Contig 009099:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS125F11Sequence576009099 (3)
JMSF005N07Sequence248009099 (3)548002438 (16)ref|XP_007201261.1|1e-41hypothetical protein PRUPE_ppa013259mg [Prunus persica] gb|EMJ02460.1| hypotheti
JMSF034E02Sequence687009099 (3)687006956 (9)ref|XP_004235015.1|5e-36PREDICTED: serine/arginine-rich splicing factor SR34A [Solanum lycopersicum] re

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034E02+ AATATGCTTCACTTAAGTACAACCTGAAGCAGAATCCACATAGCCAATTCACCCTTA
                      ____________________________________________________________
consensus AATATGCTTCACTTAAGTACAACCTGAAGCAGAATCCACATAGCCAATTCACCCTTA
 
. : . : . : . : . : . :
JMSF034E02+ TAGACTAGCCCACTAGCATAAGCACAAAACAACAGAGAGAGAGTAGCAAATTTTGTAATA
                      ____________________________________________________________
consensus TAGACTAGCCCACTAGCATAAGCACAAAACAACAGAGAGAGAGTAGCAAATTTTGTAATA
 
. : . : . : . : . : . :
JMSF034E02+ CAGATTTTTAAAAATGCACTCTTTCATACATTCAAATACTCAAATGATGAAAAGAACACT
JMFS125F11+ CATACATTCAAATACTCAAATGATGAAAAGAACACT
                      ____________________________________________________________
consensus CAGATTTTTAAAAATGCACTCTTTCATACATTCAAATACTCAAATGATGAAAAGAACACT
 
. : . : . : . : . : . :
JMSF034E02+ ATGCATCAGAGTAATGCTCAAAAATCTAGAATTTTGCAAAATACTGGTGAAGAGTCACTT
JMFS125F11+ ATGCATCAGAGTAATGCTCAAAAATCTAGAATTTTGCAAAATACTGGTGAAGAGTCACTT
                      ____________________________________________________________
consensus ATGCATCAGAGTAATGCTCAAAAATCTAGAATTTTGCAAAATACTGGTGAAGAGTCACTT
 
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JMSF034E02+ TCAACCCTCGATTTAGAATGAAAAAAATCTGTGAGGAAACCCTTAAAATAGAAAAGCTCT
JMFS125F11+ TCAACCCTCGATTTAGAATGAAAAAAATCTGTGAGGAAACCCTTAAAATAGAAAAGCTCT
                      ____________________________________________________________
consensus TCAACCCTCGATTTAGAATGAAAAAAATCTGTGAGGAAACCCTTAAAATAGAAAAGCTCT
 
. : . : . : . : . : . :
JMSF034E02+ TTATACATTCCATAAAAAATCAAAACATCACAAAAGATTCGAGCTTTATTTGTGAATATT
JMFS125F11+ TTATACATTCCATAAAAAATCAAAACATCACAAAAGATTCGAGCTTTATTTGTGAATATT
                      ____________________________________________________________
consensus TTATACATTCCATAAAAAATCAAAACATCACAAAAGATTCGAGCTTTATTTGTGAATATT
 
. : . : . : . : . : . :
JMSF034E02+ GAAGAACAGACCAAAATTGAGCCGACAATGCAAAAGCACGCAGCAAATTAAGAAAAAAAA
JMFS125F11+ GAAGAACAGACCAAAATTGAGCCGACAATGCAAAAGCACGCAGCAAATTAAGAAAAAAAA
                      ____________________________________________________________
consensus GAAGAACAGACCAAAATTGAGCCGACAATGCAAAAGCACGCAGCAAATTAAGAAAAAAAA
 
. : . : . : . : . : . :
JMSF005N07+ ATACAAATGGAGAAACTGTAACTTCTCTCGAAATAATCAGCACAGCAT
JMSF034E02+ AGTGACGAACGCACACAAATGGAGAAACTGTAACTTCTCTCGAAATAATCAGCACAGCAT
JMFS125F11+ AGTGACGAACGCACACAAATGGAGAAACTGTAACTTCTCTCGAAATAATCAGCACAGCAT
                      ____________________________________________________________
consensus AGTGACGAACGCACACAAATGGAGAAACTGTAACTTCTCTCGAAATAATCAGCACAGCAT
 
. : . : . : . : . : . :
JMSF005N07+ TTGCAGCCACCCTAGAAGTTGAGCTAAAGAGAGAACAATGGCGTGACTGAGCTGACGTTG
JMSF034E02+ TTGCAGCCACCCTAGAAGTTGAGCTAAAGAGAGAACAATGGCGTGACTGAGCTGACGTTG
JMFS125F11+ TTGCAGCCACCCTAGAAGTTGAGCTAAAGAGAGAACAATGGCGTGACTGAGCTGACGTTG
                      ____________________________________________________________
consensus TTGCAGCCACCCTAGAAGTTGAGCTAAAGAGAGAACAATGGCGTGACTGAGCTGACGTTG
 
. : . : . : . : . : . :
JMSF005N07+ TTCGATTCCCTCACGTCGGTTCAACGAGTTGGGATTCCTAAACGTAGAAGTGTAGAGGAT
JMSF034E02+ TTCGATTCCCTCACGTCGGTTCAACGAGTTGGGATTCCTAAACGTAGAAGTGTAGAGGAT
JMFS125F11+ TTCGATTCCCTCACGTCGGTTCAACGAGTTGGGATTCCTAAACGTAGAAGTGTAGAGGAT
                      ____________________________________________________________
consensus TTCGATTCCCTCACGTCGGTTCAACGAGTTGGGATTCCTAAACGTAGAAGTGTAGAGGAT
 
. : . : . : . : . : . :
JMSF005N07+ CTGGATAAAATACCTGAGATTC
JMSF034E02+ CTGGATAAAATACCTGAGATTCGGTTGGTGTCGAAGCAGAATTATTAGATTTGTTCGAGC
JMFS125F11+ CTGGATAAAATACCTGAGATTCGGTTGGTGTCGAAGCAGAATTATTAGATTTGTTCGAGC
                      ____________________________________________________________
consensus CTGGATAAAATACCTGAGATTCGGTTGGTGTCGAAGCAGAATTATTAGATTTGTTCGAGC
 
. : . : . : . : . : . :
JMSF034E02+ TCCTCTGACGGGGACTGTCTCGTGCTCCT
JMFS125F11+ TCCTCTGACGGGGACTGTCTCGTGCTCCTGATTGATGTGGATTTGGGCGAATCTAGGGTT
                      ____________________________________________________________
consensus TCCTCTGACGGGGACTGTCTCGTGCTCCTGATTGATGTGGATTTGGGCGAATCTAGGGTT