Contig 009113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045A19Sequence641009113 (3)ref|NP_001234686.1|1e-15protein phosphatase 2C ABI2 homolog [Solanum lycopersicum] dbj|BAI39595.1| prote605008338 (2)ref|XP_011079888.1|9e-33PREDICTED: protein phosphatase 2C 16-like [Sesamum indicum] ref|XP_011079897.1|
JMFS019G06Sequence557009113 (3)ref|XP_006342955.1|1e-11PREDICTED: protein phosphatase 2C 16-like isoform X1 [Solanum tuberosum] ref|XP
JMFS137E12Sequence592009113 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045A19+ GAATCATGGCATCACTAAAGGTCAGATCT
                      ____________________________________________________________
consensus GAATCATGGCATCACTAAAGGTCAGATCT
 
. : . : . : . : . : . :
JMFF045A19+ TGCCAAGTTTCAGCACAGACTCCGAGAGATCAGATCCTCCTACCTCTCCCGATGCAAACA
                      ____________________________________________________________
consensus TGCCAAGTTTCAGCACAGACTCCGAGAGATCAGATCCTCCTACCTCTCCCGATGCAAACA
 
. : . : . : . : . : . :
JMFF045A19+ AGGAACCGATACTAACATCAACTTTCACGCCATCCCAACTAGAATTGGAGTCAGCATGCA
                      ____________________________________________________________
consensus AGGAACCGATACTAACATCAACTTTCACGCCATCCCAACTAGAATTGGAGTCAGCATGCA
 
. : . : . : . : . : . :
JMFF045A19+ ACAACGATGCTGGCTCTGCAAGCAAACTCGCGGCATCAGTCACTAGTTTCAGCCTAGTAA
JMFS019G06+ GCAAGCAAACTCGCGGCATCAGTCACTAGTTTCAGCCTAGTAA
                      ____________________________________________________________
consensus ACAACGATGCTGGCTCTGCAAGCAAACTCGCGGCATCAGTCACTAGTTTCAGCCTAGTAA
 
. : . : . : . : . : . :
JMFF045A19+ TTTCCACGTGGTTCGACATTACAGGGCTATCAACAATCGTGTTACTTAAGCTAAGGGTAA
JMFS019G06+ TTTCCACGTGGTTCGACATTACAGGGCTATCAACAATCGTGTTACTTAAGCTAAGGGTAA
                      ____________________________________________________________
consensus TTTCCACGTGGTTCGACATTACAGGGCTATCAACAATCGTGTTACTTAAGCTAAGGGTAA
 
. : . : . : . : . : . :
JMFF045A19+ CGGCAACAGCTGGAGACATCTCTTCCATTAATTCCCACTTTTGGAAATTAACAGCACAAT
JMFS019G06+ CGGCAACAGCTGGAGACATCTCTTCCATTAATTCCCACTTTTGGAAATTAACAGCACAAT
                      ____________________________________________________________
consensus CGGCAACAGCTGGAGACATCTCTTCCATTAATTCCCACTTTTGGAAATTAACAGCACAAT
 
. : . : . : . : . : . :
JMFF045A19+ ATAAACAAAAAATCTAGCAAAGCCACAAGTCAATCACACCTGAGCTTTCTCAACTTCTTC
JMFS019G06+ ATAAACAAAAAATCTAGCAAAGCCACAAGTCAATCACACCTGAGCTTTCTCAACTTCTTC
JMFS137E12+ CTGAGCTTTCTCAACTTCTTC
                      ____________________________________________________________
consensus ATAAACAAAAAATCTAGCAAAGCCACAAGTCAATCACACCTGAGCTTTCTCAACTTCTTC
 
. : . : . : . : . : . :
JMFF045A19+ TGCCTAAACATTGATCCCGTCCCCCCCGTCCTATCACCATTTAGTACAATAAAAAGCAAG
JMFS019G06+ TGCCTAAACATTGATCCCGTCCCCCCCGTCCTATCACCATTTAGTACAATAAAAAGCAAG
JMFS137E12+ TGCCTAAACATTGATCCCGTCCCCCCCGTCCTATCACCATTTAGTACAATAAAAAGCAAG
                      ____________________________________________________________
consensus TGCCTAAACATTGATCCCGTCCCCCCCGTCCTATCACCATTTAGTACAATAAAAAGCAAG
 
. : . : . : . : . : . :
JMFF045A19+ GATGATGAGGAAAGATACAGCAAATCAGCAACAAGGCCTCAGTCAACAGCCTCCTGAAGA
JMFS019G06+ GATGATGAGGAAAGATACAGCAAATCAGCAACAAGGCCTCAGTCAACAGCCTCCTGAAGA
JMFS137E12+ GATGATGAGGAAAGATACAGCAAATCAGCAACAAGGCCTCAGTCAACAGCCTCCTGAAGA
                      ____________________________________________________________
consensus GATGATGAGGAAAGATACAGCAAATCAGCAACAAGGCCTCAGTCAACAGCCTCCTGAAGA
 
. : . : . : . : . : . :
JMFF045A19+ TTTGAAGATTTCCAAGAGCAAACTAAAGGTGGACAGAGC
JMFS019G06+ TTTGAAGATTTCCAAGAGCAAACTAAAGGTGGACAGAGC
JMFS137E12+ TTTGAAGATTTCCAAGAGCAAACTAAAGGTGGACAGAGCAACATAGAATAGAAACCCCAA
                      ____________________________________________________________
consensus TTTGAAGATTTCCAAGAGCAAACTAAAGGTGGACAGAGCAACATAGAATAGAAACCCCAA
 
. : . : . : . : . : . :
JMFS137E12+ ATTGCTGATGGCTCACCAAGTATGGGCAGCAATGTCCTCTTTCTTTTCCCTTAAAAATTT
                      ____________________________________________________________
consensus ATTGCTGATGGCTCACCAAGTATGGGCAGCAATGTCCTCTTTCTTTTCCCTTAAAAATTT
 
. : . : . : . : . : . :
JMFS137E12+ TATTTTGCCCCTTCTTTTCTGTGCCTGGGAGTCTTGTCTTGAAGGAGGAAAGAGAAAGAG
                      ____________________________________________________________
consensus TATTTTGCCCCTTCTTTTCTGTGCCTGGGAGTCTTGTCTTGAAGGAGGAAAGAGAAAGAG
 
. : . : . : . : . : . :
JMFS137E12+ ATGTTTGTGGAAAAGCTTTTTACTATTGGGTACATGGAAGTGACACGTATGCATTCAATT
                      ____________________________________________________________
consensus ATGTTTGTGGAAAAGCTTTTTACTATTGGGTACATGGAAGTGACACGTATGCATTCAATT
 
. : . : . : . : . : . :
JMFS137E12+ ATCTAACTCCAATCAATGCTCTGGACACAGAAAAATGCTTTGGCACCACAGTGCCTTCTT
                      ____________________________________________________________
consensus ATCTAACTCCAATCAATGCTCTGGACACAGAAAAATGCTTTGGCACCACAGTGCCTTCTT
 
. : . : . : . : . : . :
JMFS137E12+ CTTCTTGCCATCACTATTAATATTTGTTTTTTATTTTAATAAAAATTCCATTTTTATCTT
                      ____________________________________________________________
consensus CTTCTTGCCATCACTATTAATATTTGTTTTTTATTTTAATAAAAATTCCATTTTTATCTT