGACAGGGGTTTCTTCACGGTTCACAAACATAGC
                      ____________________________________________________________
consensus ATGAACAGGGTCTCTGTATATTGGATAGACAGGGGTTTCTTCACGGTTCACAAACATAGC
 
. : . : . : . : . : . :
JMSF048O02+ TTCCGCCACCACAGGTCCAGGTTTAACCACGTGGCGGTTTGTGAGTATGATTCCCCGGCA
JMSF002K01+ GAGTATGATTCCCNGGCA
                      ____________________________________________________________
consensus TTCCGCCACCACAGGTCCAGGTTTAACCACGTGGCGGTTTGTGAGTATGATTCCCCGGCA
 
. : . : . : . : . : . :
JMSF048O02+ CTTATCCACAACGAAGCCGGTTGCGTAACTGGAACCGGCAGACTGAGTGTCGAAAGCTCG
JMSF002K01+ NTTATCCACAANGAAGCCGGTTGNGTAACTGGAACCGGCAGANTGAGTGTNGAAAGCTNG
                      ____________________________________________________________
consensus CTTATCCACAACGAAGCCGGTTGCGTAACTGGAACCGGCAGACTGAGTGTCGAAAGCTCG
 
. : . : . : . : . : . :
JMSF048O02+ ACATGTGGTGATCCGGAGAACGACCACCGCGGGAACCACCTTGTTAAGCGCCCCCCGCCA
JMSF002K01+ ACATGTGGTGATCCGGAGAACGACCACCGCGGGAACCACCTTGTTAAGCGCCCCCCGCCA
                      ____________________________________________________________
consensus ACATGTGGTGATCCGGAGAACGACCACCGCGGGAACCACCTTGTTAAGCGCCCCCCGCCA
 
. : . : . : . : . : . :
JMSF048O02+ GTCCTCGGCGTTGACGACGTTCTTGAACGGAGGATCAATCTCCATACATAGTTCCTCCTT
JMSF002K01+ GTCCTCGGCGTTGACGACGTTCTTGAACGGAGGATCAATCTCCATACATAGTTCCTCCTT
                      ____________________________________________________________
consensus GTCCTCGGCGTTGACGACGTTCTTGAACGGAGGATCAATCTCCATACATAGTTCCTCCTT
 
. : . : . : . : . : . :
JMSF048O02+ CGTTATAGGCGATTCCGGTCCCGATGCATCCTCCAAAACCAAATTCTCCAACAAATCCTC
JMSF002K01+ CGTTATAGGCGATTCCGGTCCCGATGCATCCTCCAAAACCAAATTCTCCAACAAATCCTC
                      ____________________________________________________________
consensus CGTTATAGGCGATTCCGGTCCCGATGCATCCTCCAAAACCAAATTCTCCAACAAATCCTC
 
. : . : . : . : . : . :
JMSF048O02+ CATCTTCCTAAAACCCTATCCCCCCTCAACCGAAATTTTGTAACACAATCTAATCAACAA
JMSF002K01+ CATCTTCCTAAAACCCTATCCCCCCTCAACCGAAATTTTGTAACACAATCTAATCAACAA
                      ____________________________________________________________
consensus CATCTTCCTAAAACCCTATCCCCCCTCAACCGAAATTTTGTAACACAATCTAATCAACAA
 
. : . : . : . : . : . :
JMSF048O02+ TTCCTGAGTATATTTTAGAGGTACATAGAATCCAATCCGAACGAAGAGTATACTCCGGCG
JMSF002K01+ TTCCTGAGTATATTTTAGAGGTACATAGAATCCAATCCGAACGAAGAGTATACTCCGGCG
                      ____________________________________________________________
consensus TTCCTGAGTATATTTTAGAGGTACATAGAATCCAATCCGAACGAAGAGTATACTCCGGCG
 
. : . : . : . : . : . :
JMSF048O02+ AGGATTAGATGGCTAAAGATTCACTCTACATGCAGACAGATCGGAATCAAATTTCGCCAC
JMSF002K01+ AGGATTAGATGGCTAAAGATTCACTCTACATGCAGACAGATCGGAATCAAATTTCGCCAC
                      ____________________________________________________________
consensus AGGATTAGATGGCTAAAGATTCACTCTACATGCAGACAGATCGGAATCAAATTTCGCCAC