Contig 009125:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J23Sequence508011877 (5)620009125 (7)ref|XP_009778431.1|8e-65PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]
JMFF033N22Sequence510011877 (5)ref|XP_004233034.1|2e-06PREDICTED: U-box domain-containing protein 17 [Solanum lycopersicum]748009125 (7)ref|XP_009778431.1|3e-91PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]
JMFF039D05Sequence532011877 (5)ref|NP_001275105.1|2e-09ACRE 276-like protein [Solanum tuberosum] gb|ABK96801.1| ACRE 276-like protein [645009125 (7)ref|XP_009778431.1|3e-72PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]
JMFN039N17Sequence619009125 (7)ref|XP_009778431.1|5e-82PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]
JMFS147A12Sequence546009125 (7)ref|XP_009778431.1|4e-24PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]
JMSF003C20Sequence313011877 (5)768009125 (7)ref|XP_009778431.1|3e-121PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]
JMSF032P15Sequence667011877 (5)ref|XP_004233034.1|1e-21PREDICTED: U-box domain-containing protein 17 [Solanum lycopersicum]680009125 (7)ref|XP_009778431.1|1e-94PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF003C20+ CGNATTATGGACGAAATCGGGTGTCTAGAATTGATAGTTGGAGTTTTAAGGTTCGGG
                      ____________________________________________________________
consensus CGNATTATGGACGAAATCGGGTGTCTAGAATTGATAGTTGGAGTTTTAAGGTTCGGG
 
. : . : . : . : . : . :
rJMSF003C20+ CACACGTCGGAGGCGAGGGAAAACTCTGCAGCGACATTATTCAGCCTCTCCGCTGTTCAC
                      ____________________________________________________________
consensus CACACGTCGGAGGCGAGGGAAAACTCTGCAGCGACATTATTCAGCCTCTCCGCTGTTCAC
 
. : . : . : . : . : . :
rJMSF003C20+ GACTATAAGAAAAGAATTGCGGAACAAGATGGCGGAGTAGAAGCATTGGCGGGGCTGTTG
rJMSF032P15+ AGAAAAGAATTGCGGAACAAGATGGCGGAGTAGAAGCATTGGCGGGGCTGTTG
rJMFF033N22+ AGAAAAGAATTGCGGAACAAGATGGCGGAGTAGAAGCATTGGCGGGGCTGTTG
                      ____________________________________________________________
consensus GACTATAAGAAAAGAATTGCGGAACAAGATGGCGGAGTAGAAGCATTGGCGGGGCTGTTG
 
. : . : . : . : . : . :
rJMSF003C20+ AGAGATGGGTCACTGAGAGGGAAAAAGGATGCGGTGACAGCTCTATTCAACTTATCTACT
JMFN039N17- GAGATGGGTCACTGAGAGGGAAAAAGGATGCGGTGACAGCTCTATTCAACTTATCTACT
rJMSF032P15+ AGAGATGGGTCACTGAGAGGGAAAAAGGATGCGGTGACAGCTCTATTCAACTTATCTACT
rJMFF039D05+ TCAACTTATNTACT
rJMFF033N22+ AGAGATGGGTCACTGAGAGGGAAAAAGGATGCGGTGACAGCTNTATTCAACTTATCTACT
                      ____________________________________________________________
consensus AGAGATGGGTCACTGAGAGGGAAAAAGGATGCGGTGACAGCTCTATTCAACTTATCTACT
 
. : . : . : . : . : . :
rJMSF003C20+ CACACGGAGAACTGCGCGAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
JMFN039N17- CACACGGAGAACTGCGCGAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
rJMSF032P15+ CACACGGAGAACTGCGCGAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
rJMFF039D05+ CACACGGAGAACTGCGCGAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
rJMFF033N22+ CACACGGAGAACTGCGCGAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
rJMFF013J23+ GAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
                      ____________________________________________________________
consensus CACACGGAGAACTGCGCGAGAATGATAGATTCCGGAGCTGTCAACGCGTTAGTCGGGGCG
 
. : . : . : . : . : . :
rJMSF003C20+ TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
JMFN039N17- TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
rJMSF032P15+ TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
rJMFF039D05+ TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
rJMFF033N22+ TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
rJMFF013J23+ TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
                      ____________________________________________________________
consensus TTGGGATGCGAAGGGGTAGCCGAAGAAGCAGCCGGTGCGTTGGCACTGATTGTCAGGCAG
 
. : . : . : . : . : . :
rJMSF003C20+ CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
JMFN039N17- CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
rJMSF032P15+ CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
rJMFF039D05+ CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
rJMFF033N22+ CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
rJMFF013J23+ CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
                      ____________________________________________________________
consensus CCAATCGGGGCAGCCGCAGTTGGGAAGGAAGAAACAGCGGTGGCAGGGCTAATCGGGATG
 
. : . : . : . : . : . :
rJMSF003C20+ ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
JMFN039N17- ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
rJMSF032P15+ ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
rJMFF039D05+ ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
rJMFF033N22+ ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
rJMFF013J23+ ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
                      ____________________________________________________________
consensus ATGAGATGCGGGACGCCTAAAGGGAAAGAGAACGCAGTTGCAGCGTTGCTCGAGCTGTGT
 
. : . : . : . : . : . :
rJMSF003C20+ CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
JMFN039N17- CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
rJMSF032P15+ CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
rJMFF039D05+ CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
rJMFF033N22+ CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
rJMFF013J23+ CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
JMFS147A12- GGATTG
                      ____________________________________________________________
consensus CGAAGCGGCGGGGAAGCTGCAACCGAGAGGGTGTTAAAGGCACCTGCCTTGGCAGGATTG
 
