clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF045P21 | Sequence | 633 | 009130 (4) | ref|XP_004173110.1| | 2e-117 | PREDICTED: uncharacterized LOC101221472, partial [Cucumis sativus] | 640 | 004129 (2) | ref|XP_006344223.1| | 79.7 | PREDICTED: uncharacterized protein LOC102606280 [Solanum tuberosum] |
JMFS028F10 | Sequence | 662 | 009130 (4) | ref|XP_004173110.1| | 1e-129 | PREDICTED: uncharacterized LOC101221472, partial [Cucumis sativus] | |||||
JMFS153H06 | Sequence | 623 | 009130 (4) | ref|XP_004173110.1| | 7e-86 | PREDICTED: uncharacterized LOC101221472, partial [Cucumis sativus] | |||||
JMSF014J07 | Sequence | 228 | 009130 (4) | ref|XP_002271170.1| | 106 | PREDICTED: uncharacterized protein LOC100242361 [Vitis vinifera] emb|CBI17699.3| | 789 | 004129 (2) | ref|XP_009797525.1| | 5e-28 | PREDICTED: uncharacterized protein LOC104243941 isoform X1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMFS028F10+ TATATATATCACCCGTATAG
____________________________________________________________
consensus TATATATATCACCCGTATAG
. : . : . : . : . : . :
JMFS028F10+ TTGGTGGCCCAGTGAGCTCTATCTTCCCTTACTTCCTCGGTTTTTGAAAGCCACATGGGT
JMFF045P21+ TACTTCCTCGGTTTTTGAAAGCCACATGGGT
____________________________________________________________
consensus TTGGTGGCCCAGTGAGCTCTATCTTCCCTTACTTCCTCGGTTTTTGAAAGCCACATGGGT
. : . : . : . : . : . :
JMFS028F10+ GCCAAAGCACGAAGATCATCTATATGCATCGCCAGAAGCCCCCCAACCTTGTCACAAAGT
JMFF045P21+ GCCAAAGCACGAAGATCATCTATATGCATCGCCAGAAGCCCCCCAACCTTGTCACAAAGT
____________________________________________________________
consensus GCCAAAGCACGAAGATCATCTATATGCATCGCCAGAAGCCCCCCAACCTTGTCACAAAGT
. : . : . : . : . : . :
JMFS028F10+ TCAGGGTGTGTCGTGTGCAGTTTGGCAAGAACATTGTCGCATCCAACCAAGTACCCATAA
JMFF045P21+ TCAGGGTGTGTCGTGTGCAGTTTGGCAAGAACATTGTCGCATCCAACCAAGTACCCATAA
JMFS153H06+ CGCATCCAACCAAGTACCCATAA
____________________________________________________________
consensus TCAGGGTGTGTCGTGTGCAGTTTGGCAAGAACATTGTCGCATCCAACCAAGTACCCATAA
. : . : . : . : . : . :
JMFS028F10+ TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
JMFF045P21+ TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
JMFS153H06+ TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
____________________________________________________________
consensus TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
. : . : . : . : . : . :
JMFS028F10+ ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
JMFF045P21+ ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
JMFS153H06+ ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
____________________________________________________________
consensus ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
. : . : . : . : . : . :
JMFS028F10+ TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
JMFF045P21+ TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
JMFS153H06+ TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
____________________________________________________________
consensus TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
. : . : . : . : . : . :
JMFS028F10+ GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
JMFF045P21+ GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
JMFS153H06+ GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
____________________________________________________________
consensus GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
. : . : . : . : . : . :
JMFS028F10+ TTCTTCTCCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
JMFF045P21+ TTCTTCTTCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
JMSF014J07+ TCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
JMFS153H06+ TTCTTCTCCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
____________________________________________________________
consensus TTCTTCTCCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
. : . : . : . : . : . :
JMFS028F10+ CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
JMFF045P21+ CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
JMSF014J07+ CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATNGAAGTAGTTCTGGCACTCCACCGAG
JMFS153H06+ CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
____________________________________________________________
consensus CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
. : . : . : . : . : . :
JMFS028F10+ AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
JMFF045P21+ AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
JMSF014J07+ AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCANTGATCAGC
JMFS153H06+ AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
____________________________________________________________
consensus AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
. : . : . : . : . : . :
JMFS028F10+ GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATC
JMFF045P21+ GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATC
JMSF014J07+ GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATCAGACC
JMFS153H06+ GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATCAGACCGCCAGAAATGGAA
____________________________________________________________
consensus GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATCAGACCGCCAGAAATGGAA
. : . : . : . : . : . :
JMFS153H06+ ATGGGTATTGCTCAAACGATCTTAATTTCATGGTTTTGGCATTTTGTGCAAAAAAGTCAA
____________________________________________________________
consensus ATGGGTATTGCTCAAACGATCTTAATTTCATGGTTTTGGCATTTTGTGCAAAAAAGTCAA
. : . : . : . : . : . :
JMFS153H06+ TGCCTTTTTTTGGTGTTATTTTTTTTTTCTCAATCAAGTTCTTTTTCCCTGGTAAACTCA
____________________________________________________________
consensus TGCCTTTTTTTGGTGTTATTTTTTTTTTCTCAATCAAGTTCTTTTTCCCTGGTAAACTCA