Contig 009119:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS032C05+                                                                  ACATA
JMFS142H11+                                             TAGGGCTGGTAAAGTCTGCGAACATA
                      ____________________________________________________________
consensus                                               TAGGGCTGGTAAAGTCTGCGAACATA
 
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JMFS032C05+           AGTCTCCACAACCCTTCTCTGAAGGGTGTGATCGCTGTGATCAAAGAGACCTACAAGTGC
JMFS142H11+           AGTCTCCACAACCCTTCTCTGAAGGGTGTGATCGCTGTGATCAAAGAGACCTACAAGTGC
                      ____________________________________________________________
consensus             AGTCTCCACAACCCTTCTCTGAAGGGTGTGATCGCTGTGATCAAAGAGACCTACAAGTGC
 
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JMFS032C05+           ATCTTCGACTGCCAAAGGAGCACTCACTAGAGCTTCCATTCTTTCATTTATGGCACTTTT
JMFS142H11+           ATCTTCGACTGCCAAAGGAGCACTCACTAGAGCTTCCATTCTTTCATTTATGGCACTTTT
                      ____________________________________________________________
consensus             ATCTTCGACTGCCAAAGGAGCACTCACTAGAGCTTCCATTCTTTCATTTATGGCACTTTT
 
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JMFS032C05+           CCTCTTAGGAGTGTCCATATGTTCACCTTCTTCAGTGAACATTTCTAACTCGGAAAGACT
JMFS142H11+           CCTCTTAGGAGTGTCCATATGTTCACCTTCTTCAGTGAACATTTCTAACTCGGAAAGACT
                      ____________________________________________________________
consensus             CCTCTTAGGAGTGTCCATATGTTCACCTTCTTCAGTGAACATTTCTAACTCGGAAAGACT
 
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JMFS032C05+           TCTTGCAATGCTGGAACGCAATTCACTCAGTTTTGTTTGTTCAAGAAGCTGACTTGCCTT
JMFS142H11+           TCTTGCAATGCTGGAACGCAATTCACTCAGTTTTGTTTGTTCAAGAAGCTGACTTGCCTT
                      ____________________________________________________________
consensus             TCTTGCAATGCTGGAACGCAATTCACTCAGTTTTGTTTGTTCAAGAAGCTGACTTGCCTT
 
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JMFS032C05+           GAGAGCCAACTCAGAATAGTTTGTATGATTGAGCGAAGAGAAACGAATTAATTTATCCCG
JMFS142H11+           GAGAGCCAACTCAGAATAGTTTGTATGATTGAGCGAAGAGAAACGAATTAATTTATCCCG
                      ____________________________________________________________
consensus             GAGAGCCAACTCAGAATAGTTTGTATGATTGAGCGAAGAGAAACGAATTAATTTATCCCG
 
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JMFS032C05+           GTAAGCTGCAGGACTAGGATACACCAGTTGCTCCATGAGACTTAATATCAGTTTATTTTT
JMFS142H11+           GTAAGCTGCAGGACTAGGATACACCAGTTGCTCCATGAGACTTAATATCAGTTTATTTTT
                      ____________________________________________________________
consensus             GTAAGCTGCAGGACTAGGATACACCAGTTGCTCCATGAGACTTAATATCAGTTTATTTTT
 
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JMFS032C05+           ACGCTTGACACCCTGATGGGAAAGTACAATATCTACAACCTTCACGGGGTCTTTTTTATA
JMFS142H11+           ACGCTTGACACCCTGATGGGAAAGTACAATATCTACAACCTTCACGGGGTCTTTTTTATA
                      ____________________________________________________________
consensus             ACGCTTGACACCCTGATGGGAAAGTACAATATCTACAACCTTCACGGGGTCTTTTTTATA
 
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JMFS032C05+           TTCAAGTCGCAGGCGTTCAATAACATCAGCCTGGATGTTGTCACTAAACAATTCTTCGAC
JMFS142H11+           TTCAAGTCGCAGGCGTTCAATAACATCAGCCTGGATGTTGTCACTAAACAATTCTTCGAC
                      ____________________________________________________________
consensus             TTCAAGTCGCAGGCGTTCAATAACATCAGCCTGGATGTTGTCACTAAACAATTCTTCGAC
 
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JMFS032C05+           AGAAAGGTATTCTTGGAAAAGGGACTGCACAATAACACGGGCATGACTCTCTCTTCCCC 
JMFS142H11+           AGAAAGGTATTCTTGGAAAAGGGACTGCACAATAACACGGGCATGACTCTCTCTTCCCCC
                      ____________________________________________________________
consensus             AGAAAGGTATTCTTGGAAAAGGGACTGCACAATAACACGGGCATGACTCTCTCTTCCCCC
 
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JMFS142H11+           TTCATAAGACTTCACAAGACTCATTAATGGTTCAACTAGTCTTTCTTGAGCTCCTTTTTC
                      ____________________________________________________________
consensus             TTCATAAGACTTCACAAGACTCATTAATGGTTCAACTAGTCTTTCTTGAGCTCCTTTTTC