| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS026B05 | Sequence | 629 | 009115 (5) | ref|XP_011028654.1| | 2e-108 | PREDICTED: coatomer subunit alpha-1 [Populus euphratica] | |||||
| JMFS038H02 | Sequence | 415 | 009115 (5) | ref|XP_011028654.1| | 2e-83 | PREDICTED: coatomer subunit alpha-1 [Populus euphratica] | |||||
| JMFS061B11 | Sequence | 634 | 009115 (5) | ref|XP_005851353.1| | 1e-114 | hypothetical protein CHLNCDRAFT_137537 [Chlorella variabilis] gb|EFN59251.1| hyp | |||||
| JMFS138H06 | Sequence | 599 | 009115 (5) | ref|XP_005851353.1| | 8e-115 | hypothetical protein CHLNCDRAFT_137537 [Chlorella variabilis] gb|EFN59251.1| hyp | |||||
| JMSF027B11 | Sequence | 604 | 009115 (5) | ref|XP_011028654.1| | 1e-101 | PREDICTED: coatomer subunit alpha-1 [Populus euphratica] | 732 | 013147 (2) | ref|XP_009794496.1| | 2e-131 | PREDICTED: coatomer subunit alpha-1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS061B11+ TCAGGGCACCAATATCCCAAACCCGAATTGTCTGATCCAAAGATGCTGAGACAACCAAAT
JMFS026B05+ GATCCAAAGATGCTGAGACAACCAAAT
JMFS138H06+ CAGGGCACCAATATCCCAAACCCGAATTGTCTGATCCAAAGATGCTGAGACAACCAAAT
____________________________________________________________
consensus TCAGGGCACCAATATCCCAAACCCGAATTGTCTGATCCAAAGATGCTGAGACAACCAAAT
. : . : . : . : . : . :
JMFS061B11+ CTTCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAA
JMFS026B05+ CTTCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAA
JMSF027B11+ GGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAA
JMFS038H02+ CAGTCAAGACAGAAA
JMFS138H06+ CTTCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAA
____________________________________________________________
consensus CTTCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAA
. : . : . : . : . : . :
JMFS061B11+ TACATGTACGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGAACTAACAA
JMFS026B05+ TACATGTACGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGAACTAACAA
JMSF027B11+ TACATGTACGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGAACTAACAA
JMFS038H02+ TACATGTACGAGACTGCCAGTTCCATATCGTGATTGTCTGGTCATCACTTGAACTAACAA
JMFS138H06+ TACATGTACGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGAACTAACAA
____________________________________________________________
consensus TACATGTACGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGAACTAACAA
. : . : . : . : . : . :
JMFS061B11+ TCCAGGGGTATTCGTGATGAAATTGAACAGTCCGAATGTAATCAAGATGACCAAGGAGGG
JMFS026B05+ TCCAGGGGTATTCGTGATGAAATTGAACAGTCCGAATGTAATCAAGATGACCAAGGAGGG
JMSF027B11+ TCCAGGGGTATTCGTGATGAAATTGAACAGTCCGAATGTAATCAAGATGACCAAGGAGGG
JMFS038H02+ TCCAGGGGTATTCGTGATGAAATTGAACAGTCCGAGTGTAATCAAGATGAGCAAGGAGGG
JMFS138H06+ TCCAGGGGTATTCGTGATGAAATTGAACAGTCCGAATGTAATCAAGATGACCAAGGAGGG
____________________________________________________________
consensus TCCAGGGGTATTCGTGATGAAATTGAACAGTCCGAATGTAATCAAGATGACCAAGGAGGG
. : . : . : . : . : . :
JMFS061B11+ TAAACAGACACCTATGCTGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCAG
JMFS026B05+ TAAACAGACACCTATGCTGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCAG
JMSF027B11+ TAAACAGACACCTATGCTGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCAG
JMFS038H02+ TAAACAGGCACCTATGCTGCTTGTAATTCCGTACCTTAATTTTATAATCATCACCTCCAG
JMFS138H06+ TAAACAGACACCTATGCTGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCAG
____________________________________________________________
consensus TAAACAGACACCTATGCTGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCAG
. : . : . : . : . : . :
JMFS061B11+ ACACGAAGAGCGGCTGCGACTTGTGGAAGTGGACGCCCCTGACGGGGCCATCATGCTCGT
JMFS026B05+ ACACGAAGAGCGGCTGCGACTTGTGGAAGTGGACGCCCCTGACGGGGCCATCATGCTCGT
JMSF027B11+ ACACGAAGAGCGGCTGCGACTTGTGGAAGTGGACGCCCCTGACGGGGCCATCATGCTCGT
JMFS038H02+ ACACGAAGAGCGGCTGCGACTTGTGGAAGTGGACGCCCCTGACGGGGCCATCATGCTCGT
JMFS138H06+ ACACGAAGAGCGGCTGCGACTTGTGGAAGTGGACGCCCCTGACGGGGCCATCATGCTCGT
____________________________________________________________
consensus ACACGAAGAGCGGCTGCGACTTGTGGAAGTGGACGCCCCTGACGGGGCCATCATGCTCGT
. : . : . : . : . : . :
JMFS061B11+ CGAAGCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGA
JMFS026B05+ CGAAGCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGA
JMSF027B11+ CGAAGCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGA
JMFS038H02+ GGAAGCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGA
JMFS138H06+ CGAAGCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGA
____________________________________________________________
consensus CGAAGCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGA
. : . : . : . : . : . :
JMFS061B11+ GACTGGCGAGGATCCATGGCCGCTTGCTGTGGAAACTCAGCCCCTTGACTCGATTACTCT
JMFS026B05+ GACTGGCGAGGATCCATGGCCGCTTGCTGTGGAAACTCAGCCCCTTGACTCGATTACTCT
JMSF027B11+ GACTGGCGAGGATCCATGGCCGCTTGCTGTGGAAACTCAGCCCCTTGACTCGATTACTCT
JMFS038H02+ GACTGGCGAGGATCCATGGCCGCTTGCTGTGGAAACTCAGCCCCTTGACTCGATGACTGT
JMFS138H06+ GACTGGCGAGGATCCATGGCCGCTTGCTGTGGAAACTCAGCCCCTTGACTCGATTACTCT
____________________________________________________________
consensus GACTGGCGAGGATCCATGGCCGCTTGCTGTGGAAACTCAGCCCCTTGACTCGATTACTCT
. : . : . : . : . : . :
JMFS061B11+ TCGTCTCGAACTTCGTCA
JMFS026B05+ TCGTCTCGAACTTCGTCA
JMSF027B11+ TCGTCTCGAACTTCGTCA
JMFS038H02+ TCGTCTCGAACTTCGTCAGCATCTTCTCCCTTTCCTTTCC
JMFS138H06+ TCGTCTCGAACTTCGTCAGCATCTTCTCCCTTTCCTTTCCCCACGGCTTCACAAATCTGA
____________________________________________________________
consensus TCGTCTCGAACTTCGTCAGCATCTTCTCCCTTTCCTTTCCCCACGGCTTCACAAATCTGA
. : . : . : . : . : . :
JMFS138H06+ AACCCTAGCTGGCCGGCGAGATCGAATCGGAGTCAGATCTGAGACGGGCGGTGCATTTGA
____________________________________________________________
consensus AACCCTAGCTGGCCGGCGAGATCGAATCGGAGTCAGATCTGAGACGGGCGGTGCATTTGA