Contig 009050:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D11Sequence466009050 (8)ref|XP_009799456.1|1e-32PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]639005337 (4)ref|XP_009599009.1|5e-55PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFF012L10Sequence566009050 (8)ref|XP_009799456.1|1e-94PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]
JMFF016A15Sequence570009050 (8)ref|XP_009799456.1|2e-96PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]636005337 (4)ref|XP_009599009.1|3e-42PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFF037D15Sequence564009050 (8)ref|XP_009799456.1|7e-95PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]626005337 (4)ref|XP_009599009.1|9e-43PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFF039F14Sequence463009050 (8)ref|XP_009799456.1|5e-70PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]660005337 (4)ref|XP_009599009.1|3e-48PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFS020D03Sequence625009050 (8)ref|XP_009799456.1|2e-104PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]
JMFS068B04Sequence642009050 (8)ref|XP_009799456.1|1e-61PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]
JMSF012L09Sequence540009050 (8)ref|XP_009799456.1|2e-87PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS020D03+ GCAGTGACA
                      ____________________________________________________________
consensus GCAGTGACA
 
. : . : . : . : . : . :
JMFS020D03+ CGCTCTCGTTCTTCCTCATTCTCTTCCAACCTATGGTCGACTGTCAACAGGGAAACAACC
                      ____________________________________________________________
consensus CGCTCTCGTTCTTCCTCATTCTCTTCCAACCTATGGTCGACTGTCAACAGGGAAACAACC
 
. : . : . : . : . : . :
JMFS020D03+ CCTCCTTGTGTGTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMFF037D15+ GTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMFF012L10+ GTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMFF016A15+ GTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMSF012L09+ AGATGCAACAGTCACAGTCCAT
                      ____________________________________________________________
consensus CCTCCTTGTGTGTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
 
. : . : . : . : . : . :
JMFS020D03+ TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMFF037D15+ TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMFF012L10+ TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMFF039F14+ GAAACTCT
JMFF016A15+ TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMSF012L09+ TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
                      ____________________________________________________________
consensus TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
 
. : . : . : . : . : . :
JMFS020D03+ ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF037D15+ ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF012L10+ ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF039F14+ ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF016A15+ ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMSF012L09+ ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFS068B04+ CCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
                      ____________________________________________________________
consensus ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
 
. : . : . : . : . : . :
JMFS020D03+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF037D15+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF012L10+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF039F14+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF016A15+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMSF012L09+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFS068B04+ CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
                      ____________________________________________________________
consensus CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
 
. : . : . : . : . : . :
JMFS020D03+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF037D15+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF012L10+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF039F14+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF016A15+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMSF012L09+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF005D11+ CCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFS068B04+ ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
                      ____________________________________________________________
consensus ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
 
. : . : . : . : . : . :
JMFS020D03+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF037D15+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF012L10+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF039F14+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF016A15+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMSF012L09+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF005D11+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFS068B04+ GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
                      ____________________________________________________________
consensus GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
 
. : . : . : . : . : . :
JMFS020D03+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF037D15+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF012L10+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF039F14+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF016A15+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMSF012L09+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF005D11+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFS068B04+ GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
                      ____________________________________________________________
consensus GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
 
. : . : . : . : . : . :
JMFS020D03+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF037D15+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF012L10+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF039F14+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF016A15+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMSF012L09+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF005D11+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFS068B04+ TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
                      ____________________________________________________________
consensus TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
 
. : . : . : . : . : . :
JMFS020D03+ GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFF037D15+ GTAACCTCCGCCTCGCTCATTTCTTCACTC--TGTTCCAACATTTTCCAAATCTTCACTT
JMFF012L10+ GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFF039F14+ GTAACCTCCGCCTCGCTCATTTCTTCACTC--TGTTCCAACATTTTCCAAATCTTCACTT
JMFF016A15+ GTAACCTCCGCCTCGCTCATTTCTTCACTC--TGTTCCAACATTTTCCAAATCTTCACTT
JMSF012L09+ GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFF005D11+ GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFS068B04+ GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
                      ____________________________________________________________
consensus GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
 
. : . : . : . : . : . :
JMFS020D03+ CAACCAATGAAGACAA
JMFF037D15+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCT
JMFF012L10+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGA
JMFF039F14+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGA
JMFF016A15+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCT
JMSF012L09+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCT
JMFF005D11+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCTAAGCATTGTACAGAAGGGAAGCA
JMFS068B04+ CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCTAAGCATTGTACAGAAGGGAAGCA
                      ____________________________________________________________
consensus CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCTAAGCATTGTACAGAAGGGAAGCA
 
. : . : . : . : . : . :
JMFF005D11+ TATAGATATAGGAGTGTATGTATAGGAGAGTGGGGGGATTTGGTTCAGGTGTGAGCTGGA
JMFS068B04+ TATAGATATAGGAGTGTATGTATAGGAGAGTGGGGGGATTTGGTTCAGGTGTGAGCTGGA
                      ____________________________________________________________
consensus TATAGATATAGGAGTGTATGTATAGGAGAGTGGGGGGATTTGGTTCAGGTGTGAGCTGGA
 
. : . : . : . : . : . :
JMFF005D11+ ATGGATCGGAATGTTGACAGTGAAACCCTAGAGAGATAAAGACTGGGAGAGAGATATCTG
JMFS068B04+ ATGGATCGGAATGTTGACAGTGAAACCCTAGAGAGATAAAGACTGGGAGAGAGATATCTG
                      ____________________________________________________________
consensus ATGGATCGGAATGTTGACAGTGAAACCCTAGAGAGATAAAGACTGGGAGAGAGATATCTG
 
. : . : . : . : . : . :
JMFF005D11+ TCGTTTGATT
JMFS068B04+ TCGTTTGATTGGATGAAAATAAAAGAAATGAAATTTCTAGAGAGAGAAAAACAAGGGTGG
                      ____________________________________________________________
consensus TCGTTTGATTGGATGAAAATAAAAGAAATGAAATTTCTAGAGAGAGAAAAACAAGGGTGG