Contig 009060:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF026G08+                                                                   TCA
                      ____________________________________________________________
consensus                                                                      TCA
 
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rJMSF026G08+          GTCATCTCAAGATACTCCGCAGCACAACGAGCCGCAACAACGTNGTAGGGATTAAGAGTC
                      ____________________________________________________________
consensus             GTCATCTCAAGATACTCCGCAGCACAACGAGCCGCAACAACGTNGTAGGGATTAAGAGTC
 
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rJMSF026G08+          ACCGTAATTCCATAGCAGAATTTGGCACATATCTCAAATGTCTTCGGTCCACCGGGAAAA
                      ____________________________________________________________
consensus             ACCGTAATTCCATAGCAGAATTTGGCACATATCTCAAATGTCTTCGGTCCACCGGGAAAA
 
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rJMSF026G08+          TCAACCAGCTGAATTTCGTCAGAACTCTGCTCGCTCTCTCTCGACAGAAGCTTTTGCAAT
                      ____________________________________________________________
consensus             TCAACCAGCTGAATTTCGTCAGAACTCTGCTCGCTCTCTCTCGACAGAAGCTTTTGCAAT
 
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rJMSF026G08+          CGATTGGACTTGGACAAGAGAGGGAACTGCAAAAGTAAAGCGTGACAACTATACTGTNCG
                      ____________________________________________________________
consensus             CGATTGGACTTGGACAAGAGAGGGAACTGCAAAAGTAAAGCGTGACAACTATACTGTNCG
 
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rJMSF026G08+          ANCGATATAANCGATNCAACATNCCACTTCAGAATGAGGTGACCCAAAAAAGAATCAATA
                      ____________________________________________________________
consensus             ANCGATATAANCGATNCAACATNCCACTTCAGAATGAGGTGACCCAAAAAAGAATCAATA
 
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rJMSF026G08+          GTTATACTTATCACCCCCAAAAAAATATGGAGGAAAACCGAGAAATGATTGNCAGAAAAT
                      ____________________________________________________________
consensus             GTTATACTTATCACCCCCAAAAAAATATGGAGGAAAACCGAGAAATGATTGNCAGAAAAT
 
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rJMSF026G08+          TACCTTGTGAAGATAAAATTTCACTTCTCCGACAACAATGGTAACGTCTGTTGNTAATTC
JMFS072E06+                                           CAACAATGGTAACGTCTGTTGCTAATTC
                      ____________________________________________________________
consensus             TACCTTGTGAAGATAAAATTTCACTTCTCCGACAACAATGGTAACGTCTGTTGCTAATTC
 
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rJMSF026G08+          AGATGACACGTACCTAATGAAGTTGCCATCAGATTGGAATGCATCAGGCTTTGACCCCAG
JMFS072E06+           AGATGACACGTACCTAATGAAGTTGCCATCAGATTGGAATGCATCAGGCTTTGACCCCAG
JMFS165F09+                                              GGAATGCATCAGGCTTTGACCCCAG
                      ____________________________________________________________
consensus             AGATGACACGTACCTAATGAAGTTGCCATCAGATTGGAATGCATCAGGCTTTGACCCCAG
 
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rJMSF026G08+          CTTCATAAACTTCATTTTCTTCCAAATTTNCCGACCAAACTCTCATTAAATTATGGCCCA
JMFS072E06+           CTTCATAAACTTCATTTTCTTCCAAATTTACCGACCAAACTCTCACTAAATTATGGCCCA
JMFS165F09+           CTTCATAAACTTCATTTTCTTCCAAATTTACCGACCAAACTCTCACTAAATTATGGCCCA
                      ____________________________________________________________
consensus             CTTCATAAACTTCATTTTCTTCCAAATTTACCGACCAAACTCTCACTAAATTATGGCCCA
 
