Contig 009072:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS014B05Sequence608009072 (8)
JMFS014F07Sequence560009072 (8)
JMFS050F06Sequence578009072 (8)
JMFS102E10Sequence605009072 (8)
JMFS112C12Sequence616009072 (8)ref|XP_006343047.1|6e-48PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Solanum tuberosum]
JMFS119G03Sequence627009072 (8)
JMFS165A02Sequence596009072 (8)
JMFS168G01Sequence616009072 (8)

Alignment

This contig is upended


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JMFS112C12+                 CTGTCAGCTTCCTATTCACAGACTGAAACCTTGAAGCTTCTTTCCTCTGTTTCT
                      ____________________________________________________________
consensus                   CTGTCAGCTTCCTATTCACAGACTGAAACCTTGAAGCTTCTTTCCTCTGTTTCT
 
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JMFS112C12+           CCCTGCATCTTCGATTCTGAAACCAAACTTTGATTTGCCTGGACTCAATGTTGGAGAGGA
                      ____________________________________________________________
consensus             CCCTGCATCTTCGATTCTGAAACCAAACTTTGATTTGCCTGGACTCAATGTTGGAGAGGA
 
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JMFS112C12+           TAGGGCATTCGCGAATGAGCTGCTGACGGCGCATGGAACTGGGTTTAGGGCACTCATGAT
                      ____________________________________________________________
consensus             TAGGGCATTCGCGAATGAGCTGCTGACGGCGCATGGAACTGGGTTTAGGGCACTCATGAT
 
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JMFS112C12+           AAAGCCTCTCGAGGGCGTCAACCTGCTCAGGTGTGTAGCGAACATACTTGCCATTATCCA
                      ____________________________________________________________
consensus             AAAGCCTCTCGAGGGCGTCAACCTGCTCAGGTGTGTAGCGAACATACTTGCCATTATCCA
 
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JMFS112C12+           ATACTGACTTACCATCTTTGCAGGATATCGACATACTGTTTTCTCAAAACCCACCTCACA
JMFS168G01+                                                  TTTCTCAAAACCCACCTCACA
JMFS165A02+                                                                      A
                      ____________________________________________________________
consensus             ATACTGACTTACCATCTTTGCAGGATATCGACATACTGTTTTCTCAAAACCCACCTCACA
 
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JMFS112C12+           ATTACAGAAACCCCAAGAGCCCTTTGCCTCCCTCTGATAAACAATATTTCAAACACCCTT
JMFS168G01+           ATTACAGAAACCCCAAGAGCCCTTGCCTCCCCTCTGATAAACAATATTTCAAACACCCTT
JMFS050F06+                                        CCCTCTGATAAACAATATTTCAAACACCCTT
JMFS165A02+           ATTACAGAAACCCCAAGAGCCCTTTGCCTCCCTCTGATAAACAATATTTCAAACACCCTT
JMFS119G03+                                                   ACAATATTTCAAACACCCTT
                      ____________________________________________________________
consensus             ATTACAGAAACCCCAAGAGCCCTTTGCCTCCCTCTGATAAACAATATTTCAAACACCCTT
 
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JMFS112C12+           GCTTCTTCTTACTGTTTAAAGAAGAAAAAATGATAGTGCCTCTGAATCGAGTTGGCGACT
JMFS168G01+           GCTTCTTCTTACTGTTTAAAGAAGAAAAAATGATAGTGCCTCTGAATCGAGTTGGCGACT
JMFS050F06+           GCTTCTTCTTACTGTTTAAAGAAGAAAAAATGATAGTGCCTCTGAATCGAGTTGGCGACT
JMFS165A02+           GCTTCTTCTTACTGTTTAAAGAAGAAAAAATGATAGTGCCTCTGAATCGAGTTGGCGACT
JMFS119G03+           GCTTCTTCTTACTG-TTAAAGAAGAAAAAATGATAGTGCCTCTGAATCGAGTTGGCGACT
JMFS014B05+                                                      GAATCGAGTTGGCGACT
JMFS102E10+                                                                  CGACT
                      ____________________________________________________________
consensus             GCTTCTTCTTACTGTTTAAAGAAGAAAAAATGATAGTGCCTCTGAATCGAGTTGGCGACT
 
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JMFS112C12+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
JMFS168G01+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
JMFS050F06+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
JMFS165A02+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
JMFS119G03+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
JMFS014F07+                                          GCATAAGATCGAAAGACAAGCAATTCCTG
JMFS014B05+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
JMFS102E10+           TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
                      ____________________________________________________________
consensus             TGATAAAACTAATACTAAAAAGTAATACGGAGCATAAGATCGAAAGACAAGCAATTCCTG
 
