| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS053H09 | Sequence | 238 | 009034 (10) | ||||||||
| JMSF002B01 | Sequence | 324 | 007570 (16) | 732 | 009034 (10) | ref|XP_009787302.1| | 1e-66 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF011E16 | Sequence | 214 | 007570 (16) | 711 | 009034 (10) | ref|XP_009787302.1| | 2e-67 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF012J05 | Sequence | 566 | 021002 | ref|XP_011081602.1| | 6e-104 | PREDICTED: F-box/LRR-repeat protein 15-like [Sesamum indicum] | 752 | 009034 (10) | ref|XP_009787302.1| | 1e-72 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] |
| JMSF013O17 | Sequence | 302 | 007570 (16) | 705 | 009034 (10) | ref|XP_009787302.1| | 9e-62 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF022N04 | Sequence | 455 | 007570 (16) | 754 | 009034 (10) | ref|XP_009787302.1| | 9e-63 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF035D22 | Sequence | 677 | 007570 (16) | 726 | 009034 (10) | ref|XP_009787302.1| | 1e-60 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF037F08 | Sequence | 645 | 007570 (16) | 733 | 009034 (10) | ref|XP_009787302.1| | 1e-62 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF037M18 | Sequence | 644 | 007570 (16) | 663 | 009034 (10) | ref|XP_009787302.1| | 9e-47 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
| JMSF051D18 | Sequence | 685 | 007570 (16) | 738 | 009034 (10) | ref|XP_009787302.1| | 9e-68 | PREDICTED: F-box/LRR-repeat protein 15 [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF012J05+ TAGTGAATTGGACTTGT
____________________________________________________________
consensus TAGTGAATTGGACTTGT
. : . : . : . : . : . :
rJMSF011E16+ GGGACACTGNGCCAGTCTGCCATTGAGGAATTGCTTGCTTGCTGTAAACATTTGA
rJMSF013O17+ GGAATTGCTTGCTTGCTGTAAACATTTGA
rJMSF051D18+ GGGACACTGTGCCAGTCTGCCATTGAGGAATTGCTTGCTTGCTGTAAACATTTGA
rJMSF002B01+ GGGACACTGNGCCAGTCTGCCATTGAGGAANTGCTTGCCTGCTGTAAACATTTGA
rJMSF012J05+ CATACGGGACACTGTGCCAGTCTGCCATTGAGGAATTGCTTGCTTGCTGTAAACATTTGA
rJMSF037F08+ TGAGGAATTGCTTGCTTGCTGTAAACATTTGA
rJMSF022N04+ TGAGGAATTGCTTGCTTGCTGTAAACATTTGA
rJMSF035D22+ TGCTGTAAACATTTGA
____________________________________________________________
consensus CATACGGGACACTGTGCCAGTCTGCCATTGAGGAATTGCTTGCTTGCTGTAAACATTTGA
. : . : . : . : . : . :
rJMSF011E16+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
rJMSF013O17+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
rJMSF051D18+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
rJMSF002B01+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGNGGAAATGAAA
rJMSF012J05+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
rJMSF037F08+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
rJMSF022N04+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
rJMSF037M18+ TTGGATTGGGGTGGAAATGAAA
rJMSF035D22+ CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
____________________________________________________________
consensus CCCATGTTAGCTTGAATGGGTGCATAAATATGCACGATTTGGATTGGGGTGGAAATGAAA
. : . : . : . : . : . :
rJMSF011E16+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
rJMSF013O17+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAGTGAGC
rJMSF051D18+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAGTGAGC
rJMSF002B01+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
rJMSF012J05+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
rJMSF037F08+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
rJMSF022N04+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
rJMSF037M18+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
rJMSF035D22+ TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
____________________________________________________________
consensus TTTCTTACATGACGTCAACATTTCCATCCACCCTTGGTGACATCCACTTCCCAAATGAGC
. : . : . : . : . : . :
rJMSF011E16+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF013O17+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF051D18+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF002B01+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF012J05+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF037F08+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF022N04+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF037M18+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
rJMSF035D22+ AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
____________________________________________________________
consensus AACCAAATCGTATGTTGCAGAATCTCACTTGTGTTGGTTGTCCCAACATAAAAAAGGTTG
. : . : . : . : . : . :
rJMSF011E16+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF013O17+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF051D18+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF002B01+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF012J05+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF037F08+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF022N04+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF037M18+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
rJMSF035D22+ TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
____________________________________________________________
consensus TTATTCCCATGGCACAGTGTTTCCTTTTGTCATCACTAAATCTGTCGCTGTCTGCAAATC
. : . : . : . : . : . :
rJMSF011E16+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF013O17+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF051D18+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF002B01+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF012J05+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF037F08+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF022N04+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF037M18+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
