Contig 009135:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029J12Sequence574017367gb|EYU39957.1|2e-118hypothetical protein MIMGU_mgv1a001233mg [Erythranthe guttata]718009135 (4)ref|XP_009765947.1|2e-36PREDICTED: gamma-tubulin complex component 3 [Nicotiana sylvestris]
JMFF033K16Sequence517023739emb|CDP10165.1|1e-86unnamed protein product [Coffea canephora]724009135 (4)ref|XP_009765947.1|2e-37PREDICTED: gamma-tubulin complex component 3 [Nicotiana sylvestris]
JMFS157D04Sequence584009135 (4)
JMSF010M08Sequence247009231 (2)gb|EYU39957.1|9e-07hypothetical protein MIMGU_mgv1a001233mg [Erythranthe guttata]681009135 (4)ref|XP_009765947.1|5e-52PREDICTED: gamma-tubulin complex component 3 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF010M08+                                           GGAGTCACGTTGATAGATTATATGAAG
                      ____________________________________________________________
consensus                                              GGAGTCACGTTGATAGATTATATGAAG
 
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rJMSF010M08+          GCATTAATGAATTGCAATCTAGATCTGCAGAATCATCTCTGACGTCTCAGGACCGAGTCA
rJMFF033K16+                                                                GAGTCA
rJMFF029J12+                                                                GAGTCA
                      ____________________________________________________________
consensus             GCATTAATGAATTGCAATCTAGATCTGCAGAATCATCTCTGACGTCTCAGGACCGAGTCA
 
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rJMSF010M08+          AATCACGAGGAAAGTCAAGTACTAAATCTTCGGAACCAGGTTCATGGCTTGGTGAGGGTA
rJMFF033K16+          AATCACGAGGAAAGTCAAGTACTAAATCTTCGGAACCAGGTTCATGGCTTGGTGAGGGTA
rJMFF029J12+          AATCACGAGGAAAGTCAAGTACTAAATCTTCGGAACCAGGTTCATGGCTTGGTGAGGGTA
                      ____________________________________________________________
consensus             AATCACGAGGAAAGTCAAGTACTAAATCTTCGGAACCAGGTTCATGGCTTGGTGAGGGTA
 
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rJMSF010M08+          GGAAGGCTCTTACTAACCGTGTTGGTGAGTTTCTTCAAAACATAGGACAAGATATTGATG
rJMFF033K16+          GGAAGGCTCTTACTAACCGTGTTGGTGAGTTTCTTCAAAACATAGGACAAGATATTGATG
rJMFF029J12+          GGAAGGCTCTTACTAACCGTGTTGGTGAGTTTCTTCAAAACATAGGACAAGATATTGATG
                      ____________________________________________________________
consensus             GGAAGGCTCTTACTAACCGTGTTGGTGAGTTTCTTCAAAACATAGGACAAGATATTGATG
 
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rJMSF010M08+          CAATTACGAAGGAATATTCATCCCTCTTTGAGGGGTTCATTTCACAATTGCCTGTGCAAC
rJMFF033K16+          CAATTACGAAGGAATATTCATCCCTCTTTGAGGGGTTCATTTCACAATTGCCTGTGCAAC
rJMFF029J12+          CAATTACGAAGGAATATTCATCCCTCTTTGAGGGGTTCATTTCACAATTGCCTGTGCAAC
                      ____________________________________________________________
consensus             CAATTACGAAGGAATATTCATCCCTCTTTGAGGGGTTCATTTCACAATTGCCTGTGCAAC
 
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rJMSF010M08+          AGCACATCGATTTGAAGTTCCTTATGTTCCGACTTGACTTCACTGAATTTTATAGTCATC
rJMFF033K16+          AGCACATCGATTTGAAGTTCCTTATGTTCCGACTTGACTTCACTGAATTTTATAGTCATC
rJMFF029J12+          AGCACATCGATTTGAAGTTCCTTATGTTCCGACTTGACTTCACTGAATTTTATAGTCATC
JMFS157D04+                           GTTCCTTATGTTCCGACTTGACTTCACTGAATTTTATAGTCATC
                      ____________________________________________________________
consensus             AGCACATCGATTTGAAGTTCCTTATGTTCCGACTTGACTTCACTGAATTTTATAGTCATC
 
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rJMSF010M08+          TGCGTGGTAATATAGGAGAGAAGCTTCCATAGTTTCTCATTAAGTACAGAACATGCACTG
rJMFF033K16+          TGCGTGGTAATATAGGAGAGAAGCTTCCATAGTTTCTCATTAAGTACAGAACATGCACTG
rJMFF029J12+          TGCGTGGTAATATAGGAGAGAAGCTTCCATAGTTTCTCATTAAGTACAGAACATGCACTG
JMFS157D04+           TGCGTGGTAATATAGGAGAGAAGCTTCCATAGTTTCTCATTAAGTACAGAACATGCACTG
                      ____________________________________________________________
consensus             TGCGTGGTAATATAGGAGAGAAGCTTCCATAGTTTCTCATTAAGTACAGAACATGCACTG
 
