Contig 008946:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I18Sequence156002028 (4)734008946 (4)ref|XP_002521706.1|2e-70plant ubiquilin, putative [Ricinus communis] gb|EEF40693.1| plant ubiquilin, put
JMFN025C14Sequence616008946 (4)
JMFN035L11Sequence574008946 (4)ref|XP_002521706.1|3e-30plant ubiquilin, putative [Ricinus communis] gb|EEF40693.1| plant ubiquilin, put
JMFS135C02Sequence617008946 (4)ref|XP_006343334.1|2e-51PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN035L11+ AAGAGATAGTAAGAAGCATTAATATTCAGAATGAACTTTCATGTTCAGAAAGTCG
rJMFF001I18- TGTTCAGAAAGTCG
                      ____________________________________________________________
consensus AAGAGATAGTAAGAAGCATTAATATTCAGAATGAACTTTCATGTTCAGAAAGTCG
 
. : . : . : . : . : . :
JMFN035L11+ CACAAGAACAAATAGGTGAAGGAAGAAAAACTTAACATCATCGCATGTACAAGGAATTCA
rJMFF001I18- CACAAGAACAAATAGGTGAAGGAAGAAAAACTTAACATCATCGCATGTACAAGGAATTCA
                      ____________________________________________________________
consensus CACAAGAACAAATAGGTGAAGGAAGAAAAACTTAACATCATCGCATGTACAAGGAATTCA
 
. : . : . : . : . : . :
JMFN035L11+ AGAACTTTGGTTCCACCATAATTTTACTTGAGGTCTATAGAAATGGGAATGGGGGACGAC
rJMFF001I18- AGAACTTTGGTTCCACCATAATTTTACTTGAGGTCTATAGAAATGGGAATGGGGGACGAC
                      ____________________________________________________________
consensus AGAACTTTGGTTCCACCATAATTTTACTTGAGGTCTATAGAAATGGGAATGGGGGACGAC
 
. : . : . : . : . : . :
JMFN035L11+ GACGGGGCTCAAGGGTTCCAAAAATCACTATTTTTTAAATTTTTTTTATTTTTAAACTAA
rJMFF001I18- GACGGGGCTCAAGGGTTCCAAAAATCACTATTTTTTAAATTTTTTTTATTTTTAAACTAA
                      ____________________________________________________________
consensus GACGGGGCTCAAGGGTTCCAAAAATCACTATTTTTTAAATTTTTTTTATTTTTAAACTAA
 
. : . : . : . : . : . :
JMFN035L11+ GATTTCATATGCGTTGTGTCCAATCCCCAACAGAAGGTATATATTGTCGCACTGAACAGA
rJMFF001I18- GATTTCATATGCGTTGTGTCCAATCCCCAACAGAAGGTATATATTGTCGCACTGAACAGA
                      ____________________________________________________________
consensus GATTTCATATGCGTTGTGTCCAATCCCCAACAGAAGGTATATATTGTCGCACTGAACAGA
 
. : . : . : . : . : . :
JMFN035L11+ ATATACCAACACAGCCGAGCCTATTGACCAGGGTTTCCTAGAAGACGCTCCACTGCAGCA
rJMFF001I18- ATATACCAACACAGCCGAGCCTATTGACCAGGGTTTCCTAGAAGACGCTCCACTGCAGCA
                      ____________________________________________________________
consensus ATATACCAACACAGCCGAGCCTATTGACCAGGGTTTCCTAGAAGACGCTCCACTGCAGCA
 
. : . : . : . : . : . :
JMFN035L11+ TGAACATTCCCTGCAGTAGCTATCAGAGCCCTTATGTTTTCTTGAGTATCAAAGAACCCC
rJMFF001I18- TGAACATTCCCTGCAGTAGCTATCAGAGCCCTTATGTTTTCTTGAGTATCAAAGAACCCC
                      ____________________________________________________________
consensus TGAACATTCCCTGCAGTAGCTATCAGAGCCCTTATGTTTTCTTGAGTATCAAAGAACCCC
 
. : . : . : . : . : . :
JMFN035L11+ ATTTCTTGTAGTTGTGCTAGCTGAGAGGCATACAATTCCTCAGGTGGAACATTAGGTCTG
rJMFF001I18- ATTTCTTGTAGTTGTGCTAGCTGAGAGGCATACAATTCCTCAGGTGGAACATTAGGTCTG
                      ____________________________________________________________
consensus ATTTCTTGTAGTTGTGCTAGCTGAGAGGCATACAATTCCTCAGGTGGAACATTAGGTCTG
 
. : . : . : . : . : . :
JMFN035L11+ TTGGGTACACCCAAGCCACCTGTCCCGAGTCCACCAAACATATTCATCAGCATATCT
rJMFF001I18- TTGGGTACACCCAAGCCACCTGTCCCGAGTCCACCAAACATATTCATCAGCATATCTAAG
                      ____________________________________________________________
consensus TTGGGTACACCCAAGCCACCTGTCCCGAGTCCACCAAACATATTCATCAGCATATCTAAG
 
. : . : . : . : . : . :
rJMFF001I18- CCCACATTATCAAGTGAACCTGGTCTGCCACTGTTTGGACCAGTTTCTTGATTTGTCTGC
JMFS135C02+ CTGGTCTGCCACTGTTTGGACCAGTTTCTTGATTTGTCTGC
                      ____________________________________________________________
consensus CCCACATTATCAAGTGAACCTGGTCTGCCACTGTTTGGACCAGTTTCTTGATTTGTCTGC
 
