Contig 009001:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019H05Sequence636009001 (2)
JMSF032L06Sequence635009001 (2)ref|XP_009793623.1|189PREDICTED: uncharacterized protein LOC104240476 [Nicotiana sylvestris]553017194ref|XP_009599725.1|190PREDICTED: uncharacterized protein LOC104095329 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032L06+ CTTCACATTAGAAGATAGTGAAGAAGATCGCCTCAAT
                      ____________________________________________________________
consensus CTTCACATTAGAAGATAGTGAAGAAGATCGCCTCAAT
 
. : . : . : . : . : . :
JMSF032L06+ AGGCCCGTTATCTCCTCTATTGCGCCACTTTCTGCCACGGAATCCCGGTATACATTCACC
                      ____________________________________________________________
consensus AGGCCCGTTATCTCCTCTATTGCGCCACTTTCTGCCACGGAATCCCGGTATACATTCACC
 
. : . : . : . : . : . :
JMSF032L06+ GATGACACCACTCTCAAAAGGCCAGCAGCTGCTTCACGTGCAGAATCAGAATCCGACTTC
                      ____________________________________________________________
consensus GATGACACCACTCTCAAAAGGCCAGCAGCTGCTTCACGTGCAGAATCAGAATCCGACTTC
 
. : . : . : . : . : . :
JMSF032L06+ AGAAGATTCACAGTGAGATTGACTGAGCCAGGAAACTGCATTATGGTATCTACGCACTTC
                      ____________________________________________________________
consensus AGAAGATTCACAGTGAGATTGACTGAGCCAGGAAACTGCATTATGGTATCTACGCACTTC
 
. : . : . : . : . : . :
JMSF032L06+ TTTCCCCCGAGTGAATACTTCCATAGGGTATCTATTGCCTCTCGTCTATCACGAGGATCG
                      ____________________________________________________________
consensus TTTCCCCCGAGTGAATACTTCCATAGGGTATCTATTGCCTCTCGTCTATCACGAGGATCG
 
. : . : . : . : . : . :
JMSF032L06+ TTGTCTAAACCCAGCATTCGGACGAACAATGCCACATAACCATCACCGATAGTAGACATG
                      ____________________________________________________________
consensus TTGTCTAAACCCAGCATTCGGACGAACAATGCCACATAACCATCACCGATAGTAGACATG
 
. : . : . : . : . : . :
JMSF032L06+ CTGTCCCCTGTGGTATCAACATCAGGAGAAGCAGGCTCCTGGGTGGTGGCAGAAACATCA
                      ____________________________________________________________
consensus CTGTCCCCTGTGGTATCAACATCAGGAGAAGCAGGCTCCTGGGTGGTGGCAGAAACATCA
 
. : . : . : . : . : . :
JMSF032L06+ GTCTCTCCATCACTGCAGTGAAGTTTGAAGGAAGAGAGGGTACGAGGGGTGAGTTTTGTT
JMFS019H05+ TTTGTT
                      ____________________________________________________________
consensus GTCTCTCCATCACTGCAGTGAAGTTTGAAGGAAGAGAGGGTACGAGGGGTGAGTTTTGTT
 
. : . : . : . : . : . :
JMSF032L06+ GTTCTAACTGTAAAAACGGCCAGATGGGTTGGCAAGATTGAACGTTTTGGGTGATTGGGA
JMFS019H05+ GTTCTAACTGTAAAAACGGCCAGATGGGTTGGCAAGATTGAACGTTTTGGGTGATTGGGA
                      ____________________________________________________________
consensus GTTCTAACTGTAAAAACGGCCAGATGGGTTGGCAAGATTGAACGTTTTGGGTGATTGGGA
 
. : . : . : . : . : . :
JMSF032L06+ GGCCTGAATTTGAGATGGGTAGGGAGCGTTAGGGCCATATCCGTTTAAGTGAAGCGTTTA
JMFS019H05+ GGCCTGAATTTGAGATGGGTAGGGAGCGTTAGGGCCATATCCGTTTAAGTGAAGCGTTTA
                      ____________________________________________________________
consensus GGCCTGAATTTGAGATGGGTAGGGAGCGTTAGGGCCATATCCGTTTAAGTGAAGCGTTTA
 
. : . : . : . : . : . :
JMSF032L06+ TGCCATAAATAATACTCCGTATTGAACAGCCTCGGCCTGTATAGGGGTTTGGATTC
JMFS019H05+ TGCCATAAATAATACTCCGTATTGAACAGCCTCGGCCTGTATAGGGGTTTGGATTCTGGG
                      ____________________________________________________________
consensus TGCCATAAATAATACTCCGTATTGAACAGCCTCGGCCTGTATAGGGGTTTGGATTCTGGG
 
. : . : . : . : . : . :
JMFS019H05+ TTTGTTGAGGTGATGCTGTGATAGCTTTGTTGGGTATGCAAGAAACGACATTGGTGGAAT
                      ____________________________________________________________
consensus TTTGTTGAGGTGATGCTGTGATAGCTTTGTTGGGTATGCAAGAAACGACATTGGTGGAAT
 
. : . : . : . : . : . :
JMFS019H05+ CTCCTAGAAAATCAATATCTAATTAATAAACCATAATCCAATTTTTCTGCAAATAATTTT
                      ____________________________________________________________
consensus CTCCTAGAAAATCAATATCTAATTAATAAACCATAATCCAATTTTTCTGCAAATAATTTT
 
. : . : . : . : . : . :
JMFS019H05+ GAATACATATATATAGGTCAAATGAACATTTTGCCCAGAATAAAGAACTGGAGTCTAGAG
                      ____________________________________________________________
consensus GAATACATATATATAGGTCAAATGAACATTTTGCCCAGAATAAAGAACTGGAGTCTAGAG
 
. : . : . : . : . : . :
JMFS019H05+ GAATTGATTGAGAAGGGATCAAACATCATGAATGAAATCATCAATCAATATAGTACGTGT
                      ____________________________________________________________
consensus GAATTGATTGAGAAGGGATCAAACATCATGAATGAAATCATCAATCAATATAGTACGTGT
 
. : . : . : . : . : . :
JMFS019H05+ CCATACATACTTTTTTTAATCTATGAAAACACAAAAAATCACTATCCTATTAAAGTTTGA
                      ____________________________________________________________
consensus CCATACATACTTTTTTTAATCTATGAAAACACAAAAAATCACTATCCTATTAAAGTTTGA
 
. : . : . : . : . : . :
JMFS019H05+ ACCTACAACCTCTAATTTAAAAAAGTCACATCAAATATGATAAAAATAATAGTTAAAAAA
                      ____________________________________________________________
consensus ACCTACAACCTCTAATTTAAAAAAGTCACATCAAATATGATAAAAATAATAGTTAAAAAA
 
. : . : . : . : . : . :
JMFS019H05+ AAAAACTATTATTTATATAATTTTCAAATGACTAACAAGTAAGAAGTAACAATTCTCAAC
                      ____________________________________________________________
consensus AAAAACTATTATTTATATAATTTTCAAATGACTAACAAGTAAGAAGTAACAATTCTCAAC