Contig 009052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS021B09Sequence613009052 (4)ref|XP_009598286.1|148PREDICTED: uncharacterized protein LOC104094126 [Nicotiana tomentosiformis] ref|
JMFS074F09Sequence617009052 (4)ref|XP_009763312.1|131PREDICTED: serine/threonine-protein kinase GIN4 [Nicotiana sylvestris] ref|XP_00
JMFS140A10Sequence625009052 (4)ref|XP_009768987.1|138PREDICTED: uncharacterized protein LOC104219917 [Nicotiana sylvestris]
JMFS140G03Sequence628009052 (4)ref|XP_009768987.1|138PREDICTED: uncharacterized protein LOC104219917 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS021B09+                                            GCTCCCATACTTCCACTGGAACAGCCT
                      ____________________________________________________________
consensus                                              GCTCCCATACTTCCACTGGAACAGCCT
 
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JMFS021B09+           CGCCTCGTTCCACTCTGCNCCGTACTTTCTCAAGAGGGCAACCCTCCTCTTCTGCATGTC
                      ____________________________________________________________
consensus             CGCCTCGTTCCACTCTGCNCCGTACTTTCTCAAGAGGGCAACCCTCCTCTTCTGCATGTC
 
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JMFS021B09+           CTCGTCGTTGAGCCCCGAGACCTCTGCAGCCGCCTCAATGGCCTCGATCACCACCACGAA
                      ____________________________________________________________
consensus             CTCGTCGTTGAGCCCCGAGACCTCTGCAGCCGCCTCAATGGCCTCGATCACCACCACGAA
 
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JMFS021B09+           GCACGACACCACGTTGTGAATGTGGAACTCAACGCAATCCCTGCTCGAGTGCAGGCTGAT
                      ____________________________________________________________
consensus             GCACGACACCACGTTGTGAATGTGGAACTCAACGCAATCCCTGCTCGAGTGCAGGCTGAT
 
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JMFS021B09+           CGCCTTCCCCATCCAGCTCCTGATGTCTATACAGTTCTTTATATACGATTCGGATTCCTT
JMFS140A10+                                         ACAGTTCTTTATATACGATTCGGATTCCTT
JMFS140G03+                                         ACAGTTCTTTATATACGATTCGGATTCCTT
JMFS074F09+                                                      TACGATTCGGATTCCTT
                      ____________________________________________________________
consensus             CGCCTTCCCCATCCAGCTCCTGATGTCTATACAGTTCTTTATATACGATTCGGATTCCTT
 
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JMFS021B09+           GATGATCCAATGCAGCTCCCTCAGGGGACGCTCGAGTGGCTTCCATTTCGTGCTCCTCTC
JMFS140A10+           GATGATCCAATGCAGCTCCCTCAGGGGACGCTCGAGTGGCTTCCATTTCGTGCTCCTCTC
JMFS140G03+           GATGATCCAATGCAGCTCCCTCAGGGGACGCTCGAGTGGCTTCCATTTCGTGCTCCTCTC
JMFS074F09+           GATGATCCAATGCAGCTCCCTCAGGGGACGCTCGAGTGGCTTCCATTTCGTGCTCCTCTC
                      ____________________________________________________________
consensus             GATGATCCAATGCAGCTCCCTCAGGGGACGCTCGAGTGGCTTCCATTTCGTGCTCCTCTC
 
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JMFS021B09+           GTCCAACCTTAAATTCTGTCTGATCTCGTCACAGATGTTGT--AACGCCTGCACACAAAC
JMFS140A10+           GTCCAACCTTAAATTCTGTCTGATCTCGTCACAGATGTTGTCGAACGCCTGCACACAAAC
JMFS140G03+           GTCCAACCTTAAATTCTGTCTGATCTCGTCACAGATGTTGTCGAACGCCTGCACACAAAC
JMFS074F09+           GTCCAACCTTAAATTCTGTCTGATCTCGTCACAGATGTTGTCGAACGCCTGCACACAAAC
                      ____________________________________________________________
consensus             GTCCAACCTTAAATTCTGTCTGATCTCGTCACAGATGTTGTCGAACGCCTGCACACAAAC
 
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JMFS021B09+           GTCGAATAGGAGACAGCATTGCCTCTGGTTGATTAAAACGTCGTGTTTTAGCACCATTAA
JMFS140A10+           GTCGAATAGGAGACAGCATTGCCTCTGGTTGATTAAAACGTCGTGTTTTAGCACCATTAA
JMFS140G03+           GTCGAATAGGAGACAGCATTGCCTCTGGTTGATTAAAACGTCGTGTTTTAGCACCATTAA
JMFS074F09+           GTCGAATAGGAGACAGCATTGCCTCTGGTTGATTAAAACGTCGTGTTTTAGCACCATTAA
                      ____________________________________________________________
consensus             GTCGAATAGGAGACAGCATTGCCTCTGGTTGATTAAAACGTCGTGTTTTAGCACCATTAA
 