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rJMSF026G08+          AGATTTACCGCTTCACTTTCAGCAGCACCCAAAACTAACTATTGTATATATATCTCTCTC
JMFS072E06+           AGATTTACCGCTTCACTTTCAGCAGCACCCAAAACTAACTATTGTATATATATCTCTCTC
JMFS165F09+           AGATTTACCGCTTCACTTTCAGCAGCACCCAAAACTAACTATTG--TATATATCTCTCTC
JMFS143G10+                                         AAAACTAACTATTGTATATATATCTCTCTC
JMFS085B03+                                                   ATTGTATATATATCTCTCTC
                      ____________________________________________________________
consensus             AGATTTACCGCTTCACTTTCAGCAGCACCCAAAACTAACTATTGTATATATATCTCTCTC
 
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rJMSF026G08+          TCCTCCTAGGAAGAAGAGCATGAGCAGCGAAGAGGCATATTCACGGACTNCAATACAAGC
JMFS072E06+           TCCTCCTAGGAAGAAGAGCATGAGCAGCGAAGAGGCATATTCA-GGACTCCAATACAAGC
JMFS165F09+           TCCTCCTAGGAAGAAGAGCATGAGCAGCGAAGAGGCATATTCA-GGACTCCAATACAAGC
JMFS143G10+           TCCTC--AGGAAGAAGAGCATGAGCAGCGAAGAGGCATATTCA-GGACTCCAATACAAGC
JMFS085B03+           TCCTCCTAGGAAGAAGAGCATGAGCAGCGAAGAGGCATATTCA-GGACTCCAATACAAGC
                      ____________________________________________________________
consensus             TCCTCCTAGGAAGAAGAGCATGAGCAGCGAAGAGGCATATTCA-GGACTCCAATACAAGC
 
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rJMSF026G08+          AGAAACAAACAAGTCACTAACCCANGAAGAAGAAGAAGCAAGAATAAAGACAATGGCATA
JMFS072E06+           AGAAACAAACAAGTCACTAACCCAAGAAGAAGAAGAAGCAAGAATAAAGACAATGGCATA
JMFS165F09+           AGAAACAAACAAGTCACTAACCCAAGAAGAAGAAGAAGCAAGAATAAAGACAATGGCATA
JMFS143G10+           AGAAACAAACAAGTCACTAACCCAAGAAGAAGAAGAAGCAAGAATAAAGCCAATGGCATA
JMFS085B03+           AGAAACAAACAAGTCACTAACCCAAGAAGAAGAAGAAGCAAGAATAAAGNCAATGGCATA
                      ____________________________________________________________
consensus             AGAAACAAACAAGTCACTAACCCAAGAAGAAGAAGAAGCAAGAATAAAGACAATGGCATA
 
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rJMSF026G08+          ATCT                                                        
JMFS072E06+           ATCTTGTTCTTCCCAACAACCTCGACCCACGAGCCACCACCACATTACAAAAAAAAAAAA
JMSF026G08+                                                            AAAAAAAAAAA
JMFS165F09+           ATCTTGTTCTTCCCAACAACCTCGACCCACGAGCCACCACCACATTAC-AAAAAAAAAAA
JMFS143G10+           ATCTTGTTCTTCCCAACAACCTCGACCCACGAGCCACCACCACATTACAAAAAAAAAAAA
JMFS085B03+           ATCTTGTTCTTCCCAACAACCTCGACCCACGAGCCACCACCACATTAC-AAAAAAAAAAA
                      ____________________________________________________________
consensus             ATCTTGTTCTTCCCAACAACCTCGACCCACGAGCCACCACCACATTACAAAAAAAAAAAA
 
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JMFS072E06+           AAAAAAAGAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
JMSF026G08+           AAAAAAAGAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
JMFS165F09+           AAAAAAAGAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
JMFS143G10+           AAAAAAAGAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
JMFS016G05+                  GAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
JMFS159B10+                  GAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
JMFS085B03+           AAAAAAAGAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
                      ____________________________________________________________
consensus             AAAAAAAGAACTTTTTTCTTCTTGGTTGCTTTTCCGAATCACATTGATGACGAAGATGAC
 