. : . : . : . : . : . :
rJMFF001I18- TGTCGACCCAATTGGGACATAAGTGATTGCTGAAATGTTAACAGTTGCTGCATTGTCTCA
JMFS135C02+ TGTCGACCCAATTGGGACATAAGTGATTGCTGAAATGTTAACAGTTGCTGCATTGTCTCA
                      ____________________________________________________________
consensus TGTCGACCCAATTGGGACATAAGTGATTGCTGAAATGTTAACAGTTGCTGCATTGTCTCA
 
. : . : . : . : . : . :
rJMFF001I18- GGGGAAGTCAATTGACGAATGAATTCAGGGTTTTGCATCATCTCTCTCAGTTGGGAATTG
JMFS135C02+ GGGGAAGTCAATTGACGAATGAATTCAGGGTTTTGCATCATCTCTCTCAGTTGGGAATTG
                      ____________________________________________________________
consensus GGGGAAGTCAATTGACGAATGAATTCAGGGTTTTGCATCATCTCTCTCAGTTGGGAATTG
 
. : . : . : . : . : . :
rJMFF001I18- GAGTCAAGCATGCTTCGCAGTTGTGGGTTGAGGCCAAGAATCTGGTTCATGTACTGAGGG
JMFS135C02+ GAGTCAAGCATGCTTCGCAGTTGTGGGTTGAGGCCAAGAATCTGGTTCATGTACTGAGGG
                      ____________________________________________________________
consensus GAGTCAAGCATGCTTCGCAGTTGTGGGTTGAGGCCAAGAATCTGGTTCATGTACTGAGGG
 
. : . : . : . : . : . :
JMFS135C02+ TTGGAGAGCATAGACTGCATCATCTGTGAGATAGCAGGATTCTGCATCAACTGATTTACT
JMFN025C14+ TGGAGAGCATAGACTGCATCATCTGTGAGATAGCAGGATTCTGCATCAACTGATTTACT
                      ____________________________________________________________
consensus TTGGAGAGCATAGACTGCATCATCTGTGAGATAGCAGGATTCTGCATCAACTGATTTACT
 
. : . : . : . : . : . :
JMFS135C02+ GCATTGGGATCTGGCATACCACCCAGAAGGTCTGGTAAACCAAGTCCACCTAAGCCACCA
JMFN025C14+ GCATTGGGATCTGGCATACCACCCAGAAGGTCTGGTAAACCAAGTCCACCTAAGCCACCA
                      ____________________________________________________________
consensus GCATTGGGATCTGGCATACCACCCAGAAGGTCTGGTAAACCAAGTCCACCTAAGCCACCA
 
. : . : . : . : . : . :
JMFS135C02+ AGTGGAGCTGCCCTAGCTTCCCCAGCAGGGGTTGACCTAGCGGTGGTATTAGTCTGTTCA
JMFN025C14+ AGTGGAGCTGCCCTAGCTTCCCCAGCAGGGGTTGACCTAGCGGTGGTATTAGTCTGTTCA
                      ____________________________________________________________
consensus AGTGGAGCTGCCCTAGCTTCCCCAGCAGGGGTTGACCTAGCGGTGGTATTAGTCTGTTCA
 
. : . : . : . : . : . :
JMFS135C02+ GCTCCAGC
JMFN025C14+ GCTCCAGCTGCAAAATCCAAATAAAGAAAAATGAGGTAATAAAGTAACCAAGAAAACTGA
                      ____________________________________________________________
consensus GCTCCAGCTGCAAAATCCAAATAAAGAAAAATGAGGTAATAAAGTAACCAAGAAAACTGA
 
. : . : . : . : . : . :
JMFN025C14+ TAAGAGCAGAAAATGCTATTAAAAGCTGTCAATCAATTCAGATATTTATGCTAAATGGAG
                      ____________________________________________________________
consensus TAAGAGCAGAAAATGCTATTAAAAGCTGTCAATCAATTCAGATATTTATGCTAAATGGAG
 
. : . : . : . : . : . :
JMFN025C14+ CAAGTAGCAATTAAAAATGCAGCAGCAATAAATATCTTTAGACTTTCTCTGATAAATAAT
                      ____________________________________________________________
consensus CAAGTAGCAATTAAAAATGCAGCAGCAATAAATATCTTTAGACTTTCTCTGATAAATAAT
 
. : . : . : . : . : . :
JMFN025C14+ TTATTTAGACTTCATTGATAATGCAGCATCCAATTCAACATCTCAACTGAAAGTTCAATG
                      ____________________________________________________________
consensus TTATTTAGACTTCATTGATAATGCAGCATCCAATTCAACATCTCAACTGAAAGTTCAATG
 
. : . : . : . : . : . :
JMFN025C14+ TATCCTGATGATTTCATCAAAAAAACTCTGAAAGCAGAGAAAAATGTGACAAGAGGTAAA
                      ____________________________________________________________
consensus TATCCTGATGATTTCATCAAAAAAACTCTGAAAGCAGAGAAAAATGTGACAAGAGGTAAA
 
. : . : . : . : . : . :
JMFN025C14+ TTATCAGGGATTGTAGATAGAAAGTCTAGAGCACTTGGCCTCCTCTGAATATCTACAAAT
                      ____________________________________________________________
consensus TTATCAGGGATTGTAGATAGAAAGTCTAGAGCACTTGGCCTCCTCTGAATATCTACAAAT
 
. : . : . : . : . : . :
JMFN025C14+ GACAGACATGCCAACAGCATCAATACTAATAGTGTATCTCAACTTTTGATACCAAGCTTA
                      ____________________________________________________________
consensus GACAGACATGCCAACAGCATCAATACTAATAGTGTATCTCAACTTTTGATACCAAGCTTA