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JMFS112C12+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
JMFS168G01+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
JMFS050F06+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
JMFS165A02+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAAAAACATATCTAATCTTTCGATT
JMFS119G03+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
JMFS014F07+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
JMFS014B05+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
JMFS102E10+           AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
                      ____________________________________________________________
consensus             AACGGAAACGGCGCTATCCCCAGCACAAAGCACTAGAGAAACATATCTAATCTTTCGATT
 
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JMFS112C12+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS168G01+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS050F06+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS165A02+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS119G03+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS014F07+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS014B05+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
JMFS102E10+           TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
                      ____________________________________________________________
consensus             TCAGAGCTCCCAAACACCCTTTTGATCACCATTTCCAAAATCATTGCATGCGCGAAATCA
 
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JMFS112C12+           AATTTCTTAAATGGCCTCCACA                                      
JMFS168G01+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
JMFS050F06+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
JMFS165A02+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
JMFS119G03+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
JMFS014F07+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
JMFS014B05+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
JMFS102E10+           AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
                      ____________________________________________________________
consensus             AATTTCTTAAATGGCCTCCACATAAATCTTGAACGGTTAGATCTTGAAACAAAGATTAAA
 
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JMFS168G01+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
JMFS050F06+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
JMFS165A02+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
JMFS119G03+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
JMFS014F07+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
JMFS014B05+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
JMFS102E10+           ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
                      ____________________________________________________________
consensus             ACGTGATATTCACCTAAAGATCGGAGCTTTGAGAGAAACGAGCAAATCCCAGAATTCCCA
 
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JMFS168G01+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
JMFS050F06+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
JMFS165A02+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
JMFS119G03+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
JMFS014F07+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
JMFS014B05+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
JMFS102E10+           TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
                      ____________________________________________________________
consensus             TCTTCAAGGGTTTCACCAACAGTCCAATATTTATACACTCCACATGTCAAGATAGAAAAA
 
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JMFS168G01+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
JMFS050F06+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
JMFS165A02+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
JMFS119G03+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
JMFS014F07+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
JMFS014B05+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
JMFS102E10+           AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
                      ____________________________________________________________
consensus             AAAGAAAAATGAAAGAAATACAGGAGAAGGAGCTGAAAGTTATATTCTGCGATGGCGATC
 
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JMFS168G01+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAA               
JMFS050F06+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACT        
JMFS165A02+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACTGAG     
JMFS119G03+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACTGAGCGTCT
JMFS014F07+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACTGAGCGTCT
JMFS014B05+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACTGAGCGTCT
JMFS102E10+           TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACTGAGCGTCT
                      ____________________________________________________________
consensus             TTGGGCCGATGCAATGAATGATGAATGTTTGTTTAACGGAGAAAAGATAACTGAGCGTCT
 
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JMFS119G03+           GGGGTCAAATAGATAATCATGGATTTTTGAGAAAGATGGGTTTTTGTAGCAGGTGGGGTA
JMFS014F07+           GGGGTCAAATAGATAATCATGGATTTTTGAGAAAGATGGGTTTTTGTAGCAGGTGGGGTA
JMFS014B05+           GGGGTCAAATAGATAATCATGGATTTTTGAGAAAGATGGGTTTTTGTAGCAGGTGGGGTA
JMFS102E10+           GGGGTCAAATAGATAATCATGGATTTTTGAGAAAGATGGGTTTTTGTAGCAGGTGGGGTA
                      ____________________________________________________________
consensus             GGGGTCAAATAGATAATCATGGATTTTTGAGAAAGATGGGTTTTTGTAGCAGGTGGGGTA
 
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JMFS119G03+           GTGTGGAA                                                    
JMFS014F07+           GTGTGGAACGCTGTATTGTTAGTGGCCGGTCAACCTCACTGGTTCAGCTTT         
JMFS014B05+           GTGTGGAACGCTGTATTGTTAGTGGCCGGTCAACCTCACTGGTTCAGCTTT         
JMFS102E10+           GTGTGGAACGCTGTATTGTTAGTGGCCGGTCAACCTCACTGGTTCAGCTTTTTGTAGGGA
                      ____________________________________________________________
consensus             GTGTGGAACGCTGTATTGTTAGTGGCCGGTCAACCTCACTGGTTCAGCTTTTTGTAGGGA