. : . : . : . : . : . :
rJMSF003C20+ CTTCAGTCGCTGCTCTTCACCGGGACAAAACGCGCGCGGAGAAAAGCAGCATCGCTCGCC
JMFN039N17- CTTCAGTCGCTGCTCTTCACCGGGACAAAACGCGCGCGGAGAAAAGCAGCATCGCTCGCC
rJMSF032P15+ CTTCAGTCGCTGCTNTTCACCGGGACAAAACGCGCGCGGAGAAAAGCAGCATCGCTCGCC
rJMFF039D05+ CTTCAGTCGCTGCTNTTCACCGGGACAAAACGGGCGCGGAGAAAAGCAGCATCGCTCGCC
rJMFF033N22+ CTTCAGTCGCTGCTNTTCACCGGGACAAAACGCGCGCGGAGAAAAGCAGCATCGCTCGCC
rJMFF013J23+ CTTCAGTCGCTGCTNTTCACCGGGACAAAACGGGCGCGGAGAAAAGCAGCATCGCTCGCC
JMFS147A12- CTTCAGTCGCTGCTCTTCACCGGGACAAAACGCGCGCGGAGAAAAGCAGCATCGCTCGCC
                      ____________________________________________________________
consensus CTTCAGTCGCTGCTCTTCACCGGGACAAAACGCGCGCGGAGAAAAGCAGCATCGCTCGCC
 
. : . : . : . : . : . :
rJMSF003C20+ CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
JMFN039N17- CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
rJMSF032P15+ CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
rJMFF039D05+ CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
rJMFF033N22+ CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
rJMFF013J23+ CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
JMFS147A12- CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
                      ____________________________________________________________
consensus CGGGTTTTCCAGCGGTGTGAGCACGCCTCGATGCACTATGGCGGGTTGGGCGTAGGATAT
 
. : . : . : . : . : . :
rJMSF003C20+ GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
JMFN039N17- GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGNT
rJMSF032P15+ GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
rJMFF039D05+ GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
rJMFF033N22+ GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
rJMFF013J23+ GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
JMFS147A12- GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
                      ____________________________________________________________
consensus GCATTTGCAGGAAACTCGGCCACCACTAGAGATACAACTTTTGCGAGTGATGTCTCGGTG
 
. : . : . : . : . : . :
rJMSF003C20+ CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGT
JMFN039N17- GCAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
rJMSF032P15+ CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
rJMFF039D05+ CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
rJMFF033N22+ CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
rJMFF013J23+ CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
JMFS147A12- CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
                      ____________________________________________________________
consensus CAAATGTCCATTTCTGTGCCAGTATTATAATGGTAACCATCCATCATCTGTTGTTCTCCC
 
. : . : . : . : . : . :
JMFN039N17- CTC
rJMSF032P15+ CTCCATTATGTAACCTTTTT
rJMFF039D05+ CTCCATTATGTAACCTTTTTTTGTTTGTAATACTCGAAAAAAAAAATTCTTTTATTGATC
rJMFF033N22+ CTCCATTATGTAACCTTTTTTTGTTTGTAATACTCGAAAAAAAAAATTCTTTTATTGATC
rJMFF013J23+ CTCCATTATGTAACCTTTTTTTGTTTGTAATACTCGAAAAAAAAAATTCTTTTATTGATC
JMFS147A12- CTCCATTATGTAACCTTTTTTTGTTTGTAATACTCGAAAAAAAAAATTCTTTTATTGATC
                      ____________________________________________________________
consensus CTCCATTATGTAACCTTTTTTTGTTTGTAATACTCGAAAAAAAAAATTCTTTTATTGATC
 
. : . : . : . : . : . :
rJMFF039D05+ TATAAATGCCACAAAATAAAAAGATTAGAAA
rJMFF033N22+ TATAAATGCCACAAAATAAAAAGATTAGAAA
rJMFF013J23+ TATAAAT-CCACAAAATAAAAAGATTAGAAA
JMFS147A12- TATAAATGCCACAAAATAAAAAGATTAGAAATGCCATACATCAATTCAATTAGTCTCTCT
                      ____________________________________________________________
consensus TATAAATGCCACAAAATAAAAAGATTAGAAATGCCATACATCAATTCAATTAGTCTCTCT
 
. : . : . : . : . : . :
JMFS147A12- GTGCTTTTTTGTATTGGGGTGAAATATGATCATATAATGGAGTTGTAATGCCTTTTTGTT
                      ____________________________________________________________
consensus GTGCTTTTTTGTATTGGGGTGAAATATGATCATATAATGGAGTTGTAATGCCTTTTTGTT
 
. : . : . : . : . : . :
JMFS147A12- GCAAGGCTCATTAGATCCAACAGGAAATCATAGGCAGTGATAATGCAACTTGGTACTTGC
                      ____________________________________________________________
consensus GCAAGGCTCATTAGATCCAACAGGAAATCATAGGCAGTGATAATGCAACTTGGTACTTGC
 
. : . : . : . : . : . :
JMFS147A12- CATAGTTTATGAATCCGTATTTTATCCAAATTTTCATATTGTTCTAATATACGCATTCCG
                      ____________________________________________________________
consensus CATAGTTTATGAATCCGTATTTTATCCAAATTTTCATATTGTTCTAATATACGCATTCCG