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rJMSF010M08+          ACATTTAACCACTTCAACATCTTCCATTCATCAATTGCTAAGTGACACACGATCCATCTC
rJMFF033K16+          ACATTTAACCACTTCAACATCTTCCATTCATCAATTGCTAAGTGACACACGATCCATCTC
rJMFF029J12+          ACATTTAACCACTTCAACATCTTCCATTCATCAATTGCTAAGTGACACACGATCCATCTC
JMFS157D04+           ACATTTAACCACTTCAACATCTTCCATTCATCAATTGCTAAGTGACACACGATCCATCTC
                      ____________________________________________________________
consensus             ACATTTAACCACTTCAACATCTTCCATTCATCAATTGCTAAGTGACACACGATCCATCTC
 
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rJMSF010M08+          TTTCTCTATGCTACCTTCCTGCTCTACCCCTTTGCCTTTGGGTACTGGGTGCAATGGCTT
rJMFF033K16+          TTTCTCTATGCTACCTTCCTGCTCTACCCCTTTGCCTTTGGGTACTGGGTGCAATGGCTT
rJMFF029J12+          TTTCTCTATGCTACCTTCCTGCTCTACCCCTTTGCCTTTGGGTACTGGGTGCAATGGCTT
JMFS157D04+           TTTCTTTATGCTACCTTCCTGCTCTACCCCTTTGCCTTTGGGTACTGGGTGCAATGGCTT
                      ____________________________________________________________
consensus             TTTCTCTATGCTACCTTCCTGCTCTACCCCTTTGCCTTTGGGTACTGGGTGCAATGGCTT
 
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rJMSF010M08+          ATCTTCATCTGCTGCCTAACAATTGCCGAGTTATCCTTAGCCTTTAGGTACTGTATGCAA
rJMFF033K16+          ATCTTCATCTGCTGCCTAACAATTGCCGAGTTATCCTTAGCCTTTAGGTACTGTATGCAA
rJMFF029J12+          ATCTTCATCTGCTGCCTAACAATTGCCGAGTTATCCTTAGCCTTTAGGTACTGTATGCAA
JMFS157D04+           ATCTTCATCTGCTGCCTAACAATTGCCGAGTTATCCTTAGCCTTTAGGTACTGTATGCAA
                      ____________________________________________________________
consensus             ATCTTCATCTGCTGCCTAACAATTGCCGAGTTATCCTTAGCCTTTAGGTACTGTATGCAA
 
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rJMSF010M08+          TGGCTTCATGTCATTACTCTTGAGGTTTTCAAATTTCTTTTTACTGTTTTACGAGTTCCT
rJMFF033K16+          TGGCTTCATGTCATTACTCTTGAGGTTTTCAAATTTCTTTTTACTGTTTTACGAGTTCCT
rJMFF029J12+          TGGCTTCATGTCATTACTCTTGAGGTTTTCAAATTTCTTTTTACTGTTTTACGAGTTCCT
JMFS157D04+           TGGCTTCATGTCATTACTCTTGAGGTTTTCAAATTTCTTTTTACTGTTTTACGAGTTCCT
                      ____________________________________________________________
consensus             TGGCTTCATGTCATTACTCTTGAGGTTTTCAAATTTCTTTTTACTGTTTTACGAGTTCCT
 
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rJMSF010M08+          AGATAGGCTGGCAGGTTTATGTATGGCTTTTGTTCAATTGGTTTGT              
rJMFF033K16+          AGATAGGCTGGCAGGTTTATGTATGGCTTTTGTTCAATTGGTTTGTTGGATATTTTTGGC
rJMFF029J12+          AGATAGGCTGGCAGGTTTATGTATGGCTTTTGTTCAATTGGTTTGTTGGATATTTTTGGC
JMFS157D04+           AGATAGGCTGGCAGGTTTATGTATGGCTTTTGTTCAATTGGTTTGTTGGATATTTTTGGC
                      ____________________________________________________________
consensus             AGATAGGCTGGCAGGTTTATGTATGGCTTTTGTTCAATTGGTTTGTTGGATATTTTTGGC
 
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rJMFF033K16+          TCTACCAAGATTTAGTATGAGCTTGTTTATCTGTAATATATTTTTGTTTAGCCAGGTGAG
rJMFF029J12+          TCTACCAAGATTTAGTATGAGCTTGTTTATCTGTAATATATTTTTGTTTAGCCAGGTGAG
JMFS157D04+           TCTACCAAGATTTAGTATGAGCTTGTTTATCTGTAATATATTTTTGTTTAGCCAGGTGAG
                      ____________________________________________________________
consensus             TCTACCAAGATTTAGTATGAGCTTGTTTATCTGTAATATATTTTTGTTTAGCCAGGTGAG
 
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rJMFF033K16+          TTAATTGTGTTTGGCTGCCAAATTGGCTTTTGTGGTTTCATGTATTGGC           
rJMFF029J12+          TTAATTGTGCTTGGCTGCCAAATTGGCTTTTGTGGTTTCATGTATTGGC           
JMFS157D04+           TTAATTGTGTTTGGCTGCCAAATTGGCTTTTGTGGTTTCATGTATTGGCCTGAAGATGAG
                      ____________________________________________________________
consensus             TTAATTGTGTTTGGCTGCCAAATTGGCTTTTGTGGTTTCATGTATTGGCCTGAAGATGAG
 
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JMFS157D04+           AAATAAATGGTGTTTTGTTTTCXXXXXXXXXXXXXXXXXXXXXXXXCTCAGACTAGTCTC
                      ____________________________________________________________
consensus             AAATAAATGGTGTTTTGTTTTCNNNNNNNNNNNNNNNNNNNNNNNNCTCAGACTAGTCTC