Contig 009079:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS041E09Sequence621009079 (2)ref|XP_009770560.1|168PREDICTED: uncharacterized protein LOC104221239 [Nicotiana sylvestris]
JMFS109G06Sequence605009079 (2)ref|XP_009373901.1|8e-37PREDICTED: protein translocase subunit SECA2, chloroplastic-like isoform X3 [Py

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS041E09+ AATTCATTCTTTACCCCCTCTGCCATCCCATATAATACTCTCAACA
JMFS109G06+ TCAACA
                      ____________________________________________________________
consensus AATTCATTCTTTACCCCCTCTGCCATCCCATATAATACTCTCAACA
 
. : . : . : . : . : . :
JMFS041E09+ CTTTCACTTCATAACTATACTTAAACTTAGAACAGCTCTCGTTTTTGTCAATAAAGATCC
JMFS109G06+ CTTTCACTTCATAACTATACTT-AACTTAGAACAGCTCTCGTTTTTGTCAATAAAGATCC
                      ____________________________________________________________
consensus CTTTCACTTCATAACTATACTTAAACTTAGAACAGCTCTCGTTTTTGTCAATAAAGATCC
 
. : . : . : . : . : . :
JMFS041E09+ CAACTTTAACCAGACATACTTCCTCTTTCTCTACGGAACATCTATTGCTCCTACTATCAT
JMFS109G06+ CAACTTTAACCAGACATACTTCCTCTTTCTCTACGGAACATCTATTGCTCCTACTATCAT
                      ____________________________________________________________
consensus CAACTTTAACCAGACATACTTCCTCTTTCTCTACGGAACATCTATTGCTCCTACTATCAT
 
. : . : . : . : . : . :
JMFS041E09+ GATTTCTCAAACACCCATACAACAAATAACAGAAATCATCGGGACTTTTAGTACCAGAAT
JMFS109G06+ GATTTCTCAAACACCCATACAACAAATAACAGAAATCATCGGGACTTTTAGTACCAGAAT
                      ____________________________________________________________
consensus GATTTCTCAAACACCCATACAACAAATAACAGAAATCATCGGGACTTTTAGTACCAGAAT
 
. : . : . : . : . : . :
JMFS041E09+ TTCGTGGTTCAGTGGATAAGCTGTTCTCTGGGAGAAGCCATGGCTTCCAATACAAGTAGA
JMFS109G06+ TTCGTGGTTCAGTGGATAAGCTGTTCTCTGGGAGAAGCCATGGCTTCCAATACAAGTAGA
                      ____________________________________________________________
consensus TTCGTGGTTCAGTGGATAAGCTGTTCTCTGGGAGAAGCCATGGCTTCCAATACAAGTAGA
 
. : . : . : . : . : . :
JMFS041E09+ ATTCACGAGACCACAAAACGGGTAGGAAAACTGCGGAGTCCTTTTCGGGTTCCCGCAGCG
JMFS109G06+ ATTCACGAGACCACAAAACGGGTAGGAAAACTGCGGAGTCCTTTTCGGGTTCCCGCAGCG
                      ____________________________________________________________
consensus ATTCACGAGACCACAAAACGGGTAGGAAAACTGCGGAGTCCTTTTCGGGTTCCCGCAGCG
 
. : . : . : . : . : . :
JMFS041E09+ AATTTGCGGTATTGGGTGGTGGAGAGTTGTGGTTGTGGAGGAGGGAGGAGAGGCGGAGGA
JMFS109G06+ AATTTGCGGTATTGGGTGGTGGAGAGTTGTGGTTGTGGAGGAGGGAGGAGAGGCGGAGGA
                      ____________________________________________________________
consensus AATTTGCGGTATTGGGTGGTGGAGAGTTGTGGTTGTGGAGGAGGGAGGAGAGGCGGAGGA
 
. : . : . : . : . : . :
JMFS041E09+ GGTCGATGTTCTTGGGGAGAGAGGAGAGGGGTTTGGGTAGCTTCACAAGCTGAGTACAGG
JMFS109G06+ GGTCGATGTTCTTGGGGAGAGAGGAGAGGGGTTTGGGTAGCTTCACAAGCTGAGTACAGG
                      ____________________________________________________________
consensus GGTCGATGTTCTTGGGGAGAGAGGAGAGGGGTTTGGGTAGCTTCACAAGCTGAGTACAGG
 
. : . : . : . : . : . :
JMFS041E09+ CGGGGCAGCGGATGGTGTGAGGGAAGGCGTTTGGGAGCTGGGCGAGACAGGGCTCGCAGG
JMFS109G06+ CGGGGCAGCGGATGGTGTGAGGGAAGGCGTTTGGGAGCTGGGCGAGACAGGGCTCGCAGG
                      ____________________________________________________________
consensus CGGGGCAGCGGATGGTGTGAGGGAAGGCGTTTGGGAGCTGGGCGAGACAGGGCTCGCAGG
 
. : . : . : . : . : . :
JMFS041E09+ CAGAGTGGCCACAGGCGAGTACACGCGGGATCGTTGCAACGGAGTCGTACACTTGCAGAC
JMFS109G06+ CAGAGTGGCCACAGGCGAGTACACGCGGGATCGTTGCAACGGAGTCGTACACTTGCAGAC
                      ____________________________________________________________
consensus CAGAGTGGCCACAGGCGAGTACACGCGGGATCGTTGCAACGGAGTCGTACACTTGCAGAC
 
. : . : . : . : . : . :
JMFS041E09+ AGACCGGGCACTCCGGTGGTTCCGGATGCTCCATT
JMFS109G06+ AGACCGGGCACTCCGGTGGTTCCGGATGCTCCATTGCCGGTGAATCAAACTATCATCATA
                      ____________________________________________________________
consensus AGACCGGGCACTCCGGTGGTTCCGGATGCTCCATTGCCGGTGAATCAAACTATCATCATA