rJMSF035D22+ TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
____________________________________________________________
consensus TGAAGGAAGTTAACGTTGCTTGTTCCAACTTGTCTTCTCTTAATTTAAGCAACTGTTGTG
. : . : . : . : . : . :
rJMSF011E16+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF013O17+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF051D18+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF002B01+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF012J05+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF037F08+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF022N04+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF037M18+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
rJMSF035D22+ CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
____________________________________________________________
consensus CTCTGGAAATCTTGAAACTCGACTGTCCTAGATTAAACAACCTATTCCTCCAGTCTTGCA
. : . : . : . : . : . :
rJMSF011E16+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF013O17+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF051D18+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF002B01+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF012J05+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF037F08+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF022N04+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF037M18+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
rJMSF035D22+ ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
____________________________________________________________
consensus ACATTGACGAGGAAGCTGTTGAAGCTGCCATATCGCGGTGCAGTGTGCTGGAGACACTCG
. : . : . : . : . : . :
rJMSF011E16+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF013O17+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF051D18+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF002B01+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF012J05+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF037F08+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF022N04+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF037M18+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
rJMSF035D22+ ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
____________________________________________________________
consensus ATGTCCGTTTTTGTCCCAAGATATGCCCACTGAGTATAGGGACGTTACGAGCTGCATGTC
. : . : . : . : . : . :
rJMSF011E16+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF013O17+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF051D18+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF002B01+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF012J05+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF037F08+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF022N04+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF037M18+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
rJMSF035D22+ CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
JMFS053H09+ GGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
____________________________________________________________
consensus CCGGCCTGAAACGCATCTTCAGCAGCCTAGCACCTGCATGATGGGATGAGATGTGAAGTG
. : . : . : . : . : . :
rJMSF011E16+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTNTAGTAA
rJMSF013O17+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF051D18+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF002B01+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF012J05+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF037F08+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF022N04+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF037M18+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
rJMSF035D22+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
JMFS053H09+ CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
____________________________________________________________
consensus CTGTGTTGCATTTGTTGGGTATATTGGTAGTAACTGGTACTGAATTTCTTGTTTTAGTAA
. : . : . : . : . : . :
rJMSF011E16+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGAT
rJMSF013O17+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACC
rJMSF051D18+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTAGC
rJMSF002B01+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTAGC
rJMSF012J05+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACT
rJMSF037F08+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTAC
rJMSF022N04+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACT
rJMSF037M18+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACT
rJMSF035D22+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACT
JMFS053H09+ TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACT
____________________________________________________________
consensus TCTTTTTTTAATTTTTTTCTTTTATACTTTGTGGTTGTTGAGTGAACCAAGAGATTTACT
. : . : . : . : . : . :
rJMSF013O17+ TTGA
rJMSF051D18+ TTGA
rJMSF002B01+ TTGA
rJMSF012J05+ TGAGGTGTCTGCTAT
rJMSF022N04+ TGAGGTGTCTGCTATCAGGGATGAAACT
rJMSF037M18+ TGAGGTGTCTGCTATCAGGGATGAAACT
rJMSF035D22+ TGAGGTGTCTGCTATCAGGGATGAAACT
JMFS053H09+ TGAGGTGTCTGCTATCAGGGATGAAACTTACTCATTATTATTCATGCTTCTTAATAATTC
____________________________________________________________
consensus TGAGGTGTCTGCTATCAGGGATGAAACTTACTCATTATTATTCATGCTTCTTAATAATTC