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JMFS021B09+           GGCCTTCATGCTCCCCACAACCTCCCCAATCTGCCGGAATTGATCCATTTTTTTGTTTTC
JMFS140A10+           GGCCTTCATGCTCCCCACAACCTCCCCAATCTGCCGGAATTGATCCATTTTTTTGTTTTC
JMFS140G03+           GGCCTTCATGCTCCCCACAACCTCCCCAATCTGCCGGAATTGATCCATTTTTTTGTTTTC
JMFS074F09+           GGCCTTCATGCTCCCCACAACCTCCCCAATCTGCCGGAATTGATCCATTTTTTTGTTTTC
                      ____________________________________________________________
consensus             GGCCTTCATGCTCCCCACAACCTCCCCAATCTGCCGGAATTGATCCATTTTTTTGTTTTC
 
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JMFS021B09+           TGGG                                                        
JMFS140A10+           TGGGCTTGTAAATAAAAAAGGCTTCAATTCAATATAACAATTTGAAAACAAAGAAAATGC
JMFS140G03+           TGGGCTTGTAAATAAAAAAGGCTTCAATTCAATATAACAATTTGAAAACAAAGAAAATGC
JMFS074F09+           TGGGCTTGTAAATAAAAAAGGCTTCAATTCAATATAACAATTTGAAAACAAAGAAAATGC
                      ____________________________________________________________
consensus             TGGGCTTGTAAATAAAAAAGGCTTCAATTCAATATAACAATTTGAAAACAAAGAAAATGC
 
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JMFS140A10+           TGAATTTCTATCAACCCAATAGAAGCCCAGGAAAAGCCATCAGGGATCAGATGCAGAATT
JMFS140G03+           TGAATTTCTATCAACCCAATAGAAGCCCAGGAAAAGCCATCAGGGATCAGATGCAGAATT
JMFS074F09+           TGAATTTCTATCAACCCAATAGAAGCCCAGGAAAAGCCATCAGGGATCAGATGCAGAATT
                      ____________________________________________________________
consensus             TGAATTTCTATCAACCCAATAGAAGCCCAGGAAAAGCCATCAGGGATCAGATGCAGAATT
 
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JMFS140A10+           GATTCCCCATTATGAATCCTTGTTAATATGATCAAAGGATCTAATAAAAACTGATTGATG
JMFS140G03+           GATTCCCCATTATGAATCCTTGTTAATATGATCAAAGGATCTAATAAAAACTGATTGATG
JMFS074F09+           GATTCCCCATTATGAATCCTTGTTAATATGATCAAAGGATCTAATAAAAACTGATTGATG
                      ____________________________________________________________
consensus             GATTCCCCATTATGAATCCTTGTTAATATGATCAAAGGATCTAATAAAAACTGATTGATG
 
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JMFS140A10+           CAAAAGCTCCAAGAACAGTAAATTATCGCTGGGAAATTGAGTTTGGTTGGTGCAAAAGTT
JMFS140G03+           CAAAAGCTCCAAGAACAGTAAATTATCGCTGGGAAATTGAGTTTGGTTGGTGCAAAAGTT
JMFS074F09+           CAAAAGCTCCAAGAACAGTAAATTATCGCTGGGAAATTGAGTTTGGTTGGTGCAAAAGTT
                      ____________________________________________________________
consensus             CAAAAGCTCCAAGAACAGTAAATTATCGCTGGGAAATTGAGTTTGGTTGGTGCAAAAGTT
 
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JMFS140A10+           GAACAAAACAAAACAAAACAAAAACAAAAACAAAAAATGCAAAAGATTTCTTGTTTCAGA
JMFS140G03+           GAACAAAACAAAACAAAACAAAAACAAAAACAAAAAATGCAAAAGATTTCTTGTTTCAGA
JMFS074F09+           GAACAAAACAAAACAAAACAAAAACAAAAACAAAAAATGCAAAAGATTTCTTGTTTCAGA
                      ____________________________________________________________
consensus             GAACAAAACAAAACAAAACAAAAACAAAAACAAAAAATGCAAAAGATTTCTTGTTTCAGA
 
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JMFS140A10+           AATCTTTGATTTTCTGTTTCTGTTTCTGTTTTTTTTTTTTT                   
JMFS140G03+           AATCTTTGATTTTCTGTTTCTGTTTCTGTTTTTTTTTTTTT                   
JMFS074F09+           AATCTTTGATTTTCTGTTTCTGTTTCTGTTTTTTTTTTTTTTTATTTTTGCTTCTTCTCT
                      ____________________________________________________________
consensus             AATCTTTGATTTTCTGTTTCTGTTTCTGTTTTTTTTTTTTTTTATTTTTGCTTCTTCTCT