Contig 008952:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030H17Sequence163008952 (3)
JMFN032N17Sequence617008952 (3)
JMFN034P08Sequence626008952 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN034P08+ ATTATTGAACATATATAATCATCCCAGCACTAGAGTTATGTCAAC
                      ____________________________________________________________
consensus ATTATTGAACATATATAATCATCCCAGCACTAGAGTTATGTCAAC
 
. : . : . : . : . : . :
JMFN034P08+ CCGCAAAAACAACATACTAAATTGGGTACATGTCATACATAGGCAATATAATGCTCCAAT
JMFN032N17+ GCAATATAATGCTCCAAT
                      ____________________________________________________________
consensus CCGCAAAAACAACATACTAAATTGGGTACATGTCATACATAGGCAATATAATGCTCCAAT
 
. : . : . : . : . : . :
JMFN034P08+ ATAATACCATACTTGTCTGATACAACCTAACAATATTATTCTTGTATTAAGTTGTAGCGC
JMFN032N17+ ATAATACTATACTTGTCTGATACAACCTAACAATATTATTCTTGTATTAAGTTGTAGCGC
                      ____________________________________________________________
consensus ATAATACTATACTTGTCTGATACAACCTAACAATATTATTCTTGTATTAAGTTGTAGCGC
 
. : . : . : . : . : . :
JMFN034P08+ ACATAGGGATTACAACATAATAAATTTGATATGGATGGATGGATGGATGATGACGACTAA
JMFN032N17+ ACATAGGGATTACAACATAATAAATTTGATATGGATGGATGGATGGATGATGACGACTAA
                      ____________________________________________________________
consensus ACATAGGGATTACAACATAATAAATTTGATATGGATGGATGGATGGATGATGACGACTAA
 
. : . : . : . : . : . :
JMFN034P08+ CCGCAATATTTAGTCGATGAATCCACTGTTAAAAAGCAGTACAGTAGCACCCAACAACAA
JMFN032N17+ CCGCAATATTTAGTCGATGAATCCACTGTTAAAAAGCAGTACAGTAGCACCCAACAACAA
                      ____________________________________________________________
consensus CCGCAATATTTAGTCGATGAATCCACTGTTAAAAAGCAGTACAGTAGCACCCAACAACAA
 
. : . : . : . : . : . :
JMFN034P08+ CAACAACAGCAGTTAAACTACCATACAAGCTGCAGACTTGGAGGACAGTTGCGCGCGCTG
JMFN032N17+ CAACAACAGCAGTTAAACTACCATACAAGCTGCAGACTTGGAGGACAGTTGCGCGCGCTG
                      ____________________________________________________________
consensus CAACAACAGCAGTTAAACTACCATACAAGCTGCAGACTTGGAGGACAGTTGCGCGCGCTG
 
. : . : . : . : . : . :
JMFN034P08+ ATCAAAGAATCGAACATGAACAGCAGCCATCTGGCTCGTGACGGTGGTGGTGGACGACGG
JMFN032N17+ ATCAAAGAATCGAACATGAACAGCAGCCATCTGGCTCGTGACGGTGGTGGTGGACGACGG
                      ____________________________________________________________
consensus ATCAAAGAATCGAACATGAACAGCAGCCATCTGGCTCGTGACGGTGGTGGTGGACGACGG
 
. : . : . : . : . : . :
JMFN034P08+ CAGGAGGCGGCGGCGGCGGTGGATGGAAGTAATCCTGATAGCCGTGGGGATGGTGCGGTG
JMFN032N17+ CAGGAGGCGGCGGCGGCGGTGGATGGAAGTAATCCTGATAGCCGTGGGGATGGTGCGGTG
                      ____________________________________________________________
consensus CAGGAGGCGGCGGCGGCGGTGGATGGAAGTAATCCTGATAGCCGTGGGGATGGTGCGGTG
 
. : . : . : . : . : . :
JMFN034P08+ GCGGCGGAGGAGGGTGGTGTACGTGCGGCGGCGGCGGCGGATGGTGGTGTACGTGTGGCG
JMFN030H17+ GGCG
JMFN032N17+ GCGGCGGAGGAGGGTGGTGTACGTGCGGCGGCGGCGGCGGATGGTGGTGTACGTGTGGCG
                      ____________________________________________________________
consensus GCGGCGGAGGAGGGTGGTGTACGTGCGGCGGCGGCGGCGGATGGTGGTGTACGTGTGGCG
 
. : . : . : . : . : . :
JMFN034P08+ GCGGCGGAGGGTGGTGTGGGTGTACGTGTGGCGGCGGCGGAGGGTGGTGTGGGTGTGGGT
JMFN030H17+ GCGGCGGAGGGTGGTGTGGGTGTACGTGTGGCGGCGGCGGAGGGTGGTGTGGGTGTGGGT
JMFN032N17+ GCGGCGGAGGGTGGTGTGGGTGTACGTGTGGCGGCGGCGGAGGGTGGTGTGGGTGTGGGT
                      ____________________________________________________________
consensus GCGGCGGAGGGTGGTGTGGGTGTACGTGTGGCGGCGGCGGAGGGTGGTGTGGGTGTGGGT
 
. : . : . : . : . : . :
JMFN034P08+ GTGGTGGCGGAGGAGGAGGA-GCGTGATGGTGGTGGTGGTGG
JMFN030H17+ GTGGTGGCGGAGGAGGAGGACGCGTGATGGTGGTGGTGGTGGTGACTCATGGAGCTTGG
JMFN032N17+ GTGGTGGCGGAGGAGGAGGA-GCGTGATGGTGGTGGTGGTGGTGACTCATGGAGCTTGGT
                      ____________________________________________________________
consensus GTGGTGGCGGAGGAGGAGGA-GCGTGATGGTGGTGGTGGTGGTGACTCATGGAGCTTGGT
 
. : . : . : . : . : . :
JMFN032N17+ GTTGCGGTGAGGTGAACAAAGAAGAGTGGGGTTTGAAGAAAACGATGAAGCAAGAAAGAG
                      ____________________________________________________________
consensus GTTGCGGTGAGGTGAACAAAGAAGAGTGGGGTTTGAAGAAAACGATGAAGCAAGAAAGAG