Contig 009133:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F17Sequence471009133 (3)gb|KDP41450.1|2e-25hypothetical protein JCGZ_15857 [Jatropha curcas]794008294 (5)gb|KDO81095.1|4e-51hypothetical protein CISIN_1g035790mg [Citrus sinensis]
JMFN043O02Sequence627009133 (3)ref|NP_001234722.1|2e-77LeTIR [Solanum lycopersicum] gb|ACY26209.1| LeTIR [Solanum lycopersicum]
JMFS155E11Sequence559009133 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN043O02- CCAAATGAATAG
                      ____________________________________________________________
consensus CCAAATGAATAG
 
. : . : . : . : . : . :
JMFN043O02- ATAAAAAAGAAGGTGTTTTACTGACCTGCACTGACTAGCAACGACGGAGAGTCCACTGGT
                      ____________________________________________________________
consensus ATAAAAAAGAAGGTGTTTTACTGACCTGCACTGACTAGCAACGACGGAGAGTCCACTGGT
 
. : . : . : . : . : . :
JMFN043O02- ACCAAATCCTTCGCAGCAGACGAGAATCAGCTCCTTGAAGTTGGGGAAAGAGCGAGACAG
                      ____________________________________________________________
consensus ACCAAATCCTTCGCAGCAGACGAGAATCAGCTCCTTGAAGTTGGGGAAAGAGCGAGACAG
 
. : . : . : . : . : . :
JMFN043O02- CACGACAAGATCATCGTCCGTAACAAACATGCGTTTAAGGTACACCTTCTCCAGCGCACA
                      ____________________________________________________________
consensus CACGACAAGATCATCGTCCGTAACAAACATGCGTTTAAGGTACACCTTCTCCAGCGCACA
 
. : . : . : . : . : . :
JMFN043O02- ATAAGCCTCGGCCATGGCGGCGACCCAGCGGGAGAAGTAGGCGCCCCAGTCCGGCGGGAG
                      ____________________________________________________________
consensus ATAAGCCTCGGCCATGGCGGCGACCCAGCGGGAGAAGTAGGCGCCCCAGTCCGGCGGGAG
 
. : . : . : . : . : . :
JMFN043O02- CAAGCTGAAATCGGCAAACCGGGGCTTACCCTTTATGCTCACCGATTTCACCCGCCCGAA
                      ____________________________________________________________
consensus CAAGCTGAAATCGGCAAACCGGGGCTTACCCTTTATGCTCACCGATTTCACCCGCCCGAA
 
. : . : . : . : . : . :
JMFN043O02- CCGCCGCGAAACCCGCTGCGGCGACACGGCGTAGCAGTTCCCGATGAACACCTCCGATCT
JMFF008F17+ GGCGACACGGCGTAGCAGTTCCCGATGAACACCTCCGATCT
                      ____________________________________________________________
consensus CCGCCGCGAAACCCGCTGCGGCGACACGGCGTAGCAGTTCCCGATGAACACCTCCGATCT
 
. : . : . : . : . : . :
JMFN043O02- CGTCATCGCCTCCACCCGGTACCACGCCTTGCACACCAGCGCCGCCGCGTTGCGGTCGCG
JMFF008F17+ CGTCATCGCCTCCACCCGGTACCACGCCTTGCACACCAGCGCCGCCGCGTTGCGGTCGCG
                      ____________________________________________________________
consensus CGTCATCGCCTCCACCCGGTACCACGCCTTGCACACCAGCGCCGCCGCGTTGCGGTCGCG
 
. : . : . : . : . : . :
JMFN043O02- CCGGTCGGTGAGAAAGCACAGCACGTTCTCCAGCACATTCTCCAGGACCTGATC
JMFF008F17+ CCGGTCGGTGAGAAAGCACAGCACGTTCTCCAGCACATTCTCCAGGACCTGATCCGGGCA
JMFS155E11+ CCAGGACCTGATCCGGGCA
                      ____________________________________________________________
consensus CCGGTCGGTGAGAAAGCACAGCACGTTCTCCAGCACATTCTCCAGGACCTGATCCGGGCA
 