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JMFS072E06+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
JMSF026G08+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
JMFS165F09+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
JMFS143G10+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
JMFS016G05+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
JMFS159B10+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
JMFS085B03+           GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
                      ____________________________________________________________
consensus             GGAATTGGGCTATGATACGACCAACCCACTACGCATAATTGAATGGGGTTATTAAATTGT
 
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JMFS072E06+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
JMSF026G08+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
JMFS165F09+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
JMFS143G10+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
JMFS016G05+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
JMFS159B10+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
JMFS085B03+           TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
                      ____________________________________________________________
consensus             TGAGTAGCCTAGCCGCCTTTGAAATAGTAACCTTCAGAGCTGATGAGAATCATGAGATGA
 
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JMFS072E06+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTC      
JMSF026G08+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTCTTTTTT
JMFS165F09+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTC-TTTTT
JMFS143G10+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTC-TTTTT
JMFS016G05+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTC-TTTTT
JMFS159B10+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTCTTTTTT
JMFS085B03+           TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTC-TTTTT
                      ____________________________________________________________
consensus             TTCTTTGTAAGATGTAATGATCTCTCCTTCGCTCGCAAATCTCAAAGATCTTTC-TTTTT
 
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JMSF026G08+           CT                                                          
JMFS165F09+           TCTTTCTCTCTCTGCGGGTGTAGATACAG                               
JMFS143G10+           TCTTTCTCTCTCTGCGGGTGTAGATACAGGTGAAACATATATGTATGTGTACACGCTCTG
JMFS016G05+           TCTTTCTCTCTCTGCGGGTGTAGATACAGGTGAAACATATATGTATGTGTACACGCTCTG
JMFS159B10+           TCTTTCTCTCTCTGCGGGTGTAGATACAGGTGAAACATATATGTATGTGTACACGCTCTG
JMFS085B03+           TCTTTCTCTCTCTGCGGGTGTAGATACAGGTGAAACATATATGTATGTGTACACGCTCTG
                      ____________________________________________________________
consensus             TCTTTCTCTCTCTGCGGGTGTAGATACAGGTGAAACATATATGTATGTGTACACGCTCTG
 
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JMFS143G10+           AGTGCACTGATGAGGTTGTCGCTCTAGTCTCTGAAACTTTGCAGGTAAAGATGTAATAGG
JMFS016G05+           AGTGCACTGATGAGGTTGTCGCTCTAGTCTCTGAAACTTTGCAGGTAAAGATGTAATAGG
JMFS159B10+           AGTGCACTGATGAGGTTGTCGCTCTAGTCTCTGAAACTTTGCAGGTAAAGATGTAATAGG
JMFS085B03+           AGTGCACTGATGAGGTTGTCGCTCTAGTCTCTGAAACTTTGCAGGTAAAGATGTAATAGG
                      ____________________________________________________________
consensus             AGTGCACTGATGAGGTTGTCGCTCTAGTCTCTGAAACTTTGCAGGTAAAGATGTAATAGG
 
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JMFS143G10+           AGAGAGAAAATGTCAGTAAAGAGAGAGAGAGAGAGGGGAATGGAGTAGTAGGGGACTGTG
JMFS016G05+           AGAGAGAAAATGTCAGTAAAGAGAGAGAGAGAGA                          
JMFS159B10+           AGAGAGAAAACGTCAGTAAAGAGAGAGAGAGAGA                          
JMFS085B03+           AGAGAGAAAATGTCAGTAAAGAGAGAGAGAGAGAGGGGAATGGAGTAGTAGGGGACTGTG
                      ____________________________________________________________
consensus             AGAGAGAAAATGTCAGTAAAGAGAGAGAGAGAGAGGGGAATGGAGTAGTAGGGGACTGTG