Contig 009082:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF010K09-                                                      ATAAGAAATTGCTGTCG
rJMSF010K09+                                                     ATAAGAAATTGCTGTCG
                      ____________________________________________________________
consensus                                                        ATAAGAAATTGCTGTCG
 
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JMSF010K09-           TTTGACTCCTCCTTCAGTTGAAAACTGGTTTCCAGGAAAACCATGTGTGACGGGCTGGCT
rJMSF010K09+          TTTGACTCCTCCTTCAGTTGAAAACTGGTTTCCAGGAAAACCATGTGTGACGGGCTGGCT
                      ____________________________________________________________
consensus             TTTGACTCCTCCTTCAGTTGAAAACTGGTTTCCAGGAAAACCATGTGTGACGGGCTGGCT
 
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JMSF010K09-           CAAGCTTGAAAAGACGGTAAAAGGTTGTATTTTCCCAACTGCAAAAGGTTGGCTGAGCTT
rJMSF010K09+          CAAGCTTGAAAAGACGGTAAAAGGTTGTATTTTCCCAACTGCAAAAGGTTGGCTGAGCTT
                      ____________________________________________________________
consensus             CAAGCTTGAAAAGACGGTAAAAGGTTGTATTTTCCCAACTGCAAAAGGTTGGCTGAGCTT
 
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JMSF010K09-           CCAGGTCTAGAGAGAGTCTGGAATCCTTACAAATTGCAGTGCTTTGGGGATGGATTCCTC
rJMSF010K09+          CCAGGTCTAGAGAGAGTCTGGAATCCTTACAAATTGCAGTGCTTTGGGGATGGATTCCTC
JMFS111H04+                             TGGAATCCTTACAAATTGCAGTGCTTTGGGGATGGATTCCTC
                      ____________________________________________________________
consensus             CCAGGTCTAGAGAGAGTCTGGAATCCTTACAAATTGCAGTGCTTTGGGGATGGATTCCTC
 
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JMSF010K09-           TGATCAGATTGAAAAGTGGTTGCAGTTCTTATCGCTACGCTACCAGAAGCAAAACCAGTG
rJMSF010K09+          TGATCAGATTGAAAAGTGGTTGCAGTTCTTATCGCTACGCTACCAGAAGCAAAACCNGTG
JMFS111H04+           TGATCAGATTGAAAAGTGGTTGCAGTTCTTATCGCTACGCTACCAGAAGCAAAACCAGTG
                      ____________________________________________________________
consensus             TGATCAGATTGAAAAGTGGTTGCAGTTCTTATCGCTACGCTACCAGAAGCAAAACCAGTG
 
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JMSF010K09-           GCGCCTCAGCTTGGGTTGGAGATATATGAATAATGCAGTGTGGAGAAGAAGAAGAAGAAG
rJMSF010K09+          GCGCCTCAGCTTGGGTTGGAGATATATGAATAATGCNGTGTGGAGAAGAAGAAGAAGAAG
JMFS111H04+           GCGCCTCAGCTTGGGTTGGAGATATATGAATAATGCAGTGTGGAGAAGAAGAAGAAGAAG
                      ____________________________________________________________
consensus             GCGCCTCAGCTTGGGTTGGAGATATATGAATAATGCAGTGTGGAGAAGAAGAAGAAGAAG
 
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JMSF010K09-           AAGCTAAGTATGGAAGATCAGAGTTGATTTTGAGGTGGCAGTAATGGTGGGGGAGATGGC
rJMSF010K09+          AAGCTAAGTATGGAAGATCAGAGTTGATTTTGAGGTGGCNGTAATGGTGGGGGAGATGGC
JMFS111H04+           AAGCTAAGTATGGAAGATCAGAGTTGATTTTGAGGTGGCAGTAATGGTGGGGGAGATGGC
                      ____________________________________________________________
consensus             AAGCTAAGTATGGAAGATCAGAGTTGATTTTGAGGTGGCAGTAATGGTGGGGGAGATGGC
 
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JMSF010K09-           CATTCCTGCAATTTGATCAACCTCAACTACATTTGGTAGAGTAGCATCATGTTTGGGCTT
rJMSF010K09+          CNTTCCTGCAATTTGATCAACCTCAACTACATTTGGTAGAGTAGCATCATGTTTGGGCTT
JMFS111H04+           CATTCCTGCAATTTGATCAACCTCAACTACATTTGGTAGAGTAGCATCATGTTTGGGCTT
                      ____________________________________________________________
consensus             CATTCCTGCAATTTGATCAACCTCAACTACATTTGGTAGAGTAGCATCATGTTTGGGCTT
 
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JMSF010K09-           AGCAACAACTAACCATCAACTTTGGGGCGACAAGAAAAACTCACAGATACTATTTGTCTA
rJMSF010K09+          AGCAACAACTAACCATCAACTTTGGGGCGACAAGAAAAACTCNCNGATACTATTTGTCTA
JMFS111H04+           AGCAACAACTAACCATCAACTTTGGGGCGACAAGAAAAACTCACAGATACTATTTGTCTA
                      ____________________________________________________________
consensus             AGCAACAACTAACCATCAACTTTGGGGCGACAAGAAAAACTCACAGATACTATTTGTCTA
 
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JMSF010K09-           TT                                                          
rJMSF010K09+          TTTGATGGTATCCTAAATTCTGTAGGATGGGTTCAAAAAAAGGATATTTGTAATAATCAA
JMFS111H04+           TTTGATGGTATCCTAAATTCTGTAGGATGGGTTCAAAAAAAGGATATTTGTAATAATCAA
                      ____________________________________________________________
consensus             TTTGATGGTATCCTAAATTCTGTAGGATGGGTTCAAAAAAAGGATATTTGTAATAATCAA
 
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rJMSF010K09+          ATTCATAGTGTAGTTTTCTACGGGAATCATGTTATTGCTTCATCCCNCTCAACTATCTTT
JMFS111H04+           ATTCATAGTGTAGTTTTCTACGGGAATCATGTTATTGCTTCATCCCACTCAACTATCTTT
                      ____________________________________________________________
consensus             ATTCATAGTGTAGTTTTCTACGGGAATCATGTTATTGCTTCATCCCACTCAACTATCTTT
 
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rJMSF010K09+          TTGGGACATTTTTTT                                             
JMFS111H04+           TTGGGACATTTTTTTTTTCCTTTTTTAATCCATGGGTATTGCAAGGATGACAAAATTTGA
                      ____________________________________________________________
consensus             TTGGGACATTTTTTTTTTCCTTTTTTAATCCATGGGTATTGCAAGGATGACAAAATTTGA
 
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JMFS111H04+           CACCATTCATCTTGTTGAGTAAATGTTTTTTAAAATAAAGTTTAATGTTAATTTAGTATT
                      ____________________________________________________________
consensus             CACCATTCATCTTGTTGAGTAAATGTTTTTTAAAATAAAGTTTAATGTTAATTTAGTATT