. : . : . : . : . : . :
JMFF008F17+ CGGCCGCGCGTAGTAGTGGTTTCCGGCGCCGGCGCCGTCGTCCCCGAGATCGGAATCAGA
JMFS155E11+ CGGCCGCGCGTAGTAGTGGTTTCCGGCGCCGGCGCCGTCGTCCCCGAGATCGGAATCAGA
                      ____________________________________________________________
consensus CGGCCGCGCGTAGTAGTGGTTTCCGGCGCCGGCGCCGTCGTCCCCGAGATCGGAATCAGA
 
. : . : . : . : . : . :
JMFF008F17+ AGAAGAAGGTATCGGGATCGGCGCCTTTTCCTCCGGCGACATTTCTGAGCATACATCAGC
JMFS155E11+ AGAAGAAGGTATCGGGATCGGCGCCTTTTCCTCCGGCGACATTTCTGAGCATACATCAGC
                      ____________________________________________________________
consensus AGAAGAAGGTATCGGGATCGGCGCCTTTTCCTCCGGCGACATTTCTGAGCATACATCAGC
 
. : . : . : . : . : . :
JMFF008F17+ ACCCATTCTACCACTAAAATCACTACTTCTCACTCAACAAATCTTCTTCTTCTTCTTCAA
JMFS155E11+ ACCCATTCTACCACTAAAATCACTACTTCTCACTCAACAAATCTTCTTCTTCTTCTTCAA
                      ____________________________________________________________
consensus ACCCATTCTACCACTAAAATCACTACTTCTCACTCAACAAATCTTCTTCTTCTTCTTCAA
 
. : . : . : . : . : . :
JMFF008F17+ TTCCTTCTCCCCAGATTCAATGATTCATCAACAACATTCCCAGAGGGTGCCTGGAAATCT
JMFS155E11+ TTCCTTCTCCCCAGATTCAATGATTCATCAACAACATTCCCAGAGGGTGCCTGGAAATCT
                      ____________________________________________________________
consensus TTCCTTCTCCCCAGATTCAATGATTCATCAACAACATTCCCAGAGGGTGCCTGGAAATCT
 
. : . : . : . : . : . :
JMFF008F17+ ATATAAACAACTAATTAAGTAAATCAAAACCTTCAAATATTCATACCTCTACCTAGAC
JMFS155E11+ ATATAAACAACTAATTAAGTAAATCAAAACCTTCAAATATTCATACCTCTACCCAGACAA
                      ____________________________________________________________
consensus ATATAAACAACTAATTAAGTAAATCAAAACCTTCAAATATTCATACCTCTACCTAGACAA
 
. : . : . : . : . : . :
JMFS155E11+ GAAATGATTTAAAAATCGCATCTTTTTCAGATTATGAGTGGACTGAGACTGAAAGTAAAC
                      ____________________________________________________________
consensus GAAATGATTTAAAAATCGCATCTTTTTCAGATTATGAGTGGACTGAGACTGAAAGTAAAC
 
. : . : . : . : . : . :
JMFS155E11+ AGGTTCAACGCAAGCTGAGCTGTGTGTGATCATGGAGGGGAATTCCATGTTCCTTTACTT
                      ____________________________________________________________
consensus AGGTTCAACGCAAGCTGAGCTGTGTGTGATCATGGAGGGGAATTCCATGTTCCTTTACTT
 
. : . : . : . : . : . :
JMFS155E11+ CTAAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGGCTCACAAGTCAGTATGTCACA
                      ____________________________________________________________
consensus CTAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGGCTCACAAGTCAGTATGTCACA
 
. : . : . : . : . : . :
JMFS155E11+ ACACATCTGCTTCCATTATTTCGTGCACTCAAGCATTTTTTTTTTTTTTACTGAATTTTG
                      ____________________________________________________________
consensus ACACATCTGCTTCCATTATTTCGTGCACTCAAGCATTTTTTTTTTTTTTACTGAATTTTG