Contig 008957:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN034N03Sequence476008957 (2)ref|XP_006360825.1|3e-39PREDICTED: patellin-6-like [Solanum tuberosum]
JMSF018B05Sequence320023173ref|XP_011032599.1|2e-12PREDICTED: patellin-6 [Populus euphratica]783008957 (2)gb|ADZ24716.1|6e-169Sec14-like protein [Solanum pennellii]

Alignment

This contig is upended


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rJMSF018B05+                              GTNTTCAAAGACAGGGAAATGTACGAGAGNATCTTCGGAG
                      ____________________________________________________________
consensus                                 GTNTTCAAAGACAGGGAAATGTACGAGAGNATCTTCGGAG
 
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rJMSF018B05+          ACGACGAGAAGCTCCAGAGATTCCTGCGGTGGAGAGTCCAGGTTCTCGAGCGAGGGATTA
                      ____________________________________________________________
consensus             ACGACGAGAAGCTCCAGAGATTCCTGCGGTGGAGAGTCCAGGTTCTCGAGCGAGGGATTA
 
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rJMSF018B05+          AGCTCCTCCATTTCAAACCCGGCGGCGTAAACTCCATCATCCAAGTCACCGATCTCAAAG
                      ____________________________________________________________
consensus             AGCTCCTCCATTTCAAACCCGGCGGCGTAAACTCCATCATCCAAGTCACCGATCTCAAAG
 
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rJMSF018B05+          ACATGCCCAAACGAGAACTCCGAGCCGCCTCTAACCACATCCTCTCTCTTTTCCAGGACA
                      ____________________________________________________________
consensus             ACATGCCCAAACGAGAACTCCGAGCCGCCTCTAACCACATCCTCTCTCTTTTCCAGGACA
 
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rJMSF018B05+          ATTACCCAGAAATGGTCGCCCGCAAGATTTTCATCAACGTTCCATGGTACTTCAGTGTGC
                      ____________________________________________________________
consensus             ATTACCCAGAAATGGTCGCCCGCAAGATTTTCATCAACGTTCCATGGTACTTCAGTGTGC
 
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rJMSF018B05+          TTTACTCAATGTTCAGCCCATTCCTGACCCAAAGAACAAAGAGCAAATTCGTGATCTCCA
                      ____________________________________________________________
consensus             TTTACTCAATGTTCAGCCCATTCCTGACCCAAAGAACAAAGAGCAAATTCGTGATCTCCA
 
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rJMSF018B05+          AGGAAGGCAATGTTGCCGAGACATTATACAAGTTCATCAGGCCGGAATATGTTCCGGTCC
                      ____________________________________________________________
consensus             AGGAAGGCAATGTTGCCGAGACATTATACAAGTTCATCAGGCCGGAATATGTTCCGGTCC
 
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rJMSF018B05+          AGTACGGCGGTCTGAGTCGACCCAGCGATTTGCACAACGGGCCTCCTAAACCCGCCTCCG
                      ____________________________________________________________
consensus             AGTACGGCGGTCTGAGTCGACCCAGCGATTTGCACAACGGGCCTCCTAAACCCGCCTCCG
 
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rJMSF018B05+          AGTTCACTGTCAAAGGAGGGGAAAAAGTCAACATCCAGATTGAAGGCATTGAGGGCGGCG
                      ____________________________________________________________
consensus             AGTTCACTGTCAAAGGAGGGGAAAAAGTCAACATCCAGATTGAAGGCATTGAGGGCGGCG
 
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rJMSF018B05+          CGACAATAACATGGGACATAGTGGTCGGAGGATGGGAGTTGGAGTACAGTGTGGAGTTTG
JMFN034N03-               AATAACATGGGACATAGTGGTCGGAGGATGGGAGTTGGAGTACAGTGTGGAGTTTG
                      ____________________________________________________________
consensus             CGACAATAACATGGGACATAGTGGTCGGAGGATGGGAGTTGGAGTACAGTGTGGAGTTTG
 
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rJMSF018B05+          TACCCAACGCCGAGAGCAGCTATACCATCGCCGTGGAGAAGCCGCGGAGGATTGCCGCCG
JMFN034N03-           TACCCAACGCCGAGAGCAGCTATACCATCGCCGTGGAGAAGCCGCGGAGGATTGCCGCCG
                      ____________________________________________________________
consensus             TACCCAACGCCGAGAGCAGCTATACCATCGCCGTGGAGAAGCCGCGGAGGATTGCCGCCG
 
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rJMSF018B05+          GGGAAGAGGCCGTTCACAACTCTTTCAAGTCGCCGGAGGCCGGGAAACTGGTGCTATCCG
JMFN034N03-           GGGAAGAGGCCGTTCACAACTCTTTCAAGTCGCCGGAGGCCGGGAAACTGGTGCTATCCG
                      ____________________________________________________________
consensus             GGGAAGAGGCCGTTCACAACTCTTTCAAGTCGCCGGAGGCCGGGAAACTGGTGCTATCCG
 
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rJMSF018B05+          TCGACAACACGGCTTCCCGGAAGAGAAAAGTGGCGGCTTATCGATACCTAGTCCGCAAAT
JMFN034N03-           TCGACAACACGGCTTCCCGGAAGAGAAAAGTGGCGGCTTATCGATACCTAGTCCGCAAAT
                      ____________________________________________________________
consensus             TCGACAACACGGCTTCCCGGAAGAGAAAAGTGGCGGCTTATCGATACCTAGTCCGCAAAT
 
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rJMSF018B05+          CGTCGACCATCTAATAATGCTTT                                     
JMFN034N03-           CGTCGACCATCTAATAATGCTTTTTTACAAATAGTAATAAAGAATCTTTTGTGTTGCTTT
                      ____________________________________________________________
consensus             CGTCGACCATCTAATAATGCTTTTTTACAAATAGTAATAAAGAATCTTTTGTGTTGCTTT
 
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JMFN034N03-           TAGTTGGCCACGCTAATCTCTTTTCTTTTTTTCTTTAATCATTCCTTTGAGGGGCTTAAT
                      ____________________________________________________________
consensus             TAGTTGGCCACGCTAATCTCTTTTCTTTTTTTCTTTAATCATTCCTTTGAGGGGCTTAAT
 
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JMFN034N03-           TACCTTTCTAATGCTTGGTAACTTTGAATTATATGTACTTGGTGGGTGTACTTACTACTT
                      ____________________________________________________________
consensus             TACCTTTCTAATGCTTGGTAACTTTGAATTATATGTACTTGGTGGGTGTACTTACTACTT
 
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JMFN034N03-           ACTACTAGCTTAGTGGTATGAATATATATATATATATAAATGGTGTTATTATATTTTCTT
                      ____________________________________________________________
consensus             ACTACTAGCTTAGTGGTATGAATATATATATATATATAAATGGTGTTATTATATTTTCTT