| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS027F08 | Sequence | 561 | 009137 (7) | ref|XP_006451102.1| | 1e-66 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
| JMFS099G01 | Sequence | 625 | 009137 (7) | ref|XP_006451102.1| | 6e-92 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
| JMFS106D03 | Sequence | 603 | 009137 (7) | ref|XP_006451102.1| | 4e-75 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
| JMFS153C04 | Sequence | 607 | 009137 (7) | ref|XP_006451102.1| | 3e-74 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
| JMFS155E06 | Sequence | 626 | 009137 (7) | ref|XP_006451102.1| | 1e-84 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
| JMFS158G07 | Sequence | 476 | 009137 (7) | ref|XP_006451102.1| | 2e-45 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
| JMFS165D05 | Sequence | 591 | 009137 (7) | ref|XP_006451102.1| | 1e-82 | hypothetical protein CICLE_v100107081mg, partial [Citrus clementina] gb|ESR64342 | |||||
This contig is upended
. : . : . : . : . : . :
JMFS099G01+ AGGGAATTTACCGGCGAACC
____________________________________________________________
consensus AGGGAATTTACCGGCGAACC
. : . : . : . : . : . :
JMFS099G01+ GATTGTTGCTGATGTCAAGCTCGAACAGAATCTTCAAGTTTTTGAACTTCTTCGGGATTG
JMFS165D05+ GATGTCAAGCTCGAACAGAATCTCAAAGTTTTTGAACTTCTTCGGGATTG
JMFS155E06+ GATGTCAAGCTCGAACAGAATCTTCAAGTTTTTGAACTTCTTCGGGATTG
JMFS106D03+ TCGGGATTG
JMFS153C04+ CGGGATTG
____________________________________________________________
consensus GATTGTTGCTGATGTCAAGCTCGAACAGAATCTTCAAGTTTTTGAACTTCTTCGGGATTG
. : . : . : . : . : . :
JMFS099G01+ TGCCGCAGAAGCGGTTGGAATTGATGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
JMFS165D05+ TGCCGCAGAAGCGGTTGGAATTGATGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
JMFS155E06+ TGCCGCAGAAGCGGTTGGAATTGATGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
JMFS027F08+ TGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
JMFS106D03+ TGCCGCAGAAGCGGTTGGAATTGATGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
JMFS153C04+ TGCCGCAGAAGCGGTTGGAATTGATGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
____________________________________________________________
consensus TGCCGCAGAAGCGGTTGGAATTGATGTGGAAAACCCCTAGATCTGCGAGCAGGCCGAGCT
. : . : . : . : . : . :
JMFS099G01+ CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
JMFS165D05+ CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
JMFS155E06+ CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
JMFS027F08+ CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
JMFS106D03+ CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
JMFS153C04+ CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
____________________________________________________________
consensus CCTCCGGGAGGTATCCGGCAATGTCGTCGTGGTTGAGGTCAATGCTGGCGACGGTCCGAA
. : . : . : . : . : . :
JMFS099G01+ TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
JMFS165D05+ TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
JMFS155E06+ TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
JMFS027F08+ TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
JMFS106D03+ TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
JMFS153C04+ TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
JMFS158G07+ AGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
____________________________________________________________
consensus TTTTAGGATTATCCGGCGCCGGCGCGCAGAAGACTCCGGTGTAGTTGCACACGTCTGACC
. : . : . : . : . : . :
JMFS099G01+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
JMFS165D05+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
JMFS155E06+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
JMFS027F08+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
JMFS106D03+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
JMFS153C04+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
JMFS158G07+ CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
____________________________________________________________
consensus CGACCCAATCCGAAGTGGTGTTCCGCGGATCCGAAATGATGGCCTGCTTCCAGGCCTGGA
. : . : . : . : . : . :
JMFS099G01+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
JMFS165D05+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
JMFS155E06+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
JMFS027F08+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
JMFS106D03+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
JMFS153C04+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGGCGGGTCAACCGTGA
JMFS158G07+ GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
____________________________________________________________
consensus GAGCGATGTAAGCATTCCGGATCCTGTCGTTCTCGAACGTCAACGACGGGTCAACCGTGA
. : . : . : . : . : . :
JMFS099G01+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
JMFS165D05+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
JMFS155E06+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
JMFS027F08+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
JMFS106D03+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
JMFS153C04+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
JMFS158G07+ CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
____________________________________________________________
consensus CCCGCTCGCCGCGGTCGCCGAACTCGTCGCGGTAGTACAGCAGCTGGCGGCGCTGGATGT
. : . : . : . : . : . :
JMFS099G01+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
JMFS165D05+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
JMFS155E06+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
JMFS027F08+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
JMFS106D03+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
JMFS153C04+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
JMFS158G07+ AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
____________________________________________________________
consensus AGTGGACCTCGGAGTCCGACAATGGGCCATTATCGGAAACCCTGAAAGCGGCGGCGGAGG
. : . : . : . : . : . :
JMFS099G01+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
JMFS165D05+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
JMFS155E06+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
JMFS027F08+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
JMFS106D03+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGATCCGT
JMFS153C04+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
JMFS158G07+ CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
____________________________________________________________
consensus CAGAAAACGAGAATGCGAGTAAAACAGAAGCTAAAAAAAAGCAGAAAGATGGAGCTCCGT
. : . : . : . : . : . :
JMFS099G01+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
JMFS165D05+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
JMFS155E06+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
JMFS027F08+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
JMFS106D03+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
JMFS153C04+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
JMFS158G07+ TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
____________________________________________________________
consensus TTTGCCTCATGTCAGCGCAGACATCAGTGGAAGCTTCAGGGAGGTTTGTTAATGGAGAAA
. : . : . : . : . : . :
JMFS099G01+ GAGAG
JMFS165D05+ G
JMFS155E06+ GAGAGGAAATGTGGGTGGGAGAGATAGAGAGAG
JMFS027F08+ GAGAGGAAATGTGGGTGGGAGAGATAGAGAGAGAGAGAGAGAGAG
JMFS106D03+ GAGAGGAAATGTGGGTGGGAGAGATAGAGAGAGAGAGAGAGAGAG
JMFS153C04+ GAGAGGAAATGTGGGTGGGAGAGATAGAGAGAGAGAGAGAGAGAG
JMFS158G07+ GAGAGGAAATGTGGGTGGGAGAGATAGAGAGAGAGAGAGAGAGAGGAGAGAGATCTGAAG
____________________________________________________________
consensus GAGAGGAAATGTGGGTGGGAGAGATAGAGAGAGAGAGAGAGAGAGGAGAGAGATCTGAAG